RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 IRF7Q92985 503 aa18.96■□□□□ 0.63
COL7A1-208ENST00000470076 SENP8Q96LD8 212 aa18.96■□□□□ 0.63
COL7A1-208ENST00000470076 PGLYRP2Q96PD5 576 aa18.96■□□□□ 0.63
COL7A1-208ENST00000470076 TRPV4Q9HBA0 871 aa18.96■□□□□ 0.63
COL7A1-208ENST00000470076 TRPV5Q9NQA5 729 aa18.96■□□□□ 0.63
COL7A1-208ENST00000470076 STK17AQ9UEE5 414 aa18.96■□□□□ 0.63
COL7A1-208ENST00000470076 CCDC39Q9UFE4 941 aa18.96■□□□□ 0.63
COL7A1-208ENST00000470076 ANKRD63C9JTQ0 380 aa18.95■□□□□ 0.62
COL7A1-208ENST00000470076 PIRO00625 290 aa18.95■□□□□ 0.62
COL7A1-208ENST00000470076 MAN2B1O00754 1011 aa18.95■□□□□ 0.62
COL7A1-208ENST00000470076 NRG2O14511 850 aaPredicted RBP18.95■□□□□ 0.62
COL7A1-208ENST00000470076 NFICP08651 508 aa18.95■□□□□ 0.62
COL7A1-208ENST00000470076 ALDH1A3P47895 512 aa18.95■□□□□ 0.62
COL7A1-208ENST00000470076 ACOT2P49753 483 aa18.95■□□□□ 0.62
COL7A1-208ENST00000470076 POU5F1Q01860 360 aaKnown RBP18.95■□□□□ 0.62
COL7A1-208ENST00000470076 ZC2HC1CQ53FD0 456 aaPredicted RBP18.95■□□□□ 0.62
COL7A1-208ENST00000470076 ADALQ6DHV7 355 aa18.95■□□□□ 0.62
COL7A1-208ENST00000470076 CENPPQ6IPU0 288 aa18.95■□□□□ 0.62
COL7A1-208ENST00000470076 ARMCX5Q6P1M9 558 aa18.95■□□□□ 0.62
COL7A1-208ENST00000470076 ZSCAN18Q8TBC5 510 aaPredicted RBP18.95■□□□□ 0.62
COL7A1-208ENST00000470076 E2F7Q96AV8 911 aa18.95■□□□□ 0.62
COL7A1-208ENST00000470076 HVCN1Q96D96 273 aa18.95■□□□□ 0.62
COL7A1-208ENST00000470076 EPSTI1Q96J88 318 aa18.95■□□□□ 0.62
COL7A1-208ENST00000470076 ZSWIM3Q96MP5 696 aa18.95■□□□□ 0.62
COL7A1-208ENST00000470076 HSFX1Q9UBD0 423 aa18.95■□□□□ 0.62
COL7A1-208ENST00000470076 AGO2Q9UKV8 859 aaKnown RBP18.95■□□□□ 0.62
COL7A1-208ENST00000470076 C2CD2Q9Y426 696 aa18.95■□□□□ 0.62
COL7A1-208ENST00000470076 ASB3Q9Y575 518 aa18.95■□□□□ 0.62
COL7A1-208ENST00000470076 STYXL1Q9Y6J8 313 aa18.95■□□□□ 0.62
COL7A1-208ENST00000470076 SCN1AP35498 2009 aa18.95■□□□□ 0.62
COL7A1-208ENST00000470076 ANO9A1A5B4 782 aa18.94■□□□□ 0.62
COL7A1-208ENST00000470076 MTMR11A4FU01 709 aa18.94■□□□□ 0.62
COL7A1-208ENST00000470076 CYP11A1P05108 521 aa18.94■□□□□ 0.62
COL7A1-208ENST00000470076 GJA1P17302 382 aa18.94■□□□□ 0.62
COL7A1-208ENST00000470076 FOXK2Q01167 660 aa18.94■□□□□ 0.62
COL7A1-208ENST00000470076 PTPAQ15257 358 aa18.94■□□□□ 0.62
COL7A1-208ENST00000470076 TEAD2Q15562 447 aa18.94■□□□□ 0.62
COL7A1-208ENST00000470076 VITQ6UXI7 678 aa18.94■□□□□ 0.62
COL7A1-208ENST00000470076 USP49Q70CQ1 688 aa18.94■□□□□ 0.62
COL7A1-208ENST00000470076 ZNF720Q7Z2F6 126 aa18.94■□□□□ 0.62
COL7A1-208ENST00000470076 SHKBP1Q8TBC3 707 aa18.94■□□□□ 0.62
COL7A1-208ENST00000470076 LRRC3Q9BY71 257 aa18.94■□□□□ 0.62
COL7A1-208ENST00000470076 DNAJC25Q9H1X3 360 aa18.94■□□□□ 0.62
COL7A1-208ENST00000470076 CRISPLD1Q9H336 500 aa18.94■□□□□ 0.62
COL7A1-208ENST00000470076 SLITRK6Q9H5Y7 841 aa18.94■□□□□ 0.62
COL7A1-208ENST00000470076 ZNF334Q9HCZ1 680 aaPredicted RBP18.94■□□□□ 0.62
COL7A1-208ENST00000470076 SEL1LQ9UBV2 794 aa18.94■□□□□ 0.62
COL7A1-208ENST00000470076 DSEQ9UL01 958 aa18.94■□□□□ 0.62
COL7A1-208ENST00000470076 SRPRBQ9Y5M8 271 aaKnown RBP18.94■□□□□ 0.62
COL7A1-208ENST00000470076 CLIC4Q9Y696 253 aa18.94■□□□□ 0.62
COL7A1-208ENST00000470076 TSC2P49815 1807 aa18.94■□□□□ 0.62
COL7A1-208ENST00000470076 DMXL1Q9Y485 3027 aa18.94■□□□□ 0.62
COL7A1-208ENST00000470076 SHISA7A6NL88 538 aa18.93■□□□□ 0.62
COL7A1-208ENST00000470076 SPTLC1O15269 473 aa18.93■□□□□ 0.62
COL7A1-208ENST00000470076 KINO60870 393 aaKnown RBP18.93■□□□□ 0.62
COL7A1-208ENST00000470076 GDI1P31150 447 aa18.93■□□□□ 0.62
COL7A1-208ENST00000470076 TXLNAP40222 546 aa18.93■□□□□ 0.62
COL7A1-208ENST00000470076 VIPR2P41587 438 aa18.93■□□□□ 0.62
COL7A1-208ENST00000470076 POSTNQ15063 836 aa18.93■□□□□ 0.62
COL7A1-208ENST00000470076 DYMQ7RTS9 669 aa18.93■□□□□ 0.62
COL7A1-208ENST00000470076 SFR1Q86XK3 245 aa18.93■□□□□ 0.62
COL7A1-208ENST00000470076 TMC8Q8IU68 726 aa18.93■□□□□ 0.62
COL7A1-208ENST00000470076 MFSD6LQ8IWD5 586 aa18.93■□□□□ 0.62
COL7A1-208ENST00000470076 ATAD1Q8NBU5 361 aa18.93■□□□□ 0.62
COL7A1-208ENST00000470076 FBXO2Q9UK22 296 aaPredicted RBP18.93■□□□□ 0.62
COL7A1-208ENST00000470076 SLC27A5Q9Y2P5 690 aa18.93■□□□□ 0.62
COL7A1-208ENST00000470076 TICRRQ7Z2Z1 1910 aa18.93■□□□□ 0.62
COL7A1-208ENST00000470076 COL4A2P08572 1712 aa18.93■□□□□ 0.62
COL7A1-208ENST00000470076 DCHS1Q96JQ0 3298 aa18.92■□□□□ 0.62
COL7A1-208ENST00000470076 TCHHQ07283 1943 aa18.92■□□□□ 0.62
COL7A1-208ENST00000470076 A0A1W2PRU2 124 aa18.92■□□□□ 0.62
COL7A1-208ENST00000470076 TISP43B9A030 160 aa18.92■□□□□ 0.62
COL7A1-208ENST00000470076 ZNF263O14978 683 aa18.92■□□□□ 0.62
COL7A1-208ENST00000470076 FGF19O95750 216 aa18.92■□□□□ 0.62
COL7A1-208ENST00000470076 CSTF1Q05048 431 aaKnown RBP18.92■□□□□ 0.62
COL7A1-208ENST00000470076 FZD5Q13467 585 aa18.92■□□□□ 0.62
COL7A1-208ENST00000470076 RRAGBQ5VZM2 374 aa18.92■□□□□ 0.62
COL7A1-208ENST00000470076 ITIH5Q86UX2 942 aa18.92■□□□□ 0.62
COL7A1-208ENST00000470076 RUBCNQ92622 972 aa18.92■□□□□ 0.62
COL7A1-208ENST00000470076 PSMG2Q969U7 264 aa18.92■□□□□ 0.62
COL7A1-208ENST00000470076 DPP3Q9NY33 737 aa18.92■□□□□ 0.62
COL7A1-208ENST00000470076 PCDHGA2Q9Y5H1 932 aa18.92■□□□□ 0.62
COL7A1-208ENST00000470076 GPR179Q6PRD1 2367 aa18.91■□□□□ 0.62
COL7A1-208ENST00000470076 HEPACAM2A8MVW5 462 aa18.91■□□□□ 0.62
COL7A1-208ENST00000470076 PPP1R37O75864 691 aa18.91■□□□□ 0.62
COL7A1-208ENST00000470076 GAP43P17677 238 aa18.91■□□□□ 0.62
COL7A1-208ENST00000470076 ID4P47928 161 aa18.91■□□□□ 0.62
COL7A1-208ENST00000470076 TUFMP49411 452 aaKnown RBP18.91■□□□□ 0.62
COL7A1-208ENST00000470076 TAF6P49848 677 aa18.91■□□□□ 0.62
COL7A1-208ENST00000470076 SV2BQ7L1I2 683 aa18.91■□□□□ 0.62
COL7A1-208ENST00000470076 DNAJB7Q7Z6W7 309 aaPredicted RBP18.91■□□□□ 0.62
COL7A1-208ENST00000470076 METTL23Q86XA0 190 aa18.91■□□□□ 0.62
COL7A1-208ENST00000470076 NT5DC4Q86YG4 428 aa18.91■□□□□ 0.62
COL7A1-208ENST00000470076 ZNF687Q8N1G0 1237 aa18.91■□□□□ 0.62
COL7A1-208ENST00000470076 OR10T2Q8NGX3 314 aa18.91■□□□□ 0.62
COL7A1-208ENST00000470076 POMGNT1Q8WZA1 660 aa18.91■□□□□ 0.62
COL7A1-208ENST00000470076 TMEM209Q96SK2 561 aa18.91■□□□□ 0.62
COL7A1-208ENST00000470076 STRA6Q9BX79 667 aa18.91■□□□□ 0.62
COL7A1-208ENST00000470076 MRPL44Q9H9J2 332 aaKnown RBP18.91■□□□□ 0.62
COL7A1-208ENST00000470076 EXOC7Q9UPT5 735 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms