RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 AFF1P51825 1210 aaKnown RBP16.17■□□□□ 0.18
COL4A5-203ENST00000470339 VAV2P52735 878 aa16.17■□□□□ 0.18
COL4A5-203ENST00000470339 LILRA4P59901 499 aa16.17■□□□□ 0.18
COL4A5-203ENST00000470339 GFPT1Q06210 699 aaPredicted RBP16.17■□□□□ 0.18
COL4A5-203ENST00000470339 TUSC3Q13454 348 aa16.17■□□□□ 0.18
COL4A5-203ENST00000470339 IKBKEQ14164 716 aa16.17■□□□□ 0.18
COL4A5-203ENST00000470339 NOMO2Q5JPE7 1267 aa16.17■□□□□ 0.18
COL4A5-203ENST00000470339 ALKBH5Q6P6C2 394 aaKnown RBP16.17■□□□□ 0.18
COL4A5-203ENST00000470339 NOP9Q86U38 636 aaKnown RBP16.17■□□□□ 0.18
COL4A5-203ENST00000470339 CRIPAKQ8N1N5 446 aa16.17■□□□□ 0.18
COL4A5-203ENST00000470339 C17orf53Q8N3J3 647 aaPredicted RBP16.17■□□□□ 0.18
COL4A5-203ENST00000470339 OLIG1Q8TAK6 271 aa16.17■□□□□ 0.18
COL4A5-203ENST00000470339 DDX1Q92499 740 aaKnown RBP16.17■□□□□ 0.18
COL4A5-203ENST00000470339 INTUQ9ULD6 942 aa16.17■□□□□ 0.18
COL4A5-203ENST00000470339 KIAA1257Q9ULG3 409 aa16.17■□□□□ 0.18
COL4A5-203ENST00000470339 BARX2Q9UMQ3 279 aaPredicted RBP16.17■□□□□ 0.18
COL4A5-203ENST00000470339 FNDC1Q4ZHG4 1894 aaPredicted RBP16.16■□□□□ 0.18
COL4A5-203ENST00000470339 ALPK3Q96L96 1907 aa16.16■□□□□ 0.18
COL4A5-203ENST00000470339 KIF2AO00139 706 aaPredicted RBP16.16■□□□□ 0.18
COL4A5-203ENST00000470339 PPEF2O14830 753 aa16.16■□□□□ 0.18
COL4A5-203ENST00000470339 PJA2O43164 708 aa16.16■□□□□ 0.18
COL4A5-203ENST00000470339 EFCAB14O75071 495 aa16.16■□□□□ 0.18
COL4A5-203ENST00000470339 CILPO75339 1184 aa16.16■□□□□ 0.18
COL4A5-203ENST00000470339 TACC1O75410 805 aa16.16■□□□□ 0.18
COL4A5-203ENST00000470339 RAG1P15918 1043 aa16.16■□□□□ 0.18
COL4A5-203ENST00000470339 CHRNB2P17787 502 aa16.16■□□□□ 0.18
COL4A5-203ENST00000470339 CYP27A1Q02318 531 aa16.16■□□□□ 0.18
COL4A5-203ENST00000470339 UPP1Q16831 310 aa16.16■□□□□ 0.18
COL4A5-203ENST00000470339 CLLU1OSQ5K130 101 aa16.16■□□□□ 0.18
COL4A5-203ENST00000470339 MFSD5Q6N075 450 aa16.16■□□□□ 0.18
COL4A5-203ENST00000470339 TRIM72Q6ZMU5 477 aa16.16■□□□□ 0.18
COL4A5-203ENST00000470339 KIAA1328Q86T90 577 aa16.16■□□□□ 0.18
COL4A5-203ENST00000470339 UNC93AQ86WB7 457 aa16.16■□□□□ 0.18
COL4A5-203ENST00000470339 NPAS4Q8IUM7 802 aa16.16■□□□□ 0.18
COL4A5-203ENST00000470339 GPIHBP1Q8IV16 184 aa16.16■□□□□ 0.18
COL4A5-203ENST00000470339 RPUSD2Q8IZ73 545 aaKnown RBP16.16■□□□□ 0.18
COL4A5-203ENST00000470339 TMEM130Q8N3G9 435 aa16.16■□□□□ 0.18
COL4A5-203ENST00000470339 TMEM199Q8N511 208 aa16.16■□□□□ 0.18
COL4A5-203ENST00000470339 MMS19Q96T76 1030 aa16.16■□□□□ 0.18
COL4A5-203ENST00000470339 TSGA10Q9BZW7 698 aa16.16■□□□□ 0.18
COL4A5-203ENST00000470339 DNAI2Q9GZS0 605 aa16.16■□□□□ 0.18
COL4A5-203ENST00000470339 SDCBP2Q9H190 292 aa16.16■□□□□ 0.18
COL4A5-203ENST00000470339 SMYD3Q9H7B4 428 aa16.16■□□□□ 0.18
COL4A5-203ENST00000470339 RNF19AQ9NV58 838 aa16.16■□□□□ 0.18
COL4A5-203ENST00000470339 LRFN2Q9ULH4 789 aa16.16■□□□□ 0.18
COL4A5-203ENST00000470339 SNX9Q9Y5X1 595 aa16.16■□□□□ 0.18
COL4A5-203ENST00000470339 ABHD14A-ACY1A0A1B0GW23 586 aa16.15■□□□□ 0.18
COL4A5-203ENST00000470339 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.15■□□□□ 0.18
COL4A5-203ENST00000470339 TRIM43BA6NCK2 446 aa16.15■□□□□ 0.18
COL4A5-203ENST00000470339 PODXLO00592 558 aa16.15■□□□□ 0.18
COL4A5-203ENST00000470339 KRT86O43790 486 aa16.15■□□□□ 0.18
COL4A5-203ENST00000470339 POMCP01189 267 aa16.15■□□□□ 0.18
COL4A5-203ENST00000470339 CD58P19256 250 aa16.15■□□□□ 0.18
COL4A5-203ENST00000470339 GNA15P30679 374 aa16.15■□□□□ 0.18
COL4A5-203ENST00000470339 CDH8P55286 799 aa16.15■□□□□ 0.18
COL4A5-203ENST00000470339 DSC1Q08554 894 aa16.15■□□□□ 0.18
COL4A5-203ENST00000470339 KIF5AQ12840 1032 aa16.15■□□□□ 0.18
COL4A5-203ENST00000470339 TCTN1Q2MV58 587 aa16.15■□□□□ 0.18
COL4A5-203ENST00000470339 CCDC122Q5T0U0 273 aa16.15■□□□□ 0.18
COL4A5-203ENST00000470339 PPP1R2P3Q6NXS1 205 aa16.15■□□□□ 0.18
COL4A5-203ENST00000470339 SCARA5Q6ZMJ2 495 aa16.15■□□□□ 0.18
COL4A5-203ENST00000470339 NYAP1Q6ZVC0 841 aa16.15■□□□□ 0.18
COL4A5-203ENST00000470339 DEFB128Q7Z7B8 93 aa16.15■□□□□ 0.18
COL4A5-203ENST00000470339 GLYCTKQ8IVS8 523 aa16.15■□□□□ 0.18
COL4A5-203ENST00000470339 TOP6BLQ8N6T0 577 aa16.15■□□□□ 0.18
COL4A5-203ENST00000470339 LNX1Q8TBB1 728 aaPredicted RBP16.15■□□□□ 0.18
COL4A5-203ENST00000470339 SLC20A1Q8WUM9 679 aa16.15■□□□□ 0.18
COL4A5-203ENST00000470339 TRIM43Q96BQ3 446 aaPredicted RBP16.15■□□□□ 0.18
COL4A5-203ENST00000470339 VWCEQ96DN2 955 aa16.15■□□□□ 0.18
COL4A5-203ENST00000470339 GOLGA2P5Q9HBQ8 144 aa16.15■□□□□ 0.18
COL4A5-203ENST00000470339 SPTLC1O15269 473 aa16.14■□□□□ 0.17
COL4A5-203ENST00000470339 HUS1O60921 280 aa16.14■□□□□ 0.17
COL4A5-203ENST00000470339 AARSP49588 968 aaKnown RBP eCLIP16.14■□□□□ 0.17
COL4A5-203ENST00000470339 CLCNKBP51801 687 aa16.14■□□□□ 0.17
COL4A5-203ENST00000470339 RAD23BP54727 409 aa16.14■□□□□ 0.17
COL4A5-203ENST00000470339 FMO1Q01740 532 aa16.14■□□□□ 0.17
COL4A5-203ENST00000470339 PTPN14Q15678 1187 aa16.14■□□□□ 0.17
COL4A5-203ENST00000470339 SOWAHAQ2M3V2 549 aa16.14■□□□□ 0.17
COL4A5-203ENST00000470339 ARHGAP29Q52LW3 1261 aa16.14■□□□□ 0.17
COL4A5-203ENST00000470339 DCLRE1AQ6PJP8 1040 aa16.14■□□□□ 0.17
COL4A5-203ENST00000470339 ABI1Q8IZP0 508 aa16.14■□□□□ 0.17
COL4A5-203ENST00000470339 APPL2Q8NEU8 664 aa16.14■□□□□ 0.17
COL4A5-203ENST00000470339 SPATA18Q8TC71 538 aa16.14■□□□□ 0.17
COL4A5-203ENST00000470339 WHAMMQ8TF30 809 aa16.14■□□□□ 0.17
COL4A5-203ENST00000470339 ZNF606Q8WXB4 792 aa16.14■□□□□ 0.17
COL4A5-203ENST00000470339 TMEM176AQ96HP8 235 aa16.14■□□□□ 0.17
COL4A5-203ENST00000470339 ISCUQ9H1K1 167 aa16.14■□□□□ 0.17
COL4A5-203ENST00000470339 INPP5FQ9Y2H2 1132 aa16.14■□□□□ 0.17
COL4A5-203ENST00000470339 ARHGEF37A1IGU5 675 aa16.13■□□□□ 0.17
COL4A5-203ENST00000470339 BTNL10A8MVZ5 291 aa16.13■□□□□ 0.17
COL4A5-203ENST00000470339 MED7O43513 233 aa16.13■□□□□ 0.17
COL4A5-203ENST00000470339 RTN2O75298 545 aa16.13■□□□□ 0.17
COL4A5-203ENST00000470339 MMEP08473 750 aa16.13■□□□□ 0.17
COL4A5-203ENST00000470339 H2AFZP0C0S5 128 aa16.13■□□□□ 0.17
COL4A5-203ENST00000470339 FGFR1P11362 822 aa16.13■□□□□ 0.17
COL4A5-203ENST00000470339 ARHGAP25P42331 645 aa16.13■□□□□ 0.17
COL4A5-203ENST00000470339 RAP1GAPP47736 663 aa16.13■□□□□ 0.17
COL4A5-203ENST00000470339 H2AFVQ71UI9 128 aa16.13■□□□□ 0.17
COL4A5-203ENST00000470339 TMEM86AQ8N2M4 240 aa16.13■□□□□ 0.17
COL4A5-203ENST00000470339 SLC4A11Q8NBS3 891 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms