RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 PRELID2Q8N945 189 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 GLIS3Q8NEA6 775 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 GDPD5Q8WTR4 605 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 ALG3Q92685 438 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 LRRC59Q96AG4 307 aaKnown RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 VPS50Q96JG6 964 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 COX4I2Q96KJ9 171 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 PRICKLE1Q96MT3 831 aaPredicted RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 STRBPQ96SI9 672 aaKnown RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 OSBPL8Q9BZF1 889 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 CRNKL1Q9BZJ0 848 aaKnown RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 RNF41Q9H4P4 317 aaPredicted RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 PLGRKTQ9HBL7 147 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 SLAIN2Q9P270 581 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 PPARGC1AQ9UBK2 798 aaKnown RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 DMTF1Q9Y222 760 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 MAD1L1Q9Y6D9 718 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 AK5Q9Y6K8 562 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 BCL9O00512 1426 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 ADAMTS13Q76LX8 1427 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 PEAK1Q9H792 1746 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 RTL9Q8NET4 1388 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 THSD7AQ9UPZ6 1657 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 MYH3P11055 1940 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 SYNGAP1Q96PV0 1343 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 KANSL1LA0AUZ9 987 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 SH3PXD2BA1X283 911 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 TTC24A2A3L6 582 aaPredicted RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 IQCA1LA6NCM1 817 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 E9PBE3 544 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 IRS4O14654 1257 aaPredicted RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 XPO1O14980 1071 aaKnown RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 MCF2LO15068 1137 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 ADAMTS3O15072 1205 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 WDR46O15213 610 aaKnown RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 CYP26A1O43174 497 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 KDM1AO60341 852 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 FOXD2O60548 495 aaPredicted RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 ADAM23O75077 832 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 TFAP2AP05549 437 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 CETPP11597 493 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 SCG2P13521 617 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 SLC5A2P31639 672 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 CIITAP33076 1130 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 VCPP55072 806 aaKnown RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 NCKAP1LP55160 1127 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 KRT17Q04695 432 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 KCNH2Q12809 1159 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 MESDQ14696 234 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 ZYXQ15942 572 aaKnown RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 CNGA3Q16281 694 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 PDK4Q16654 411 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 LINC01559Q495D7 138 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 PLEKHG4Q58EX7 1191 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 MAP3K21Q5TCX8 1036 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 ITPRIPL1Q6GPH6 555 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 PACS1Q6VY07 963 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 ARHGAP27Q6ZUM4 889 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 DHDDSQ86SQ9 333 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 PDSS2Q86YH6 399 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 GLYCTKQ8IVS8 523 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 RAVER1Q8IY67 606 aaKnown RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 BLIDQ8IZY5 108 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 TTC5Q8N0Z6 440 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 BBS5Q8N3I7 341 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 ZNF713Q8N859 430 aaPredicted RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 GSTCDQ8NEC7 633 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 RIN3Q8TB24 985 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 PPP4R1Q8TF05 950 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 LRRC15Q8TF66 581 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 C1orf54Q8WWF1 131 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 IRGQQ8WZA9 623 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 ZNF75CPQ92670 426 aaPredicted RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 USP6NLQ92738 828 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 PPP1R10Q96QC0 940 aaKnown RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 PANX3Q96QZ0 392 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 RBM15Q96T37 977 aaKnown RBP eCLIP4.45□□□□□ -1.7
VPS50-210ENST00000471188 FHDC1Q9C0D6 1143 aaPredicted RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 CCSER1Q9C0I3 900 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 TPK1Q9H3S4 243 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 EPB41L4AQ9HCS5 686 aaPredicted RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 PIH1D3Q9NQM4 214 aaKnown RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 MRGBPQ9NV56 204 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 RABL2AQ9UBK7 228 aaPredicted RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 CHORDC1Q9UHD1 332 aaPredicted RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 ASAP1Q9ULH1 1129 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 TELO2Q9Y4R8 837 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 PLCH1Q4KWH8 1693 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 TMEM94Q12767 1356 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 MYPNQ86TC9 1320 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 FUOMA2VDF0 154 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 CAPN8A6NHC0 703 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 TRIM64CA6NLI5 447 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 KLRF2D3W0D1 207 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 GOLGA8RI6L899 631 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 SPOPO43791 374 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 CCNT1O60563 726 aaKnown RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 ZBED1O96006 694 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 UCHL3P15374 230 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 CDH3P22223 829 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms