RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 C1QTNF8P60827 252 aa21.96■■□□□ 1.11
TMEM53-207ENST00000468117 LRRC52Q8N7C0 313 aa21.96■■□□□ 1.11
TMEM53-207ENST00000468117 TSPAN18Q96SJ8 248 aa21.96■■□□□ 1.11
TMEM53-207ENST00000468117 GAD1Q99259 594 aa21.96■■□□□ 1.11
TMEM53-207ENST00000468117 GOLPH3Q9H4A6 298 aa21.96■■□□□ 1.11
TMEM53-207ENST00000468117 CYP3A43Q9HB55 503 aa21.96■■□□□ 1.11
TMEM53-207ENST00000468117 SNX9Q9Y5X1 595 aa21.96■■□□□ 1.11
TMEM53-207ENST00000468117 SQORQ9Y6N5 450 aa21.96■■□□□ 1.11
TMEM53-207ENST00000468117 TDRD15B5MCY1 1934 aaKnown RBP21.95■■□□□ 1.1
TMEM53-207ENST00000468117 SLU7O95391 586 aaKnown RBP21.95■■□□□ 1.1
TMEM53-207ENST00000468117 CYP1A1P04798 512 aaPredicted RBP21.95■■□□□ 1.1
TMEM53-207ENST00000468117 GPC5P78333 572 aa21.95■■□□□ 1.1
TMEM53-207ENST00000468117 NAA35Q5VZE5 725 aa21.95■■□□□ 1.1
TMEM53-207ENST00000468117 PAPD7Q5XG87 772 aaKnown RBP21.95■■□□□ 1.1
TMEM53-207ENST00000468117 AGMOQ6ZNB7 445 aa21.95■■□□□ 1.1
TMEM53-207ENST00000468117 FAM126BQ8IXS8 530 aa21.95■■□□□ 1.1
TMEM53-207ENST00000468117 LRRN4CLQ8ND94 238 aa21.95■■□□□ 1.1
TMEM53-207ENST00000468117 GSTCDQ8NEC7 633 aa21.95■■□□□ 1.1
TMEM53-207ENST00000468117 TPCN2Q8NHX9 752 aa21.95■■□□□ 1.1
TMEM53-207ENST00000468117 WHAMMQ8TF30 809 aa21.95■■□□□ 1.1
TMEM53-207ENST00000468117 TWNKQ96RR1 684 aa21.95■■□□□ 1.1
TMEM53-207ENST00000468117 CHORDC1Q9UHD1 332 aaPredicted RBP21.95■■□□□ 1.1
TMEM53-207ENST00000468117 CDC23Q9UJX2 597 aa21.95■■□□□ 1.1
TMEM53-207ENST00000468117 PIRO00625 290 aa21.94■■□□□ 1.1
TMEM53-207ENST00000468117 NCK2O43639 380 aa21.94■■□□□ 1.1
TMEM53-207ENST00000468117 CILPO75339 1184 aa21.94■■□□□ 1.1
TMEM53-207ENST00000468117 FTCDO95954 541 aa21.94■■□□□ 1.1
TMEM53-207ENST00000468117 RAD23BP54727 409 aa21.94■■□□□ 1.1
TMEM53-207ENST00000468117 IFI16Q16666 785 aaKnown RBP21.94■■□□□ 1.1
TMEM53-207ENST00000468117 RNF169Q8NCN4 708 aa21.94■■□□□ 1.1
TMEM53-207ENST00000468117 TFAP2BQ92481 460 aa21.94■■□□□ 1.1
TMEM53-207ENST00000468117 PPP1R10Q96QC0 940 aaKnown RBP21.94■■□□□ 1.1
TMEM53-207ENST00000468117 TRAIPQ9BWF2 469 aa21.94■■□□□ 1.1
TMEM53-207ENST00000468117 COG5Q9UP83 839 aa21.94■■□□□ 1.1
TMEM53-207ENST00000468117 SAR1BQ9Y6B6 198 aa21.94■■□□□ 1.1
TMEM53-207ENST00000468117 A0A0U1RQF3 1178 aa21.94■■□□□ 1.1
TMEM53-207ENST00000468117 SRGAP2O75044 1071 aa21.94■■□□□ 1.1
TMEM53-207ENST00000468117 MRPL10Q7Z7H8 261 aaKnown RBP21.94■■□□□ 1.1
TMEM53-207ENST00000468117 DNAJC5GQ8N7S2 189 aa21.94■■□□□ 1.1
TMEM53-207ENST00000468117 CARD6Q9BX69 1037 aa21.94■■□□□ 1.1
TMEM53-207ENST00000468117 ARL5CA6NH57 179 aa21.93■■□□□ 1.1
TMEM53-207ENST00000468117 ZNF623O75123 536 aa21.93■■□□□ 1.1
TMEM53-207ENST00000468117 ATF7P17544 494 aaPredicted RBP21.93■■□□□ 1.1
TMEM53-207ENST00000468117 CYP3A5P20815 502 aa21.93■■□□□ 1.1
TMEM53-207ENST00000468117 RAB27AP51159 221 aa21.93■■□□□ 1.1
TMEM53-207ENST00000468117 NOMO3P69849 1222 aa21.93■■□□□ 1.1
TMEM53-207ENST00000468117 CENPCQ03188 943 aa21.93■■□□□ 1.1
TMEM53-207ENST00000468117 TRIM72Q6ZMU5 477 aa21.93■■□□□ 1.1
TMEM53-207ENST00000468117 LRRC57Q8N9N7 239 aa21.93■■□□□ 1.1
TMEM53-207ENST00000468117 SLC4A11Q8NBS3 891 aa21.93■■□□□ 1.1
TMEM53-207ENST00000468117 CAGE1Q8TC20 777 aa21.93■■□□□ 1.1
TMEM53-207ENST00000468117 ZNF653Q96CK0 615 aa21.93■■□□□ 1.1
TMEM53-207ENST00000468117 RPS6KC1Q96S38 1066 aa21.93■■□□□ 1.1
TMEM53-207ENST00000468117 ELOVL4Q9GZR5 314 aa21.93■■□□□ 1.1
TMEM53-207ENST00000468117 MIOSQ9NXC5 875 aa21.93■■□□□ 1.1
TMEM53-207ENST00000468117 CD19P15391 556 aa21.92■■□□□ 1.1
TMEM53-207ENST00000468117 GTF2F1P35269 517 aaKnown RBP eCLIP21.92■■□□□ 1.1
TMEM53-207ENST00000468117 NSFP46459 744 aaKnown RBP21.92■■□□□ 1.1
TMEM53-207ENST00000468117 INCA1Q0VD86 236 aa21.92■■□□□ 1.1
TMEM53-207ENST00000468117 C2CD6Q53TS8 623 aa21.92■■□□□ 1.1
TMEM53-207ENST00000468117 TLR10Q9BXR5 811 aa21.92■■□□□ 1.1
TMEM53-207ENST00000468117 SEZ6LQ9BYH1 1024 aa21.92■■□□□ 1.1
TMEM53-207ENST00000468117 CTTNBP2NLQ9P2B4 639 aa21.92■■□□□ 1.1
TMEM53-207ENST00000468117 BARX2Q9UMQ3 279 aaPredicted RBP21.92■■□□□ 1.1
TMEM53-207ENST00000468117 GIT1Q9Y2X7 761 aa21.92■■□□□ 1.1
TMEM53-207ENST00000468117 SPTLC1O15269 473 aa21.92■■□□□ 1.1
TMEM53-207ENST00000468117 NDST1P52848 882 aa21.92■■□□□ 1.1
TMEM53-207ENST00000468117 PTPROQ16827 1216 aa21.92■■□□□ 1.1
TMEM53-207ENST00000468117 LRRC8DQ7L1W4 858 aa21.92■■□□□ 1.1
TMEM53-207ENST00000468117 RHOT2Q8IXI1 618 aa21.92■■□□□ 1.1
TMEM53-207ENST00000468117 TMEM176AQ96HP8 235 aa21.92■■□□□ 1.1
TMEM53-207ENST00000468117 CACNG4Q9UBN1 327 aa21.92■■□□□ 1.1
TMEM53-207ENST00000468117 PACSIN2Q9UNF0 486 aaPredicted RBP21.92■■□□□ 1.1
TMEM53-207ENST00000468117 TET1Q8NFU7 2136 aa21.91■■□□□ 1.1
TMEM53-207ENST00000468117 PQBP1O60828 265 aaKnown RBP21.91■■□□□ 1.1
TMEM53-207ENST00000468117 THP07101 528 aa21.91■■□□□ 1.1
TMEM53-207ENST00000468117 PAEPP09466 180 aa21.91■■□□□ 1.1
TMEM53-207ENST00000468117 SCNN1GP51170 649 aa21.91■■□□□ 1.1
TMEM53-207ENST00000468117 ATN1P54259 1190 aaPredicted RBP21.91■■□□□ 1.1
TMEM53-207ENST00000468117 SMYD5Q6GMV2 418 aa21.91■■□□□ 1.1
TMEM53-207ENST00000468117 DAAM2Q86T65 1068 aa21.91■■□□□ 1.1
TMEM53-207ENST00000468117 MCOLN2Q8IZK6 566 aa21.91■■□□□ 1.1
TMEM53-207ENST00000468117 ZNF560Q96MR9 790 aa21.91■■□□□ 1.1
TMEM53-207ENST00000468117 PSMB7Q99436 277 aa21.91■■□□□ 1.1
TMEM53-207ENST00000468117 MRPL45Q9BRJ2 306 aaKnown RBP21.91■■□□□ 1.1
TMEM53-207ENST00000468117 GTF3C4Q9UKN8 822 aa21.91■■□□□ 1.1
TMEM53-207ENST00000468117 SNX12Q9UMY4 172 aa21.91■■□□□ 1.1
TMEM53-207ENST00000468117 KPNA7A9QM74 516 aa21.9■■□□□ 1.1
TMEM53-207ENST00000468117 BUB1BO60566 1050 aaPredicted RBP21.9■■□□□ 1.1
TMEM53-207ENST00000468117 SELPP16109 830 aa21.9■■□□□ 1.1
TMEM53-207ENST00000468117 TUBB2AQ13885 445 aa21.9■■□□□ 1.1
TMEM53-207ENST00000468117 MEI1Q5TIA1 1274 aa21.9■■□□□ 1.1
TMEM53-207ENST00000468117 TSC1Q92574 1164 aa21.9■■□□□ 1.1
TMEM53-207ENST00000468117 TUBB2BQ9BVA1 445 aa21.9■■□□□ 1.1
TMEM53-207ENST00000468117 RSAD1Q9HA92 442 aa21.9■■□□□ 1.1
TMEM53-207ENST00000468117 CNOT8Q9UFF9 292 aaKnown RBP21.9■■□□□ 1.1
TMEM53-207ENST00000468117 SCN5AQ14524 2016 aa21.9■■□□□ 1.1
TMEM53-207ENST00000468117 CYP1A2P05177 515 aa21.9■■□□□ 1.1
TMEM53-207ENST00000468117 LRPAP1P30533 357 aa21.9■■□□□ 1.1
TMEM53-207ENST00000468117 PNPLA4P41247 253 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms