RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 LRRC23Q53EV4 343 aaPredicted RBP9.12□□□□□ -0.95
HPS4-209ENST00000466781 PLEKHH3Q7Z736 793 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 KRT35Q92764 455 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 PTPRN2Q92932 1015 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 AGPAT1Q99943 283 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 GPR63Q9BZJ6 419 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 NSMCE4AQ9NXX6 385 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 EYA4O95677 639 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 MLNP12872 115 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 VCAM1P19320 739 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 P3H1Q32P28 736 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 C18orf8Q96DM3 657 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 RAD18Q9NS91 495 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 ADGRA2Q96PE1 1338 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 PP2D1A8MPX8 630 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 TBC1D4O60343 1298 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 STAG3L1P0CL83 205 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 GUCY1A2P33402 732 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 ACADSBP45954 432 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 TRPC1P48995 793 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 UBE3AQ05086 875 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 NCAPHQ15003 741 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 DEPDC1Q5TB30 811 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 FRMD5Q7Z6J6 570 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 HORMAD1Q86X24 394 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 SLC25A41Q8N5S1 370 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 C1orf54Q8WWF1 131 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 C17orf80Q9BSJ5 609 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 MTA3Q9BTC8 594 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 KRCC1Q9NPI7 259 aaPredicted RBP9.12□□□□□ -0.95
HPS4-209ENST00000466781 KLHL11Q9NVR0 708 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.12□□□□□ -0.95
HPS4-209ENST00000466781 NWD1Q149M9 1564 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 MANSC4A6NHS7 340 aaPredicted RBP9.12□□□□□ -0.95
HPS4-209ENST00000466781 SLC16A3O15427 465 aaKnown RBP9.12□□□□□ -0.95
HPS4-209ENST00000466781 CCDC159P0C7I6 412 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 SERPINB10P48595 397 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 MAGOHP61326 146 aaKnown RBP9.12□□□□□ -0.95
HPS4-209ENST00000466781 MTFR1Q15390 333 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 DGKDQ16760 1214 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 WDR72Q3MJ13 1102 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 ZRANB3Q5FWF4 1079 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 ERAP2Q6P179 960 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 LRRC8BQ6P9F7 803 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 ERO1BQ86YB8 467 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 ANKMY2Q8IV38 441 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 NUP93Q8N1F7 819 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 TADA1Q96BN2 335 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 CINPQ9BW66 212 aaPredicted RBP9.12□□□□□ -0.95
HPS4-209ENST00000466781 CAPN10Q9HC96 672 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 HPS4Q9NQG7 708 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 IPPQ9Y573 584 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 SPACA6W5XKT8 324 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 MROH1Q8NDA8 1641 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 H7C4K7 107 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 WDR47O94967 919 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 FAM107AO95990 144 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 PDGFRBP09619 1106 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 BRAFP15056 766 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 RFC5P40937 340 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 TMEM132BQ14DG7 1078 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 XKR3Q5GH77 459 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 KIRREL3Q8IZU9 778 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 CATSPER1Q8NEC5 780 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 TMEM143Q96AN5 459 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 APOL5Q9BWW9 433 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 ADNPQ9H2P0 1102 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 WDR35Q9P2L0 1181 aa9.12□□□□□ -0.95
HPS4-209ENST00000466781 SRP72O76094 671 aaKnown RBP9.11□□□□□ -0.95
HPS4-209ENST00000466781 ATP1A1P05023 1023 aaKnown RBP9.11□□□□□ -0.95
HPS4-209ENST00000466781 TRIM49P0CI25 452 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 TRIM49CP0CI26 452 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 CYP2C19P33261 490 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 BAATQ14032 418 aaPredicted RBP9.11□□□□□ -0.95
HPS4-209ENST00000466781 UGP2Q16851 508 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 SHCBP1Q8NEM2 672 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 HSPBP1Q9NZL4 362 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.11□□□□□ -0.95
HPS4-209ENST00000466781 HDAC6Q9UBN7 1215 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 H0Y626 953 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 DYRK3O43781 588 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 TDP2O95551 362 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 APOA1P02647 267 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 PCSK1P29120 753 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 PPP2R2AP63151 447 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 C10orf120Q5SQS8 335 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 C10orf53Q8N6V4 93 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 MLXIPLQ9NP71 852 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 GPR75-ASB3A0A0A6YYF3 556 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 C17orf102A2RUQ5 167 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 CYP26A1O43174 497 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 HNRNPRO43390 633 aaKnown RBP9.11□□□□□ -0.95
HPS4-209ENST00000466781 CLASP2O75122 1294 aaKnown RBP9.11□□□□□ -0.95
HPS4-209ENST00000466781 NDUFB10O96000 172 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 NCKAP1LP55160 1127 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 DHX34Q14147 1143 aaKnown RBP9.11□□□□□ -0.95
HPS4-209ENST00000466781 USP10Q14694 798 aaKnown RBP9.11□□□□□ -0.95
HPS4-209ENST00000466781 SYDE1Q6ZW31 735 aaPredicted RBP9.11□□□□□ -0.95
HPS4-209ENST00000466781 CALML6Q8TD86 181 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 DPF3Q92784 378 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms