RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 FAM205CA6NFA0 338 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 ACKR2O00590 384 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 SYN3O14994 580 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 APBB3O95704 486 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 EDN1P05305 212 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 RPS6KB1P23443 525 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 HOXA6P31267 233 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 HSPA4P34932 840 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 MCM2P49736 904 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 IRX4P78413 519 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 PLCB2Q00722 1185 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 YWHAHQ04917 246 aaPredicted RBP7.52□□□□□ -1.21
HDAC1-204ENST00000471488 SPAG1Q07617 926 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 BFSP1Q12934 665 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 DMC1Q14565 340 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 VEPH1Q14D04 833 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 COL28A1Q2UY09 1125 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 SEZ6Q53EL9 994 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 USP39Q53GS9 565 aaKnown RBP7.52□□□□□ -1.21
HDAC1-204ENST00000471488 ANO7Q6IWH7 933 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 FSTL4Q6MZW2 842 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 CC2D1AQ6P1N0 951 aaPredicted RBP7.52□□□□□ -1.21
HDAC1-204ENST00000471488 CD300LGQ6UXG3 332 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 DSTYKQ6XUX3 929 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 PDZD3Q86UT5 571 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 SKAP1Q86WV1 359 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 TMEM130Q8N3G9 435 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 CHCHD4Q8N4Q1 142 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 DAGLBQ8NCG7 672 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 MCPH1Q8NEM0 835 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 TSTD1Q8NFU3 115 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 GIPC2Q8TF65 315 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 BSNDQ8WZ55 320 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 DDX12PQ92771 950 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 CHFRQ96EP1 664 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 LRIG1Q96JA1 1093 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 ZC3H10Q96K80 434 aaKnown RBP7.52□□□□□ -1.21
HDAC1-204ENST00000471488 NAP1L4Q99733 375 aaKnown RBP7.52□□□□□ -1.21
HDAC1-204ENST00000471488 NUSAP1Q9BXS6 441 aaKnown RBP7.52□□□□□ -1.21
HDAC1-204ENST00000471488 FZD8Q9H461 694 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 FSCN3Q9NQT6 498 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 GJB4Q9NTQ9 266 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 FASNP49327 2511 aaKnown RBP7.52□□□□□ -1.21
HDAC1-204ENST00000471488 LAMA1P25391 3075 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 K7ERI5 159 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 M0R2N6 131 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 TAF4O00268 1085 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 AKAP3O75969 853 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 ARSAP15289 507 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 CSRP1P21291 193 aaKnown RBP7.51□□□□□ -1.21
HDAC1-204ENST00000471488 BCKDHBP21953 392 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 AVPR1AP37288 418 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 GALK1P51570 392 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 MLLT6P55198 1093 aaPredicted RBP7.51□□□□□ -1.21
HDAC1-204ENST00000471488 AMPD2Q01433 879 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 CACNB1Q02641 598 aaPredicted RBP7.51□□□□□ -1.21
HDAC1-204ENST00000471488 RUNX3Q13761 415 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 PPP2R5AQ15172 486 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 FAM187BQ17R55 369 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 MGAT5BQ3V5L5 792 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 C2orf27AQ580R0 203 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 TRIM61Q5EBN2 209 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 NT5DC1Q5TFE4 455 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 CDCA2Q69YH5 1023 aaPredicted RBP7.51□□□□□ -1.21
HDAC1-204ENST00000471488 NAIF1Q69YI7 327 aaPredicted RBP7.51□□□□□ -1.21
HDAC1-204ENST00000471488 GALNT17Q6IS24 598 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 ARMCX5Q6P1M9 558 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 PADI6Q6TGC4 694 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 GAREM2Q75VX8 874 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 DNAJB7Q7Z6W7 309 aaPredicted RBP7.51□□□□□ -1.21
HDAC1-204ENST00000471488 TMC8Q8IU68 726 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 PGBD3Q8N328 593 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 HDDC3Q8N4P3 179 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 CAMKK1Q8N5S9 505 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 DEFB119Q8N690 84 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 TTC9BQ8N6N2 239 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 MAB21L3Q8N8X9 362 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 ATAD1Q8NBU5 361 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 EXOC4Q96A65 974 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 ZMAT2Q96NC0 199 aaKnown RBP7.51□□□□□ -1.21
HDAC1-204ENST00000471488 NACC1Q96RE7 527 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 P2RY13Q9BPV8 354 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 LPIN3Q9BQK8 851 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 POLR3CQ9BUI4 534 aaPredicted RBP7.51□□□□□ -1.21
HDAC1-204ENST00000471488 TMEM121BQ9BXQ6 578 aaPredicted RBP7.51□□□□□ -1.21
HDAC1-204ENST00000471488 TRPC7Q9HCX4 862 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 BCCIPQ9P287 314 aaKnown RBP eCLIP7.51□□□□□ -1.21
HDAC1-204ENST00000471488 ANKFY1Q9P2R3 1169 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 TUBGCP4Q9UGJ1 667 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 TPCN1Q9ULQ1 816 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 MAGED2Q9UNF1 606 aaPredicted RBP7.51□□□□□ -1.21
HDAC1-204ENST00000471488 MSRB2Q9Y3D2 182 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 NEUROG3Q9Y4Z2 214 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 SNX14Q9Y5W7 946 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 NBEAQ8NFP9 2946 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 PKD1L2Q7Z442 2459 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 AKAP13Q12802 2813 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 WDFY3Q8IZQ1 3526 aa7.51□□□□□ -1.21
HDAC1-204ENST00000471488 SPAG17Q6Q759 2223 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms