RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 N4BP2L1Q5TBK1 243 aaPredicted RBP13.31□□□□□ -0.28
UBR4-211ENST00000467272 TMEM161BQ8NDZ6 487 aa13.31□□□□□ -0.28
UBR4-211ENST00000467272 SPIRE2Q8WWL2 714 aa13.31□□□□□ -0.28
UBR4-211ENST00000467272 PSMG2Q969U7 264 aa13.31□□□□□ -0.28
UBR4-211ENST00000467272 MMTAG2Q9BU76 263 aaKnown RBP13.31□□□□□ -0.28
UBR4-211ENST00000467272 RUSC1Q9BVN2 902 aa13.31□□□□□ -0.28
UBR4-211ENST00000467272 FOXP1Q9H334 677 aaPredicted RBP13.31□□□□□ -0.28
UBR4-211ENST00000467272 C17orf75Q9HAS0 396 aa13.31□□□□□ -0.28
UBR4-211ENST00000467272 GTSE1Q9NYZ3 720 aa13.31□□□□□ -0.28
UBR4-211ENST00000467272 LAMA5O15230 3695 aa13.31□□□□□ -0.28
UBR4-211ENST00000467272 OR6C75A6NL08 312 aa13.3□□□□□ -0.28
UBR4-211ENST00000467272 EXTL3O43909 919 aa13.3□□□□□ -0.28
UBR4-211ENST00000467272 HIP1RO75146 1068 aa13.3□□□□□ -0.28
UBR4-211ENST00000467272 EPN2O95208 641 aa13.3□□□□□ -0.28
UBR4-211ENST00000467272 PRAMEF12O95522 483 aa13.3□□□□□ -0.28
UBR4-211ENST00000467272 OR4Q2P0C623 313 aa13.3□□□□□ -0.28
UBR4-211ENST00000467272 MAPTP10636 758 aaKnown RBP13.3□□□□□ -0.28
UBR4-211ENST00000467272 CYP3A5P20815 502 aa13.3□□□□□ -0.28
UBR4-211ENST00000467272 MCM4P33991 863 aa13.3□□□□□ -0.28
UBR4-211ENST00000467272 CCT6AP40227 531 aaKnown RBP13.3□□□□□ -0.28
UBR4-211ENST00000467272 TRAPPC10P48553 1259 aa13.3□□□□□ -0.28
UBR4-211ENST00000467272 DUSP4Q13115 394 aa13.3□□□□□ -0.28
UBR4-211ENST00000467272 MYBPC2Q14324 1141 aa13.3□□□□□ -0.28
UBR4-211ENST00000467272 IL17AQ16552 155 aa13.3□□□□□ -0.28
UBR4-211ENST00000467272 ARHGAP29Q52LW3 1261 aa13.3□□□□□ -0.28
UBR4-211ENST00000467272 RINT1Q6NUQ1 792 aa13.3□□□□□ -0.28
UBR4-211ENST00000467272 PKN3Q6P5Z2 889 aa13.3□□□□□ -0.28
UBR4-211ENST00000467272 ZPBP2Q6X784 338 aa13.3□□□□□ -0.28
UBR4-211ENST00000467272 KCNK18Q7Z418 384 aa13.3□□□□□ -0.28
UBR4-211ENST00000467272 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.3□□□□□ -0.28
UBR4-211ENST00000467272 ZC3H10Q96K80 434 aaKnown RBP13.3□□□□□ -0.28
UBR4-211ENST00000467272 PLEKHA5Q9HAU0 1116 aa13.3□□□□□ -0.28
UBR4-211ENST00000467272 IL21Q9HBE4 155 aa13.3□□□□□ -0.28
UBR4-211ENST00000467272 DDX19AQ9NUU7 478 aaKnown RBP13.3□□□□□ -0.28
UBR4-211ENST00000467272 LRWD1Q9UFC0 647 aa13.3□□□□□ -0.28
UBR4-211ENST00000467272 ANGPTL2Q9UKU9 493 aa13.3□□□□□ -0.28
UBR4-211ENST00000467272 WASF3Q9UPY6 502 aa13.3□□□□□ -0.28
UBR4-211ENST00000467272 ASB3Q9Y575 518 aa13.3□□□□□ -0.28
UBR4-211ENST00000467272 KIF26AQ9ULI4 1882 aaPredicted RBP13.29□□□□□ -0.28
UBR4-211ENST00000467272 MTMR11A4FU01 709 aa13.29□□□□□ -0.28
UBR4-211ENST00000467272 CCDC169A6NNP5 214 aa13.29□□□□□ -0.28
UBR4-211ENST00000467272 E9PMD0 336 aa13.29□□□□□ -0.28
UBR4-211ENST00000467272 AKAP3O75969 853 aa13.29□□□□□ -0.28
UBR4-211ENST00000467272 CPB1P15086 417 aa13.29□□□□□ -0.28
UBR4-211ENST00000467272 TYMPP19971 482 aa13.29□□□□□ -0.28
UBR4-211ENST00000467272 GUCY2CP25092 1073 aa13.29□□□□□ -0.28
UBR4-211ENST00000467272 TOB1P50616 345 aaPredicted RBP13.29□□□□□ -0.28
UBR4-211ENST00000467272 YWHAHQ04917 246 aaPredicted RBP13.29□□□□□ -0.28
UBR4-211ENST00000467272 DMP1Q13316 513 aaPredicted RBP13.29□□□□□ -0.28
UBR4-211ENST00000467272 PLD1Q13393 1074 aa13.29□□□□□ -0.28
UBR4-211ENST00000467272 SF3A2Q15428 464 aaKnown RBP13.29□□□□□ -0.28
UBR4-211ENST00000467272 SEZ6Q53EL9 994 aa13.29□□□□□ -0.28
UBR4-211ENST00000467272 TMEM196Q5HYL7 178 aa13.29□□□□□ -0.28
UBR4-211ENST00000467272 DNAJB7Q7Z6W7 309 aaPredicted RBP13.29□□□□□ -0.28
UBR4-211ENST00000467272 TTC9BQ8N6N2 239 aa13.29□□□□□ -0.28
UBR4-211ENST00000467272 CSGALNACT1Q8TDX6 532 aa13.29□□□□□ -0.28
UBR4-211ENST00000467272 GAB3Q8WWW8 586 aa13.29□□□□□ -0.28
UBR4-211ENST00000467272 ZFYVE19Q96K21 471 aa13.29□□□□□ -0.28
UBR4-211ENST00000467272 DRC1Q96MC2 740 aa13.29□□□□□ -0.28
UBR4-211ENST00000467272 FAM83CQ9BQN1 747 aa13.29□□□□□ -0.28
UBR4-211ENST00000467272 KMT5AQ9NQR1 393 aa13.29□□□□□ -0.28
UBR4-211ENST00000467272 TIMM13Q9Y5L4 95 aaPredicted RBP13.29□□□□□ -0.28
UBR4-211ENST00000467272 FREM2Q5SZK8 3169 aa13.29□□□□□ -0.28
UBR4-211ENST00000467272 PDCD11Q14690 1871 aaKnown RBP13.28□□□□□ -0.28
UBR4-211ENST00000467272 OTOL1A6NHN0 477 aaPredicted RBP13.28□□□□□ -0.28
UBR4-211ENST00000467272 SLC16A4O15374 487 aa13.28□□□□□ -0.28
UBR4-211ENST00000467272 CXCL8P10145 99 aa13.28□□□□□ -0.28
UBR4-211ENST00000467272 KPNA1P52294 538 aaPredicted RBP13.28□□□□□ -0.28
UBR4-211ENST00000467272 EPHB3P54753 998 aa13.28□□□□□ -0.28
UBR4-211ENST00000467272 PLCB2Q00722 1185 aa13.28□□□□□ -0.28
UBR4-211ENST00000467272 TNK2Q07912 1038 aa13.28□□□□□ -0.28
UBR4-211ENST00000467272 TRIM29Q14134 588 aa13.28□□□□□ -0.28
UBR4-211ENST00000467272 NOLC1Q14978 699 aaKnown RBP eCLIP13.28□□□□□ -0.28
UBR4-211ENST00000467272 PON2Q15165 354 aa13.28□□□□□ -0.28
UBR4-211ENST00000467272 TTC38Q5R3I4 469 aa13.28□□□□□ -0.28
UBR4-211ENST00000467272 HEATR6Q6AI08 1181 aaKnown RBP13.28□□□□□ -0.28
UBR4-211ENST00000467272 TMEM150AQ86TG1 271 aa13.28□□□□□ -0.28
UBR4-211ENST00000467272 ATAD1Q8NBU5 361 aa13.28□□□□□ -0.28
UBR4-211ENST00000467272 FBXO18Q8NFZ0 1043 aa13.28□□□□□ -0.28
UBR4-211ENST00000467272 PGLYRP2Q96PD5 576 aa13.28□□□□□ -0.28
UBR4-211ENST00000467272 LSM14BQ9BX40 385 aaKnown RBP13.28□□□□□ -0.28
UBR4-211ENST00000467272 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.28□□□□□ -0.28
UBR4-211ENST00000467272 FASNP49327 2511 aaKnown RBP13.27□□□□□ -0.29
UBR4-211ENST00000467272 PP2D1A8MPX8 630 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 TRDMT1O14717 391 aaKnown RBP13.27□□□□□ -0.29
UBR4-211ENST00000467272 PPEF2O14830 753 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 FGF19O95750 216 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 CYP11A1P05108 521 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 CLTAP09496 248 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 ATF6P18850 670 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 U2AF2P26368 475 aaKnown RBP eCLIP13.27□□□□□ -0.295e-8■■■■■ 34.6
UBR4-211ENST00000467272 FOSBP53539 338 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 LILRA4P59901 499 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 GUCY1B3Q02153 619 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 NBR1Q14596 966 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 HYIQ5T013 277 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 STPG1Q5TH74 334 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 FSTL4Q6MZW2 842 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 CACNA2D4Q7Z3S7 1137 aa13.27□□□□□ -0.29
UBR4-211ENST00000467272 KBTBD6Q86V97 674 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms