RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 PRLRP16471 622 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 ABCB4P21439 1286 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 LRPAP1P30533 357 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 PNPLA4P41247 253 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 RAP1GAPP47736 663 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 CDK7P50613 346 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 NAP1L1P55209 391 aaKnown RBP10.01□□□□□ -0.81
VPS52-216ENST00000471309 NOMO3P69849 1222 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 GPC5P78333 572 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 WHAMMP3Q1A5X7 153 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 FAM43BQ6ZT52 329 aaPredicted RBP10.01□□□□□ -0.81
VPS52-216ENST00000471309 SLFN11Q7Z7L1 901 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 DNAAF5Q86Y56 855 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 FAM126BQ8IXS8 530 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 SYCE1Q8N0S2 351 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 TMEM130Q8N3G9 435 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 LRRC57Q8N9N7 239 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 TPCN2Q8NHX9 752 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 ARHGEF26Q96DR7 871 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 DEFB118Q96PH6 123 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 PPP1R10Q96QC0 940 aaKnown RBP10.01□□□□□ -0.81
VPS52-216ENST00000471309 PDCL3Q9H2J4 239 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 SMYD3Q9H7B4 428 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 SLC38A7Q9NVC3 462 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 KLK14Q9P0G3 267 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 SNX12Q9UMY4 172 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 PCDHGC3Q9UN70 934 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 GIT1Q9Y2X7 761 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 SAR1BQ9Y6B6 198 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 TRIP11Q15643 1979 aa10.01□□□□□ -0.81
VPS52-216ENST00000471309 A0A0U1RQF3 1178 aa10□□□□□ -0.81
VPS52-216ENST00000471309 PPEF2O14830 753 aa10□□□□□ -0.81
VPS52-216ENST00000471309 MED7O43513 233 aa10□□□□□ -0.81
VPS52-216ENST00000471309 MGEA5O60502 916 aa10□□□□□ -0.81
VPS52-216ENST00000471309 CALCAP01258 141 aa10□□□□□ -0.81
VPS52-216ENST00000471309 CYP1A2P05177 515 aa10□□□□□ -0.81
VPS52-216ENST00000471309 TCP1P17987 556 aaKnown RBP10□□□□□ -0.81
VPS52-216ENST00000471309 CDH5P33151 784 aaPredicted RBP10□□□□□ -0.81
VPS52-216ENST00000471309 MLH1P40692 756 aa10□□□□□ -0.81
VPS52-216ENST00000471309 NOP2P46087 812 aaKnown RBP10□□□□□ -0.81
VPS52-216ENST00000471309 NSFP46459 744 aaKnown RBP10□□□□□ -0.81
VPS52-216ENST00000471309 TAF6P49848 677 aa10□□□□□ -0.81
VPS52-216ENST00000471309 RAD23BP54727 409 aa10□□□□□ -0.81
VPS52-216ENST00000471309 SOX4Q06945 474 aaPredicted RBP10□□□□□ -0.81
VPS52-216ENST00000471309 MTFR1Q15390 333 aa10□□□□□ -0.81
VPS52-216ENST00000471309 SV2CQ496J9 727 aa10□□□□□ -0.81
VPS52-216ENST00000471309 MEI1Q5TIA1 1274 aa10□□□□□ -0.81
VPS52-216ENST00000471309 NAA35Q5VZE5 725 aa10□□□□□ -0.81
VPS52-216ENST00000471309 C11orf63Q6NUN7 778 aa10□□□□□ -0.81
VPS52-216ENST00000471309 MON1BQ7L1V2 547 aa10□□□□□ -0.81
VPS52-216ENST00000471309 PHF13Q86YI8 300 aaPredicted RBP10□□□□□ -0.81
VPS52-216ENST00000471309 CEP112Q8N8E3 955 aa10□□□□□ -0.81
VPS52-216ENST00000471309 MNS1Q8NEH6 495 aa10□□□□□ -0.81
VPS52-216ENST00000471309 SLC35G2Q8TBE7 412 aa10□□□□□ -0.81
VPS52-216ENST00000471309 WHAMMQ8TF30 809 aa10□□□□□ -0.81
VPS52-216ENST00000471309 ZNF606Q8WXB4 792 aa10□□□□□ -0.81
VPS52-216ENST00000471309 ZNF653Q96CK0 615 aa10□□□□□ -0.81
VPS52-216ENST00000471309 PGBD4Q96DM1 585 aa10□□□□□ -0.81
VPS52-216ENST00000471309 VCPIP1Q96JH7 1222 aa10□□□□□ -0.81
VPS52-216ENST00000471309 RPS6KC1Q96S38 1066 aa10□□□□□ -0.81
VPS52-216ENST00000471309 ZSWIM1Q9BR11 485 aa10□□□□□ -0.81
VPS52-216ENST00000471309 TLR10Q9BXR5 811 aa10□□□□□ -0.81
VPS52-216ENST00000471309 OSBPL7Q9BZF2 842 aa10□□□□□ -0.81
VPS52-216ENST00000471309 ZNF518BQ9C0D4 1074 aa10□□□□□ -0.81
VPS52-216ENST00000471309 UBN1Q9NPG3 1134 aa10□□□□□ -0.81
VPS52-216ENST00000471309 AVENQ9NQS1 362 aaPredicted RBP10□□□□□ -0.81
VPS52-216ENST00000471309 GDAP2Q9NXN4 497 aa10□□□□□ -0.81
VPS52-216ENST00000471309 UVRAGQ9P2Y5 699 aa10□□□□□ -0.81
VPS52-216ENST00000471309 BARX2Q9UMQ3 279 aaPredicted RBP10□□□□□ -0.81
VPS52-216ENST00000471309 COG5Q9UP83 839 aa10□□□□□ -0.81
VPS52-216ENST00000471309 HYOU1Q9Y4L1 999 aa10□□□□□ -0.81
VPS52-216ENST00000471309 PITPNM1O00562 1244 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 INPPL1O15357 1258 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 SELPP16109 830 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 BRD2P25440 801 aaKnown RBP9.99□□□□□ -0.81
VPS52-216ENST00000471309 CDH8P55286 799 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 C1QBPQ07021 282 aaKnown RBP9.99□□□□□ -0.81
VPS52-216ENST00000471309 CKAP4Q07065 602 aaKnown RBP9.99□□□□□ -0.81
VPS52-216ENST00000471309 BFSP2Q13515 415 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 MBTPS1Q14703 1052 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 AGMOQ6ZNB7 445 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 LRRC8DQ7L1W4 858 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 LIMS2Q7Z4I7 341 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 PASD1Q8IV76 773 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 MCOLN2Q8IZK6 566 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 SLC4A11Q8NBS3 891 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 GSTCDQ8NEC7 633 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 UBE2Q2Q8WVN8 375 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 TFAP2BQ92481 460 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 CYFIP2Q96F07 1278 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 TMEM176AQ96HP8 235 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 ZFP42Q96MM3 310 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 TWNKQ96RR1 684 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 ADAM2Q99965 735 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 CARD6Q9BX69 1037 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 ELOVL4Q9GZR5 314 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 CRISPLD2Q9H0B8 497 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 RNF208Q9H0X6 261 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 LHX5Q9H2C1 402 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 RSAD1Q9HA92 442 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms