RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 ACOT2P49753 483 aa16.73■□□□□ 0.27
TSPAN4-211ENST00000468468 CYP4F22Q6NT55 531 aa16.73■□□□□ 0.27
TSPAN4-211ENST00000468468 TMEM270Q6UE05 265 aa16.73■□□□□ 0.27
TSPAN4-211ENST00000468468 VSIG10LQ86VR7 867 aa16.73■□□□□ 0.27
TSPAN4-211ENST00000468468 ABRAQ8N0Z2 381 aa16.73■□□□□ 0.27
TSPAN4-211ENST00000468468 KIAA1586Q9HCI6 787 aa16.73■□□□□ 0.27
TSPAN4-211ENST00000468468 TLR3O15455 904 aaKnown RBP16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 GJB6O95452 261 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 POTEJP0CG39 1038 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 NLRP11P59045 1033 aaKnown RBP16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 NOMO3P69849 1222 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 CLDN10P78369 228 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 P3H1Q32P28 736 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 GBP7Q8N8V2 638 aaPredicted RBP16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 CEP120Q8N960 986 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 EXD1Q8NHP7 514 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 MAGEB18Q96M61 343 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 RBM15Q96T37 977 aaKnown RBP eCLIP16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 ATP6V0A4Q9HBG4 840 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 ARHGAP28Q9P2N2 729 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 PARP14Q460N5 1801 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 DKC1O60832 514 aaKnown RBP eCLIP16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 VNN1O95497 513 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 PSAPP07602 524 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 KLRC2P26717 231 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 GNA15P30679 374 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 MAGEA4P43358 317 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 RTP1P59025 263 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 COPS2P61201 443 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 BNIP1Q12981 228 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 MKRN3Q13064 507 aaKnown RBP16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 RIPK1Q13546 671 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 CUL2Q13617 745 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 GPRASP2Q96D09 838 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 PLCD4Q9BRC7 762 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 CYP26B1Q9NR63 512 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 KLHL11Q9NVR0 708 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 PRKAG3Q9UGI9 489 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 COL11A1P12107 1806 aaPredicted RBP16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 PTPRJQ12913 1337 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 PEX10O60683 326 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 INHBEP58166 350 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 STRN3Q13033 797 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 TMED2Q15363 201 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 KAZNQ674X7 775 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 TRIM72Q6ZMU5 477 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 RELL1Q8IUW5 271 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 C12orf42Q96LP6 360 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 APOBEC3GQ9HC16 384 aaKnown RBP16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 AGO2Q9UKV8 859 aaKnown RBP16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 PNMA3Q9UL41 463 aa16.72■□□□□ 0.27
TSPAN4-211ENST00000468468 RLFQ13129 1914 aa16.71■□□□□ 0.27
TSPAN4-211ENST00000468468 RASA4BC9J798 803 aa16.71■□□□□ 0.27
TSPAN4-211ENST00000468468 PI4K2BG5E9Z4 385 aa16.71■□□□□ 0.27
TSPAN4-211ENST00000468468 IGF2BP3O00425 579 aaKnown RBP eCLIP16.71■□□□□ 0.27
TSPAN4-211ENST00000468468 RASA4O43374 803 aa16.71■□□□□ 0.27
TSPAN4-211ENST00000468468 PRKCEQ02156 737 aa16.71■□□□□ 0.27
TSPAN4-211ENST00000468468 ZNF268Q14587 947 aaPredicted RBP16.71■□□□□ 0.27
TSPAN4-211ENST00000468468 ATP13A4Q4VNC1 1196 aa16.71■□□□□ 0.27
TSPAN4-211ENST00000468468 ZFYVE27Q5T4F4 411 aa16.71■□□□□ 0.27
TSPAN4-211ENST00000468468 PLEKHA7Q6IQ23 1121 aa16.71■□□□□ 0.27
TSPAN4-211ENST00000468468 PPP1R21Q6ZMI0 780 aa16.71■□□□□ 0.27
TSPAN4-211ENST00000468468 FITM2Q8N6M3 262 aa16.71■□□□□ 0.27
TSPAN4-211ENST00000468468 SCINQ9Y6U3 715 aa16.71■□□□□ 0.27
TSPAN4-211ENST00000468468 H0YCG3 227 aa16.71■□□□□ 0.26
TSPAN4-211ENST00000468468 SKAP2O75563 359 aaPredicted RBP16.71■□□□□ 0.26
TSPAN4-211ENST00000468468 KRT10P13645 584 aa16.71■□□□□ 0.26
TSPAN4-211ENST00000468468 KCNA2P16389 499 aa16.71■□□□□ 0.26
TSPAN4-211ENST00000468468 CETN2P41208 172 aa16.71■□□□□ 0.26
TSPAN4-211ENST00000468468 NFX1Q12986 1120 aaKnown RBP16.71■□□□□ 0.26
TSPAN4-211ENST00000468468 MTERF2Q49AM1 385 aa16.71■□□□□ 0.26
TSPAN4-211ENST00000468468 TMEM63BQ5T3F8 832 aa16.71■□□□□ 0.26
TSPAN4-211ENST00000468468 CGB2Q6NT52 195 aa16.71■□□□□ 0.26
TSPAN4-211ENST00000468468 XRRA1Q6P2D8 792 aa16.71■□□□□ 0.26
TSPAN4-211ENST00000468468 CATSPERGQ6ZRH7 1159 aa16.71■□□□□ 0.26
TSPAN4-211ENST00000468468 PHF13Q86YI8 300 aaPredicted RBP16.71■□□□□ 0.26
TSPAN4-211ENST00000468468 CCDC60Q8IWA6 550 aaPredicted RBP16.71■□□□□ 0.26
TSPAN4-211ENST00000468468 GPC2Q8N158 579 aa16.71■□□□□ 0.26
TSPAN4-211ENST00000468468 ANKRD35Q8N283 1001 aa16.71■□□□□ 0.26
TSPAN4-211ENST00000468468 ZCCHC9Q8N567 271 aaKnown RBP16.71■□□□□ 0.26
TSPAN4-211ENST00000468468 KLHL29Q96CT2 875 aa16.71■□□□□ 0.26
TSPAN4-211ENST00000468468 VCPIP1Q96JH7 1222 aa16.71■□□□□ 0.26
TSPAN4-211ENST00000468468 RMDN2Q96LZ7 410 aa16.71■□□□□ 0.26
TSPAN4-211ENST00000468468 PAIP2Q9BPZ3 127 aaKnown RBP16.71■□□□□ 0.26
TSPAN4-211ENST00000468468 RXFP1Q9HBX9 757 aa16.71■□□□□ 0.26
TSPAN4-211ENST00000468468 SAYSD1Q9NPB0 183 aa16.71■□□□□ 0.26
TSPAN4-211ENST00000468468 ADAMTS5Q9UNA0 930 aa16.71■□□□□ 0.26
TSPAN4-211ENST00000468468 ACTL7BQ9Y614 415 aa16.71■□□□□ 0.26
TSPAN4-211ENST00000468468 C19orf81C9J6K1 198 aa16.7■□□□□ 0.26
TSPAN4-211ENST00000468468 HGSO14964 777 aaPredicted RBP16.7■□□□□ 0.26
TSPAN4-211ENST00000468468 ALDH5A1P51649 535 aaPredicted RBP16.7■□□□□ 0.26
TSPAN4-211ENST00000468468 RBBP8NLQ8NC74 664 aaPredicted RBP16.7■□□□□ 0.26
TSPAN4-211ENST00000468468 FEZF2Q8TBJ5 459 aa16.7■□□□□ 0.26
TSPAN4-211ENST00000468468 EURLQ9NYK6 297 aa16.7■□□□□ 0.26
TSPAN4-211ENST00000468468 KLHL14Q9P2G3 628 aa16.7■□□□□ 0.26
TSPAN4-211ENST00000468468 PHIPQ8WWQ0 1821 aa16.7■□□□□ 0.26
TSPAN4-211ENST00000468468 MAFGO15525 162 aa16.7■□□□□ 0.26
TSPAN4-211ENST00000468468 TAC1P20366 129 aa16.7■□□□□ 0.26
TSPAN4-211ENST00000468468 FOXN2P32314 431 aa16.7■□□□□ 0.26
TSPAN4-211ENST00000468468 IL9RQ01113 521 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms