RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 CACNA1HO95180 2353 aa14.6□□□□□ -0.07
HMGN1-211ENST00000471260 RFX1P22670 979 aa14.59□□□□□ -0.07
HMGN1-211ENST00000471260 TAF6P49848 677 aa14.59□□□□□ -0.07
HMGN1-211ENST00000471260 GUCY2FP51841 1108 aa14.59□□□□□ -0.07
HMGN1-211ENST00000471260 EPHA5P54756 1037 aa14.59□□□□□ -0.07
HMGN1-211ENST00000471260 KCNA1Q09470 495 aa14.59□□□□□ -0.07
HMGN1-211ENST00000471260 CCDC173Q0VFZ6 552 aa14.59□□□□□ -0.07
HMGN1-211ENST00000471260 TWF1Q12792 350 aa14.59□□□□□ -0.07
HMGN1-211ENST00000471260 SMARCB1Q12824 385 aa14.59□□□□□ -0.07
HMGN1-211ENST00000471260 E2F4Q16254 413 aa14.59□□□□□ -0.07
HMGN1-211ENST00000471260 SLC5A9Q2M3M2 681 aa14.59□□□□□ -0.07
HMGN1-211ENST00000471260 CACTINQ8WUQ7 758 aaKnown RBP14.59□□□□□ -0.07
HMGN1-211ENST00000471260 ANP32BQ92688 251 aaKnown RBP14.59□□□□□ -0.07
HMGN1-211ENST00000471260 CORO1BQ9BR76 489 aa14.59□□□□□ -0.07
HMGN1-211ENST00000471260 RPP25Q9BUL9 199 aaKnown RBP14.59□□□□□ -0.07
HMGN1-211ENST00000471260 GPR88Q9GZN0 384 aa14.59□□□□□ -0.07
HMGN1-211ENST00000471260 GZF1Q9H116 711 aaPredicted RBP14.59□□□□□ -0.07
HMGN1-211ENST00000471260 MAGEF1Q9HAY2 307 aa14.59□□□□□ -0.07
HMGN1-211ENST00000471260 CFAP45Q9UL16 551 aa14.59□□□□□ -0.07
HMGN1-211ENST00000471260 STK25O00506 426 aa14.58□□□□□ -0.08
HMGN1-211ENST00000471260 PPEF2O14830 753 aa14.58□□□□□ -0.08
HMGN1-211ENST00000471260 SPTLC1O15269 473 aa14.58□□□□□ -0.08
HMGN1-211ENST00000471260 F13A1P00488 732 aa14.58□□□□□ -0.08
HMGN1-211ENST00000471260 PNPLA4P41247 253 aa14.58□□□□□ -0.08
HMGN1-211ENST00000471260 CASP5P51878 434 aa14.58□□□□□ -0.08
HMGN1-211ENST00000471260 STARD6P59095 220 aa14.58□□□□□ -0.08
HMGN1-211ENST00000471260 GPC5P78333 572 aa14.58□□□□□ -0.08
HMGN1-211ENST00000471260 SV2CQ496J9 727 aa14.58□□□□□ -0.08
HMGN1-211ENST00000471260 METTL23Q86XA0 190 aa14.58□□□□□ -0.08
HMGN1-211ENST00000471260 BRSK2Q8IWQ3 736 aa14.58□□□□□ -0.08
HMGN1-211ENST00000471260 CCDC105Q8IYK2 499 aa14.58□□□□□ -0.08
HMGN1-211ENST00000471260 THEM5Q8N1Q8 247 aa14.58□□□□□ -0.08
HMGN1-211ENST00000471260 ATOH1Q92858 354 aaPredicted RBP14.58□□□□□ -0.08
HMGN1-211ENST00000471260 ELSPBP1Q96BH3 223 aa14.58□□□□□ -0.08
HMGN1-211ENST00000471260 ZNF560Q96MR9 790 aa14.58□□□□□ -0.08
HMGN1-211ENST00000471260 PYM1Q9BRP8 204 aaKnown RBP14.58□□□□□ -0.08
HMGN1-211ENST00000471260 FAM213AQ9BRX8 229 aa14.58□□□□□ -0.08
HMGN1-211ENST00000471260 TRIM9Q9C026 710 aa14.58□□□□□ -0.08
HMGN1-211ENST00000471260 TBC1D17Q9HA65 648 aa14.58□□□□□ -0.08
HMGN1-211ENST00000471260 ASAH2Q9NR71 780 aa14.58□□□□□ -0.08
HMGN1-211ENST00000471260 CA14Q9ULX7 337 aa14.58□□□□□ -0.08
HMGN1-211ENST00000471260 ASB3Q9Y575 518 aa14.58□□□□□ -0.08
HMGN1-211ENST00000471260 ANK1P16157 1881 aa14.57□□□□□ -0.08
HMGN1-211ENST00000471260 MYH15Q9Y2K3 1946 aa14.57□□□□□ -0.08
HMGN1-211ENST00000471260 PROB1E7EW31 1015 aa14.57□□□□□ -0.08
HMGN1-211ENST00000471260 H0Y858 1186 aa14.57□□□□□ -0.08
HMGN1-211ENST00000471260 CYB561D2O14569 222 aa14.57□□□□□ -0.08
HMGN1-211ENST00000471260 EIF3DO15371 548 aaKnown RBP eCLIP14.57□□□□□ -0.08
HMGN1-211ENST00000471260 PI15O43692 258 aa14.57□□□□□ -0.08
HMGN1-211ENST00000471260 EXTL3O43909 919 aa14.57□□□□□ -0.08
HMGN1-211ENST00000471260 ALDH1A3P47895 512 aa14.57□□□□□ -0.08
HMGN1-211ENST00000471260 EPHB3P54753 998 aa14.57□□□□□ -0.08
HMGN1-211ENST00000471260 PRKCQQ04759 706 aa14.57□□□□□ -0.08
HMGN1-211ENST00000471260 DUSP4Q13115 394 aa14.57□□□□□ -0.08
HMGN1-211ENST00000471260 CENPPQ6IPU0 288 aa14.57□□□□□ -0.08
HMGN1-211ENST00000471260 SHC4Q6S5L8 630 aa14.57□□□□□ -0.08
HMGN1-211ENST00000471260 EFCAB13Q8IY85 973 aa14.57□□□□□ -0.08
HMGN1-211ENST00000471260 TMEM130Q8N3G9 435 aa14.57□□□□□ -0.08
HMGN1-211ENST00000471260 C2orf15Q8WU43 125 aaKnown RBP14.57□□□□□ -0.08
HMGN1-211ENST00000471260 ING5Q8WYH8 240 aa14.57□□□□□ -0.08
HMGN1-211ENST00000471260 MCRS1Q96EZ8 462 aa14.57□□□□□ -0.08
HMGN1-211ENST00000471260 C7orf25Q9BPX7 421 aa14.57□□□□□ -0.08
HMGN1-211ENST00000471260 IKZF4Q9H2S9 585 aa14.57□□□□□ -0.08
HMGN1-211ENST00000471260 ZFP14Q9HCL3 533 aa14.57□□□□□ -0.08
HMGN1-211ENST00000471260 LMBRD1Q9NUN5 540 aa14.57□□□□□ -0.08
HMGN1-211ENST00000471260 RBAKQ9NYW8 714 aaPredicted RBP14.57□□□□□ -0.08
HMGN1-211ENST00000471260 CEP72Q9P209 647 aa14.57□□□□□ -0.08
HMGN1-211ENST00000471260 SIT1Q9Y3P8 196 aa14.57□□□□□ -0.08
HMGN1-211ENST00000471260 YIPF1Q9Y548 306 aa14.57□□□□□ -0.08
HMGN1-211ENST00000471260 MTMR11A4FU01 709 aa14.56□□□□□ -0.08
HMGN1-211ENST00000471260 KPNA7A9QM74 516 aa14.56□□□□□ -0.08
HMGN1-211ENST00000471260 VNN2O95498 520 aa14.56□□□□□ -0.08
HMGN1-211ENST00000471260 FGF19O95750 216 aa14.56□□□□□ -0.08
HMGN1-211ENST00000471260 OR4Q2P0C623 313 aa14.56□□□□□ -0.08
HMGN1-211ENST00000471260 CEBPBP17676 345 aa14.56□□□□□ -0.08
HMGN1-211ENST00000471260 CLCN1P35523 988 aa14.56□□□□□ -0.08
HMGN1-211ENST00000471260 TUFMP49411 452 aaKnown RBP14.56□□□□□ -0.08
HMGN1-211ENST00000471260 SNRPFP62306 86 aaKnown RBP14.56□□□□□ -0.08
HMGN1-211ENST00000471260 SURF1Q15526 300 aa14.56□□□□□ -0.08
HMGN1-211ENST00000471260 GPD1LQ8N335 351 aa14.56□□□□□ -0.08
HMGN1-211ENST00000471260 LRRC52Q8N7C0 313 aa14.56□□□□□ -0.08
HMGN1-211ENST00000471260 DTWD2Q8NBA8 298 aa14.56□□□□□ -0.08
HMGN1-211ENST00000471260 SYAP1Q96A49 352 aaPredicted RBP14.56□□□□□ -0.08
HMGN1-211ENST00000471260 DHX58Q96C10 678 aa14.56□□□□□ -0.08
HMGN1-211ENST00000471260 SAAL1Q96ER3 474 aa14.56□□□□□ -0.08
HMGN1-211ENST00000471260 BORCS6Q96GS4 357 aa14.56□□□□□ -0.08
HMGN1-211ENST00000471260 PGLYRP2Q96PD5 576 aa14.56□□□□□ -0.08
HMGN1-211ENST00000471260 KXD1Q9BQD3 176 aa14.56□□□□□ -0.08
HMGN1-211ENST00000471260 OSBPL6Q9BZF3 934 aa14.56□□□□□ -0.08
HMGN1-211ENST00000471260 ZCWPW1Q9H0M4 648 aa14.56□□□□□ -0.08
HMGN1-211ENST00000471260 TRPV4Q9HBA0 871 aa14.56□□□□□ -0.08
HMGN1-211ENST00000471260 KIAA1586Q9HCI6 787 aa14.56□□□□□ -0.08
HMGN1-211ENST00000471260 FAM13BQ9NYF5 915 aa14.56□□□□□ -0.08
HMGN1-211ENST00000471260 ITGA11Q9UKX5 1188 aa14.56□□□□□ -0.08
HMGN1-211ENST00000471260 SCN1AP35498 2009 aa14.56□□□□□ -0.08
HMGN1-211ENST00000471260 PRPF6O94906 941 aaKnown RBP14.55□□□□□ -0.08
HMGN1-211ENST00000471260 NBL1P41271 181 aa14.55□□□□□ -0.08
HMGN1-211ENST00000471260 CCR2P41597 374 aa14.55□□□□□ -0.08
HMGN1-211ENST00000471260 TFAMQ00059 246 aaKnown RBP14.55□□□□□ -0.08
HMGN1-211ENST00000471260 MLF2Q15773 248 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms