RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 UGCGQ16739 394 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 UVSSAQ2YD98 709 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 CEP55Q53EZ4 464 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 C1orf228Q6PIY5 440 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 CATSPER4Q7RTX7 472 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 C11orf74Q86VG3 221 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 ERICH1Q86X53 443 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 GPR65Q8IYL9 337 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 HS6ST3Q8IZP7 471 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 SPRYD3Q8NCJ5 442 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 CSGALNACT1Q8TDX6 532 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 FGF11Q92914 225 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 SMARCD2Q92925 531 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 CHFRQ96EP1 664 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 MSANTD3Q96H12 275 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 CEP89Q96ST8 783 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 LGMNQ99538 433 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 LPIN3Q9BQK8 851 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 COLEC11Q9BWP8 271 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 EIF2AQ9BY44 585 aaKnown RBP6.5□□□□□ -1.37
VARS-222ENST00000470953 SLKQ9H2G2 1235 aaPredicted RBP6.5□□□□□ -1.37
VARS-222ENST00000470953 C8orf33Q9H7E9 229 aaPredicted RBP6.5□□□□□ -1.37
VARS-222ENST00000470953 MINDY3Q9H8M7 445 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 UPF2Q9HAU5 1272 aaKnown RBP6.5□□□□□ -1.37
VARS-222ENST00000470953 PRDM16Q9HAZ2 1276 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 CAPN10Q9HC96 672 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 NCOA5Q9HCD5 579 aaKnown RBP6.5□□□□□ -1.37
VARS-222ENST00000470953 FBRSL1Q9HCM7 1045 aaKnown RBP6.5□□□□□ -1.37
VARS-222ENST00000470953 RIC8AQ9NPQ8 531 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 AVENQ9NQS1 362 aaPredicted RBP6.5□□□□□ -1.37
VARS-222ENST00000470953 STARD5Q9NSY2 213 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 AGPAT5Q9NUQ2 364 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 BARHL2Q9NY43 387 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 EBF1Q9UH73 591 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 PILRBQ9UKJ0 227 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 MED13LQ71F56 2210 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 CNTNAP2Q9UHC6 1331 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 ANKHD1Q8IWZ3 2542 aaKnown RBP6.49□□□□□ -1.37
VARS-222ENST00000470953 NBEAL1Q6ZS30 2694 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 TDRD15B5MCY1 1934 aaKnown RBP6.49□□□□□ -1.37
VARS-222ENST00000470953 FAM86B1E9PN63 330 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 ARHGAP33O14559 1287 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 TNFRSF10BO14763 440 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 APBB3O95704 486 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 FAM86B2P0C5J1 330 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 ITGA4P13612 1032 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 PTPN2P17706 415 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 XBP1P17861 261 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 ITGB6P18564 788 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 ITPKAP23677 461 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 CDC27P30260 824 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 ADD1P35611 737 aaKnown RBP6.49□□□□□ -1.37
VARS-222ENST00000470953 DCTP40126 519 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 NLRP5P59047 1200 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 CREMQ03060 361 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 TARBP2Q15633 366 aaKnown RBP6.49□□□□□ -1.37
VARS-222ENST00000470953 PFKFB3Q16875 520 aaPredicted RBP6.49□□□□□ -1.37
VARS-222ENST00000470953 CCDC157Q569K6 752 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 C6orf118Q5T5N4 469 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 FAM171A1Q5VUB5 890 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 PEAR1Q5VY43 1037 aaPredicted RBP6.49□□□□□ -1.37
VARS-222ENST00000470953 JAKMIP3Q5VZ66 844 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 NAIF1Q69YI7 327 aaPredicted RBP6.49□□□□□ -1.37
VARS-222ENST00000470953 FSTL4Q6MZW2 842 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 DHRS13Q6UX07 377 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 RALGPS2Q86X27 583 aaPredicted RBP6.49□□□□□ -1.37
VARS-222ENST00000470953 TEX2Q8IWB9 1127 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 FRMD1Q8N878 549 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 ZSCAN18Q8TBC5 510 aaPredicted RBP6.49□□□□□ -1.37
VARS-222ENST00000470953 BAHD1Q8TBE0 780 aaPredicted RBP6.49□□□□□ -1.37
VARS-222ENST00000470953 FAM200AQ8TCP9 573 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 SETD7Q8WTS6 366 aaKnown RBP6.49□□□□□ -1.37
VARS-222ENST00000470953 DEPDC1BQ8WUY9 529 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 KCNB2Q92953 911 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 NLRP4Q96MN2 994 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 TTPALQ9BTX7 342 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.49□□□□□ -1.37
VARS-222ENST00000470953 APOL6Q9BWW8 343 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 RNF26Q9BY78 433 aaPredicted RBP6.49□□□□□ -1.37
VARS-222ENST00000470953 TM6SF1Q9BZW5 370 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 TRPV4Q9HBA0 871 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 IFT122Q9HBG6 1241 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 ZSWIM6Q9HCJ5 1215 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 CEP131Q9UPN4 1083 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 IPPQ9Y573 584 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 SVILO95425 2214 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 CABIN1Q9Y6J0 2220 aa6.49□□□□□ -1.37
VARS-222ENST00000470953 IGLV3-22A0A075B6J6 115 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 ESYT2A0FGR8 921 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 ANTXRLA6NF34 631 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 OTOL1A6NHN0 477 aaPredicted RBP6.48□□□□□ -1.37
VARS-222ENST00000470953 CHADO15335 359 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 PRPF3O43395 683 aaKnown RBP6.48□□□□□ -1.37
VARS-222ENST00000470953 BRINP1O60477 761 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 ATG13O75143 517 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 RNF40O75150 1001 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 TADA2AO75478 443 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 KIF4AO95239 1232 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 DEXIO95424 95 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 SEC24AO95486 1093 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms