RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 SPRED3Q2MJR0 410 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.15□□□□□ -1.59
SF3B1-207ENST00000468925 VWA3BQ502W6 1294 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 BOLA3Q53S33 107 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 COBLL1Q53SF7 1204 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 SGO2Q562F6 1265 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 TNFAIP8L3Q5GJ75 292 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 BEND3Q5T5X7 828 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 MEI1Q5TIA1 1274 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 KIAA1841Q6NSI8 718 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 C1orf228Q6PIY5 440 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 DHRS4L2Q6PKH6 230 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 Q6ZNX1 250 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 TRMT10CQ7L0Y3 403 aaKnown RBP5.15□□□□□ -1.59
SF3B1-207ENST00000468925 DAAM2Q86T65 1068 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 PATL1Q86TB9 770 aaKnown RBP5.15□□□□□ -1.59
SF3B1-207ENST00000468925 ZC3H18Q86VM9 953 aaKnown RBP5.15□□□□□ -1.59
SF3B1-207ENST00000468925 NOSTRINQ8IVI9 506 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 SLC15A3Q8IY34 581 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 SPICE1Q8N0Z3 855 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 TERB1Q8NA31 727 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 MINDY2Q8NBR6 621 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 NCOA7Q8NI08 942 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 ZNF507Q8TCN5 953 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 SCFD2Q8WU76 684 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.15□□□□□ -1.59
SF3B1-207ENST00000468925 CKAP2Q8WWK9 683 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 KCNN1Q92952 543 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 ANKRD36BP1Q96IX9 119 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 COG3Q96JB2 828 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 COX4I2Q96KJ9 171 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 FAM227BQ96M60 508 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 MAGEB18Q96M61 343 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 BTBD9Q96Q07 612 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 CITED4Q96RK1 184 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 SRPK1Q96SB4 655 aaKnown RBP5.15□□□□□ -1.59
SF3B1-207ENST00000468925 FMO2Q99518 471 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 CHP1Q99653 195 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 OLFM1Q99784 485 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 ALG1Q9BT22 464 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 DDX23Q9BUQ8 820 aaKnown RBP5.15□□□□□ -1.59
SF3B1-207ENST00000468925 TLR10Q9BXR5 811 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 IMPG2Q9BZV3 1241 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 DRC3Q9H069 523 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 ZMYND12Q9H0C1 365 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 RNF208Q9H0X6 261 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 CUEDC2Q9H467 287 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 RETREG1Q9H6L5 497 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 C12orf49Q9H741 205 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 C10orf88Q9H8K7 445 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 CLK4Q9HAZ1 481 aaKnown RBP5.15□□□□□ -1.59
SF3B1-207ENST00000468925 PIDD1Q9HB75 910 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 RHBDL2Q9NX52 303 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 EURLQ9NYK6 297 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 NKIRAS1Q9NYS0 192 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 SENP1Q9P0U3 644 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 UVRAGQ9P2Y5 699 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 SOX13Q9UN79 622 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 AGAP1Q9UPQ3 857 aa5.15□□□□□ -1.59
SF3B1-207ENST00000468925 A0A087WWV3 80 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 A0A0D9SFI3 127 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 A0A1B0GVG6 124 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 PVALEFA0A1B0GWK0 134 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 MACROD2A1Z1Q3 448 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 CENPBD1B2RD01 187 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 H3BNX3 289 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 ZNF701M0R085 212 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-207ENST00000468925 SOX1O00570 391 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-207ENST00000468925 ZNF185O15231 689 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 RNMTO43148 476 aaKnown RBP5.14□□□□□ -1.59
SF3B1-207ENST00000468925 HNRNPRO43390 633 aaKnown RBP5.14□□□□□ -1.59
SF3B1-207ENST00000468925 PEX1O43933 1283 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 RANBP6O60518 1105 aaKnown RBP5.14□□□□□ -1.59
SF3B1-207ENST00000468925 MAGEC1O60732 1142 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 TBCAO75347 108 aaKnown RBP5.14□□□□□ -1.59
SF3B1-207ENST00000468925 SUPT3HO75486 399 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 GGPS1O95749 300 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 KRT6AP02538 564 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 KRT6BP04259 564 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 HMOX1P09601 288 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 CYP2C9P11712 490 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 MARCKSP29966 332 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-207ENST00000468925 GNA15P30679 374 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 KRT2P35908 639 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 HALP42357 657 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 MATR3P43243 847 aaKnown RBP eCLIP5.14□□□□□ -1.59
SF3B1-207ENST00000468925 TRAPPC10P48553 1259 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 KRT6CP48668 564 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 HSPA13P48723 471 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 ARL4DP49703 201 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 GP2P55259 537 aaKnown RBP5.14□□□□□ -1.59
SF3B1-207ENST00000468925 CDR2Q01850 454 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 PTPN12Q05209 780 aaKnown RBP5.14□□□□□ -1.59
SF3B1-207ENST00000468925 C19orf57Q0VDD7 668 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 MED21Q13503 144 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 ITGA7Q13683 1181 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 IKBKEQ14164 716 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 TNIP1Q15025 636 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 RPS6KA1Q15418 735 aa5.14□□□□□ -1.59
SF3B1-207ENST00000468925 NAB2Q15742 525 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms