RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 HMGB1P1B2RPK0 211 aaPredicted RBP12.14□□□□□ -0.47
HPS1-208ENST00000467246 MEFVO15553 781 aaPredicted RBP12.14□□□□□ -0.47
HPS1-208ENST00000467246 B4GALT4O60513 344 aa12.14□□□□□ -0.47
HPS1-208ENST00000467246 KRT19P08727 400 aa12.14□□□□□ -0.47
HPS1-208ENST00000467246 GJC1P36383 396 aa12.14□□□□□ -0.47
HPS1-208ENST00000467246 ADCYAP1R1P41586 468 aa12.14□□□□□ -0.47
HPS1-208ENST00000467246 SSR1P43307 286 aaKnown RBP12.14□□□□□ -0.47
HPS1-208ENST00000467246 FNTAP49354 379 aa12.14□□□□□ -0.47
HPS1-208ENST00000467246 LAMC2Q13753 1193 aa12.14□□□□□ -0.47
HPS1-208ENST00000467246 SURF1Q15526 300 aa12.14□□□□□ -0.47
HPS1-208ENST00000467246 UBAP2Q5T6F2 1119 aaKnown RBP12.14□□□□□ -0.47
HPS1-208ENST00000467246 KDM7AQ6ZMT4 941 aa12.14□□□□□ -0.47
HPS1-208ENST00000467246 CCDC50Q8IVM0 306 aa12.14□□□□□ -0.47
HPS1-208ENST00000467246 WDTC1Q8N5D0 677 aa12.14□□□□□ -0.47
HPS1-208ENST00000467246 FDXACB1Q9BRP7 624 aaPredicted RBP12.14□□□□□ -0.47
HPS1-208ENST00000467246 BCCIPQ9P287 314 aaKnown RBP eCLIP12.14□□□□□ -0.47
HPS1-208ENST00000467246 PNMA3Q9UL41 463 aa12.14□□□□□ -0.47
HPS1-208ENST00000467246 TNFSF13BQ9Y275 285 aa12.14□□□□□ -0.47
HPS1-208ENST00000467246 R3HDM2Q9Y2K5 976 aaKnown RBP12.14□□□□□ -0.47
HPS1-208ENST00000467246 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.14□□□□□ -0.47
HPS1-208ENST00000467246 ASAP2O43150 1006 aa12.14□□□□□ -0.47
HPS1-208ENST00000467246 ERLIN2O94905 339 aa12.14□□□□□ -0.47
HPS1-208ENST00000467246 VTNP04004 478 aa12.14□□□□□ -0.47
HPS1-208ENST00000467246 RALAP11233 206 aa12.14□□□□□ -0.47
HPS1-208ENST00000467246 TCF4P15884 667 aa12.14□□□□□ -0.47
HPS1-208ENST00000467246 HPDP32754 393 aaPredicted RBP12.14□□□□□ -0.47
HPS1-208ENST00000467246 RAP1GAPP47736 663 aa12.14□□□□□ -0.47
HPS1-208ENST00000467246 GUCY1A3Q02108 690 aa12.14□□□□□ -0.47
HPS1-208ENST00000467246 ATP13A4Q4VNC1 1196 aa12.14□□□□□ -0.47
HPS1-208ENST00000467246 ANKS1BQ7Z6G8 1248 aa12.14□□□□□ -0.47
HPS1-208ENST00000467246 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.14□□□□□ -0.47
HPS1-208ENST00000467246 FEZF2Q8TBJ5 459 aa12.14□□□□□ -0.47
HPS1-208ENST00000467246 FAM118BQ9BPY3 351 aa12.14□□□□□ -0.47
HPS1-208ENST00000467246 PARVAQ9NVD7 372 aa12.14□□□□□ -0.47
HPS1-208ENST00000467246 GLTPD2A6NH11 291 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 BTBD19C9JJ37 291 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 EIF3HO15372 352 aaKnown RBP eCLIP12.13□□□□□ -0.47
HPS1-208ENST00000467246 ECEL1O95672 775 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 TNNC2P02585 160 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 SHBGP04278 402 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 IVLP07476 585 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 NFICP08651 508 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 PMS2P54278 862 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 PPP1R7Q15435 360 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 ZNF484Q5JVG2 852 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 MAP1SQ66K74 1059 aaPredicted RBP12.13□□□□□ -0.47
HPS1-208ENST00000467246 RHOT1Q8IXI2 618 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 RNF25Q96BH1 459 aaPredicted RBP12.13□□□□□ -0.47
HPS1-208ENST00000467246 ANKRD36BP1Q96IX9 119 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 CPB2Q96IY4 423 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 MS4A4AQ96JQ5 239 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 RPF1Q9H9Y2 349 aaKnown RBP12.13□□□□□ -0.47
HPS1-208ENST00000467246 SIX4Q9UIU6 781 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 CLEC11AQ9Y240 323 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 SCINQ9Y6U3 715 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 LACTBL1A8MY62 500 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 DCDC2CA8MYV0 355 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 GH1P01241 217 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 STAG3L1P0CL83 205 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 CDH8P55286 799 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 CCNA1P78396 465 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 KRT17Q04695 432 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 AMHR2Q16671 573 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 EMC10Q5UCC4 262 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 SEMA4AQ9H3S1 761 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 KLHL11Q9NVR0 708 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.13□□□□□ -0.47
HPS1-208ENST00000467246 AKT3Q9Y243 479 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 PASKQ96RG2 1323 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 TMEM191CA6NGB0 347 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 TP73O15350 636 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 ZEB2O60315 1214 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 PHKA2P46019 1235 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 ZNF252P-AS1Q0IIN9 211 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 ORC1Q13415 861 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 TRIP13Q15645 432 aaPredicted RBP12.13□□□□□ -0.47
HPS1-208ENST00000467246 WDR72Q3MJ13 1102 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 KRT71Q3SY84 523 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 RUFY4Q6ZNE9 571 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 C1orf127Q8N9H9 656 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 TMEM35BQ8NCS4 154 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 ART4Q93070 314 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 RUNDC3BQ96NL0 473 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 C16orf70Q9BSU1 422 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 KATNBL1Q9H079 304 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 TSPYL1Q9H0U9 437 aa12.13□□□□□ -0.47
HPS1-208ENST00000467246 PABPC3Q9H361 631 aaKnown RBP12.13□□□□□ -0.47
HPS1-208ENST00000467246 PRMT7Q9NVM4 692 aaPredicted RBP12.13□□□□□ -0.47
HPS1-208ENST00000467246 CCL15-CCL14A0A0B4J2E2 113 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 TCRBV5S1A1TA0A578 114 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 PSTPIP1O43586 416 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 PPFIA4O75335 1185 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 SNAI1O95863 264 aaPredicted RBP12.12□□□□□ -0.47
HPS1-208ENST00000467246 TMOD1P28289 359 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 OGDHQ02218 1023 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 IFFO1Q0D2I5 559 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 KLF1Q13351 362 aaPredicted RBP12.12□□□□□ -0.47
HPS1-208ENST00000467246 SLC29A2Q14542 456 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 CCL15Q16663 113 aa12.12□□□□□ -0.47
HPS1-208ENST00000467246 CYP4A22Q5TCH4 519 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms