RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 MYL1P05976 194 aa16.94■□□□□ 0.3
HDAC6-218ENST00000470942 KRT19P08727 400 aa16.94■□□□□ 0.3
HDAC6-218ENST00000470942 POU2F2P09086 479 aa16.94■□□□□ 0.3
HDAC6-218ENST00000470942 POLR2BP30876 1174 aaKnown RBP16.94■□□□□ 0.3
HDAC6-218ENST00000470942 SNRPFP62306 86 aaKnown RBP16.94■□□□□ 0.3
HDAC6-218ENST00000470942 STK4Q13043 487 aa16.94■□□□□ 0.3
HDAC6-218ENST00000470942 PSMD2Q13200 908 aa16.94■□□□□ 0.3
HDAC6-218ENST00000470942 BMT2Q1RMZ1 405 aa16.94■□□□□ 0.3
HDAC6-218ENST00000470942 PABPC1LQ4VXU2 614 aaKnown RBP16.94■□□□□ 0.3
HDAC6-218ENST00000470942 LMBRD2Q68DH5 695 aaPredicted RBP16.94■□□□□ 0.3
HDAC6-218ENST00000470942 HFE2Q6ZVN8 426 aa16.94■□□□□ 0.3
HDAC6-218ENST00000470942 UBALD2Q8IYN6 164 aa16.94■□□□□ 0.3
HDAC6-218ENST00000470942 C1orf127Q8N9H9 656 aa16.94■□□□□ 0.3
HDAC6-218ENST00000470942 CCDC47Q96A33 483 aaKnown RBP16.94■□□□□ 0.3
HDAC6-218ENST00000470942 ANKRD36BP1Q96IX9 119 aa16.94■□□□□ 0.3
HDAC6-218ENST00000470942 FAM84AQ96KN4 292 aa16.94■□□□□ 0.3
HDAC6-218ENST00000470942 GOLPH3LQ9H4A5 285 aa16.94■□□□□ 0.3
HDAC6-218ENST00000470942 KCNK12Q9HB15 430 aa16.94■□□□□ 0.3
HDAC6-218ENST00000470942 DNMT3BQ9UBC3 853 aaKnown RBP16.94■□□□□ 0.3
HDAC6-218ENST00000470942 DSEQ9UL01 958 aa16.94■□□□□ 0.3
HDAC6-218ENST00000470942 R3HCC1Q9Y3T6 440 aaKnown RBP16.94■□□□□ 0.3
HDAC6-218ENST00000470942 INSL5Q9Y5Q6 135 aa16.94■□□□□ 0.3
HDAC6-218ENST00000470942 NOTCH4Q99466 2003 aa16.94■□□□□ 0.3
HDAC6-218ENST00000470942 GOLGA6L4A6NEF3 574 aa16.93■□□□□ 0.3
HDAC6-218ENST00000470942 TNNC2P02585 160 aa16.93■□□□□ 0.3
HDAC6-218ENST00000470942 RPN1P04843 607 aaKnown RBP16.93■□□□□ 0.3
HDAC6-218ENST00000470942 LAMP2P13473 410 aa16.93■□□□□ 0.3
HDAC6-218ENST00000470942 PTPN2P17706 415 aa16.93■□□□□ 0.3
HDAC6-218ENST00000470942 PNPLA4P41247 253 aa16.93■□□□□ 0.3
HDAC6-218ENST00000470942 MYBPC2Q14324 1141 aa16.93■□□□□ 0.3
HDAC6-218ENST00000470942 SNRNP35Q16560 246 aaKnown RBP16.93■□□□□ 0.3
HDAC6-218ENST00000470942 KNOP1Q1ED39 458 aaKnown RBP16.93■□□□□ 0.3
HDAC6-218ENST00000470942 KRBA2Q6ZNG9 492 aa16.93■□□□□ 0.3
HDAC6-218ENST00000470942 THEM5Q8N1Q8 247 aa16.93■□□□□ 0.3
HDAC6-218ENST00000470942 XXYLT1Q8NBI6 393 aa16.93■□□□□ 0.3
HDAC6-218ENST00000470942 PBXIP1Q96AQ6 731 aa16.93■□□□□ 0.3
HDAC6-218ENST00000470942 PGLYRP2Q96PD5 576 aa16.93■□□□□ 0.3
HDAC6-218ENST00000470942 MTMR12Q9C0I1 747 aa16.93■□□□□ 0.3
HDAC6-218ENST00000470942 SMOC2Q9H3U7 446 aa16.93■□□□□ 0.3
HDAC6-218ENST00000470942 INTS13Q9NVM9 706 aa16.93■□□□□ 0.3
HDAC6-218ENST00000470942 IGSF9Q9P2J2 1179 aa16.93■□□□□ 0.3
HDAC6-218ENST00000470942 CGNQ9P2M7 1197 aaKnown RBP16.93■□□□□ 0.3
HDAC6-218ENST00000470942 EPS15L1Q9UBC2 864 aa16.93■□□□□ 0.3
HDAC6-218ENST00000470942 ITGA11Q9UKX5 1188 aa16.93■□□□□ 0.3
HDAC6-218ENST00000470942 MAFFQ9ULX9 164 aa16.93■□□□□ 0.3
HDAC6-218ENST00000470942 ZNF202O95125 648 aa16.92■□□□□ 0.3
HDAC6-218ENST00000470942 CYP11A1P05108 521 aa16.92■□□□□ 0.3
HDAC6-218ENST00000470942 PRR29P0C7W0 189 aa16.92■□□□□ 0.3
HDAC6-218ENST00000470942 RBP5P82980 135 aa16.92■□□□□ 0.3
HDAC6-218ENST00000470942 BFSP1Q12934 665 aa16.92■□□□□ 0.3
HDAC6-218ENST00000470942 GPR17Q13304 367 aa16.92■□□□□ 0.3
HDAC6-218ENST00000470942 TDGQ13569 410 aa16.92■□□□□ 0.3
HDAC6-218ENST00000470942 ELMOD1Q8N336 334 aa16.92■□□□□ 0.3
HDAC6-218ENST00000470942 KIAA0895Q8NCT3 520 aa16.92■□□□□ 0.3
HDAC6-218ENST00000470942 ITFG1Q8TB96 612 aa16.92■□□□□ 0.3
HDAC6-218ENST00000470942 RSAD2Q8WXG1 361 aa16.92■□□□□ 0.3
HDAC6-218ENST00000470942 BORCS6Q96GS4 357 aa16.92■□□□□ 0.3
HDAC6-218ENST00000470942 MFSD14AQ96MC6 490 aa16.92■□□□□ 0.3
HDAC6-218ENST00000470942 TMEM209Q96SK2 561 aa16.92■□□□□ 0.3
HDAC6-218ENST00000470942 CORO1BQ9BR76 489 aa16.92■□□□□ 0.3
HDAC6-218ENST00000470942 MRPS23Q9Y3D9 190 aaKnown RBP16.92■□□□□ 0.3
HDAC6-218ENST00000470942 HCN4Q9Y3Q4 1203 aa16.92■□□□□ 0.3
HDAC6-218ENST00000470942 ZFP37Q9Y6Q3 630 aaPredicted RBP16.92■□□□□ 0.3
HDAC6-218ENST00000470942 EXOC3O60645 756 aa16.91■□□□□ 0.3
HDAC6-218ENST00000470942 RHOP08100 348 aa16.91■□□□□ 0.3
HDAC6-218ENST00000470942 DLATP10515 647 aaKnown RBP16.91■□□□□ 0.3
HDAC6-218ENST00000470942 TNNI1P19237 187 aa16.91■□□□□ 0.3
HDAC6-218ENST00000470942 TWF1Q12792 350 aa16.91■□□□□ 0.3
HDAC6-218ENST00000470942 DUOXA2Q1HG44 320 aa16.91■□□□□ 0.3
HDAC6-218ENST00000470942 WSCD1Q658N2 575 aa16.91■□□□□ 0.3
HDAC6-218ENST00000470942 LRRC52Q8N7C0 313 aa16.91■□□□□ 0.3
HDAC6-218ENST00000470942 ST13P5Q8NFI4 369 aaPredicted RBP16.91■□□□□ 0.3
HDAC6-218ENST00000470942 OR5B17Q8NGF7 314 aa16.91■□□□□ 0.3
HDAC6-218ENST00000470942 GOLGA5Q8TBA6 731 aa16.91■□□□□ 0.3
HDAC6-218ENST00000470942 CCDC127Q96BQ5 260 aa16.91■□□□□ 0.3
HDAC6-218ENST00000470942 CCDC34Q96HJ3 373 aa16.91■□□□□ 0.3
HDAC6-218ENST00000470942 ZNF512Q96ME7 567 aaPredicted RBP16.91■□□□□ 0.3
HDAC6-218ENST00000470942 FNBP1Q96RU3 617 aa16.91■□□□□ 0.3
HDAC6-218ENST00000470942 CDH7Q9ULB5 785 aa16.91■□□□□ 0.3
HDAC6-218ENST00000470942 HUS1O60921 280 aa16.9■□□□□ 0.3
HDAC6-218ENST00000470942 CYP24A1Q07973 514 aa16.9■□□□□ 0.3
HDAC6-218ENST00000470942 DPYDQ12882 1025 aa16.9■□□□□ 0.3
HDAC6-218ENST00000470942 DUSP4Q13115 394 aa16.9■□□□□ 0.3
HDAC6-218ENST00000470942 SLC39A12Q504Y0 691 aa16.9■□□□□ 0.3
HDAC6-218ENST00000470942 SCARA3Q6AZY7 606 aa16.9■□□□□ 0.3
HDAC6-218ENST00000470942 IQCEQ6IPM2 695 aa16.9■□□□□ 0.3
HDAC6-218ENST00000470942 BMP8AQ7Z5Y6 402 aa16.9■□□□□ 0.3
HDAC6-218ENST00000470942 WDR49Q8IV35 697 aa16.9■□□□□ 0.3
HDAC6-218ENST00000470942 C12orf56Q8IXR9 622 aa16.9■□□□□ 0.3
HDAC6-218ENST00000470942 ATAD1Q8NBU5 361 aa16.9■□□□□ 0.3
HDAC6-218ENST00000470942 OR10T2Q8NGX3 314 aa16.9■□□□□ 0.3
HDAC6-218ENST00000470942 ING5Q8WYH8 240 aa16.9■□□□□ 0.3
HDAC6-218ENST00000470942 FGF13Q92913 245 aa16.9■□□□□ 0.3
HDAC6-218ENST00000470942 NXPE3Q969Y0 559 aa16.9■□□□□ 0.3
HDAC6-218ENST00000470942 ASIC4Q96FT7 647 aa16.9■□□□□ 0.3
HDAC6-218ENST00000470942 SIX4Q9UIU6 781 aa16.9■□□□□ 0.3
HDAC6-218ENST00000470942 SLC27A5Q9Y2P5 690 aa16.9■□□□□ 0.3
HDAC6-218ENST00000470942 YIPF1Q9Y548 306 aa16.9■□□□□ 0.3
HDAC6-218ENST00000470942 SNX9Q9Y5X1 595 aa16.9■□□□□ 0.3
HDAC6-218ENST00000470942 PTPRJQ12913 1337 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms