RNA–Protein interactions for RNA: ENST00000470600.1

TGFBR3-206, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 2

Gene TGFBR3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-206ENST00000470600 LRRTM3Q86VH5 581 aa9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 PDCL2Q8N4E4 241 aa9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 TTC9BQ8N6N2 239 aa9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 CCDC47Q96A33 483 aaKnown RBP9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 ZNF707Q96C28 371 aaPredicted RBP9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 PABPC5Q96DU9 382 aaKnown RBP9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 FAM212AQ96EL1 285 aa9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 CCDC34Q96HJ3 373 aa9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 FAM193BQ96PV7 902 aaPredicted RBP9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 TWNKQ96RR1 684 aa9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 TTPALQ9BTX7 342 aa9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 SRRTQ9BXP5 876 aaKnown RBP9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 DNAJC25Q9H1X3 360 aa9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 SMYD3Q9H7B4 428 aa9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 TMEM8AQ9HCN3 771 aa9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 SIX2Q9NPC8 291 aa9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 NGRNQ9NPE2 291 aaKnown RBP9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 HMGXB4Q9UGU5 601 aa9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 FBXL5Q9UKA1 691 aa9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 FBXW11Q9UKB1 542 aa9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 TIMM13Q9Y5L4 95 aaPredicted RBP9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 ZNF638Q14966 1978 aaKnown RBP9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 COL4A3Q01955 1670 aa9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 KPNA7A9QM74 516 aa9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 GOLGA6L22H0YM25 854 aa9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 CETN3O15182 167 aa9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 CSPG5O95196 566 aa9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 SEC24AO95486 1093 aa9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 CXCL14O95715 111 aa9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 C1RP00736 705 aa9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 ACO1P21399 889 aaKnown RBP9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 GTF2H1P32780 548 aa9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 NRIP1P48552 1158 aa9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 TAF6P49848 677 aa9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 ROR1Q01973 937 aa9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 APBA1Q02410 837 aa9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 INCA1Q0VD86 236 aa9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 NCOA4Q13772 614 aa9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 RAB33AQ14088 237 aa9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 SURF1Q15526 300 aa9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 PSMD5Q16401 504 aa9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 SPOUT1Q5T280 376 aaKnown RBP9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 PDE12Q6L8Q7 609 aaKnown RBP9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 CSGALNACT2Q8N6G5 542 aa9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 MAFAQ8NHW3 353 aaPredicted RBP9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 OLIG1Q8TAK6 271 aa9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 RIN2Q8WYP3 895 aaPredicted RBP9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 SUSD6Q92537 303 aa9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 CNOT6LQ96LI5 555 aaKnown RBP9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 GAS2L1Q99501 681 aaPredicted RBP9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 ARID3AQ99856 593 aa9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 LPIN3Q9BQK8 851 aa9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 BPIFA3Q9BQP9 254 aa9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 MRPL45Q9BRJ2 306 aaKnown RBP9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 PI4K2AQ9BTU6 479 aa9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 THAP9Q9H5L6 903 aa9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 BARX2Q9UMQ3 279 aaPredicted RBP9.32□□□□□ -0.92
TGFBR3-206ENST00000470600 NCOR1O75376 2440 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 BICDL2A1A5D9 508 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 SYCE3A1L190 88 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 GRXCR2A6NFK2 248 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 TGM5O43548 720 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 XPOTO43592 962 aaKnown RBP9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 TACC1O75410 805 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 TADA2AO75478 443 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 OR4Q2P0C623 313 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 TMEM191BP0C7N4 346 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 WARSP23381 471 aaKnown RBP9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 LMO2P25791 158 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 RPL13P26373 211 aaKnown RBP9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 FMO5P49326 533 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 CACNA2D1P54289 1103 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 RBP5P82980 135 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 KCNMA1Q12791 1236 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 ELAVL2Q12926 359 aaKnown RBP9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 STX1AQ16623 288 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 ANO6Q4KMQ2 910 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 FAM171BQ6P995 826 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 PAQR9Q6ZVX9 377 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 TMC7Q7Z402 723 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 TOP6BLQ8N6T0 577 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 SMRP1Q8NCR6 262 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 KAT5Q92993 513 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 TATDN2Q93075 761 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 HPDLQ96IR7 371 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 ANKRD36BP1Q96IX9 119 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 KREMEN1Q96MU8 473 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 ZSWIM1Q9BR11 485 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 LRRC3Q9BY71 257 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 RHOBTB2Q9BYZ6 727 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 GPR88Q9GZN0 384 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 ZCWPW1Q9H0M4 648 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 DPEP3Q9H4B8 488 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 UBE2ZQ9H832 354 aaPredicted RBP9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 CRTAC1Q9NQ79 661 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 NFE2L3Q9Y4A8 694 aa9.31□□□□□ -0.92
TGFBR3-206ENST00000470600 MTMR11A4FU01 709 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms