RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 CXorf38Q8TB03 319 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 TSC1Q92574 1164 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 ARHGEF26Q96DR7 871 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 OSMRQ99650 979 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 ARID3AQ99856 593 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 TRAIPQ9BWF2 469 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 ANKZF1Q9H8Y5 726 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 OSGEPQ9NPF4 335 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 XPNPEP3Q9NQH7 507 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 SLC38A7Q9NVC3 462 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 SIX4Q9UIU6 781 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 TMEM59LQ9UK28 342 aa10.85□□□□□ -0.67
MSH5-213ENST00000468136 BARX2Q9UMQ3 279 aaPredicted RBP10.85□□□□□ -0.67
MSH5-213ENST00000468136 ZNF185O15231 689 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 NCK2O43639 380 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 SPOPO43791 374 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 CEP104O60308 925 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 CILPO75339 1184 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 SETSIPP0DME0 302 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 CTGFP29279 349 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 GBP1P32455 592 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 CTNNA1P35221 906 aaKnown RBP10.84□□□□□ -0.67
MSH5-213ENST00000468136 APLP1P51693 650 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 BEX3Q00994 111 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 PRKCZQ05513 592 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 CACNB2Q08289 660 aaPredicted RBP10.84□□□□□ -0.67
MSH5-213ENST00000468136 NAA30Q147X3 362 aaPredicted RBP10.84□□□□□ -0.67
MSH5-213ENST00000468136 CNGA2Q16280 664 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 MAP3K21Q5TCX8 1036 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 NAA35Q5VZE5 725 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 C8orf74Q6P047 294 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 RUFY4Q6ZNE9 571 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 DPH6Q7L8W6 267 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 SERINC5Q86VE9 423 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 IFT20Q8IY31 132 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 NOA1Q8NC60 698 aaKnown RBP10.84□□□□□ -0.67
MSH5-213ENST00000468136 ZBTB10Q96DT7 871 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 TMEM176AQ96HP8 235 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 ZNF668Q96K58 619 aaPredicted RBP10.84□□□□□ -0.67
MSH5-213ENST00000468136 NCAPGQ9BPX3 1015 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 ZSWIM1Q9BR11 485 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 UBN1Q9NPG3 1134 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 HOMER3Q9NSC5 361 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.84□□□□□ -0.67
MSH5-213ENST00000468136 SAGE1Q9NXZ1 904 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 IP6K2Q9UHH9 426 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 MTUS1Q9ULD2 1270 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 AGAP1Q9UPQ3 857 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 PIN4Q9Y237 131 aaKnown RBP10.84□□□□□ -0.67
MSH5-213ENST00000468136 PCDHA3Q9Y5H8 950 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 SCN10AQ9Y5Y9 1956 aa10.84□□□□□ -0.67
MSH5-213ENST00000468136 PDE2AO00408 941 aaPredicted RBP10.83□□□□□ -0.68
MSH5-213ENST00000468136 DDX3YO15523 660 aaKnown RBP10.83□□□□□ -0.68
MSH5-213ENST00000468136 PSTPIP1O43586 416 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 RPS6KA5O75582 802 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 PROSCO94903 275 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 ZRANB2O95218 330 aaKnown RBP eCLIP10.83□□□□□ -0.68
MSH5-213ENST00000468136 TBC1D8O95759 1140 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 WEE2P0C1S8 567 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 ZSCAN20P17040 1043 aaPredicted RBP10.83□□□□□ -0.68
MSH5-213ENST00000468136 RWDD2BP57060 319 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 RBM10P98175 930 aaKnown RBP10.83□□□□□ -0.68
MSH5-213ENST00000468136 PTK7Q13308 1070 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 ACAP1Q15027 740 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 NBPF20Q3BBV1 942 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 LRRC38Q5VT99 294 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 CC2D1AQ6P1N0 951 aaPredicted RBP10.83□□□□□ -0.68
MSH5-213ENST00000468136 HDXQ7Z353 690 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 ERICH1Q86X53 443 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 TMEM192Q8IY95 271 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 SLAIN1Q8ND83 568 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 FEZF2Q8TBJ5 459 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 SPATA18Q8TC71 538 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 FNIP1Q8TF40 1166 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 CD101Q93033 1021 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 CYFIP2Q96F07 1278 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 NT5C1AQ9BXI3 368 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 FAM129AQ9BZQ8 928 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 VIPAS39Q9H9C1 493 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.83□□□□□ -0.681e-6■■■■■ 33.7
MSH5-213ENST00000468136 GDAP2Q9NXN4 497 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 SNTG2Q9NY99 539 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 OGFRQ9NZT2 677 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 STIM2Q9P246 746 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 NXF1Q9UBU9 619 aaKnown RBP10.83□□□□□ -0.68
MSH5-213ENST00000468136 DDX20Q9UHI6 824 aaKnown RBP10.83□□□□□ -0.68
MSH5-213ENST00000468136 ANAPC7Q9UJX3 599 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 GABRQQ9UN88 632 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 COG5Q9UP83 839 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 GINS2Q9Y248 185 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 RALGAPA2Q2PPJ7 1873 aa10.83□□□□□ -0.68
MSH5-213ENST00000468136 ARHGEF37A1IGU5 675 aa10.82□□□□□ -0.68
MSH5-213ENST00000468136 KRIT1O00522 736 aa10.82□□□□□ -0.68
MSH5-213ENST00000468136 RECQL4O94761 1208 aa10.82□□□□□ -0.68
MSH5-213ENST00000468136 RHOXF2BP0C7M4 288 aa10.82□□□□□ -0.68
MSH5-213ENST00000468136 PRKAR2AP13861 404 aaKnown RBP10.82□□□□□ -0.68
MSH5-213ENST00000468136 DESP17661 470 aa10.82□□□□□ -0.68
MSH5-213ENST00000468136 COMTP21964 271 aa10.82□□□□□ -0.68
MSH5-213ENST00000468136 LRPAP1P30533 357 aa10.82□□□□□ -0.68
MSH5-213ENST00000468136 CXCR5P32302 372 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms