RNA–Protein interactions for RNA: ENST00000465534.5

CD55-207, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 1,480 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-207ENST00000465534 NEU1Q99519 415 aa3.93□□□□□ -1.78
CD55-207ENST00000465534 FDXACB1Q9BRP7 624 aaPredicted RBP3.93□□□□□ -1.78
CD55-207ENST00000465534 POLR3GLQ9BT43 218 aa3.93□□□□□ -1.78
CD55-207ENST00000465534 PCGF6Q9BYE7 350 aa3.93□□□□□ -1.78
CD55-207ENST00000465534 B4GALT6Q9UBX8 382 aa3.93□□□□□ -1.78
CD55-207ENST00000465534 THRAP3Q9Y2W1 955 aaKnown RBP3.93□□□□□ -1.78
CD55-207ENST00000465534 SPO11Q9Y5K1 396 aa3.93□□□□□ -1.78
CD55-207ENST00000465534 KIAA1551Q9HCM1 1747 aa3.93□□□□□ -1.78
CD55-207ENST00000465534 ADAMTS13Q76LX8 1427 aa3.93□□□□□ -1.78
CD55-207ENST00000465534 ACEP12821 1306 aa3.93□□□□□ -1.78
CD55-207ENST00000465534 TBKBP1A7MCY6 615 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 B5MCH6 92 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 ELL2O00472 640 aaPredicted RBP3.92□□□□□ -1.78
CD55-207ENST00000465534 PLD2O14939 933 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 ASLP04424 464 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 ATP2B1P20020 1258 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 NOGQ13253 232 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 Q6ZNX1 250 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 FTSJ3Q8IY81 847 aaKnown RBP3.92□□□□□ -1.78
CD55-207ENST00000465534 SECISBP2LQ93073 1101 aaKnown RBP3.92□□□□□ -1.78
CD55-207ENST00000465534 DNAJC7Q99615 494 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 HIRIP3Q9BW71 556 aaPredicted RBP3.92□□□□□ -1.78
CD55-207ENST00000465534 KLK15Q9H2R5 256 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 NCOA5Q9HCD5 579 aaKnown RBP3.92□□□□□ -1.78
CD55-207ENST00000465534 ATP11BQ9Y2G3 1177 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 SCN11AQ9UI33 1791 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 CCDC88AQ3V6T2 1871 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 MED19A0JLT2 244 aaPredicted RBP3.92□□□□□ -1.78
CD55-207ENST00000465534 FAM221BA6H8Z2 402 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 SEC24DO94855 1032 aaPredicted RBP3.92□□□□□ -1.78
CD55-207ENST00000465534 CLSTN1O94985 981 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 CFIP05156 583 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 CD40P25942 277 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 CACNA2D1P54289 1103 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 MGAT5Q09328 741 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 RASA3Q14644 834 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 ESPNLQ6ZVH7 1005 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 PASD1Q8IV76 773 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 ZFP28Q8NHY6 868 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 SPATA18Q8TC71 538 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 GAB3Q8WWW8 586 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 HTATIP2Q9BUP3 242 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 DDX21Q9NR30 783 aaKnown RBP eCLIP3.92□□□□□ -1.78
CD55-207ENST00000465534 FOXJ2Q9P0K8 574 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 LRIT1Q9P2V4 623 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 ZKSCAN5Q9Y2L8 839 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 NOX1Q9Y5S8 564 aa3.92□□□□□ -1.78
CD55-207ENST00000465534 MAP1BP46821 2468 aaKnown RBP3.91□□□□□ -1.78
CD55-207ENST00000465534 KDM6AO15550 1401 aaPredicted RBP3.91□□□□□ -1.78
CD55-207ENST00000465534 QRICH2Q9H0J4 1663 aa3.91□□□□□ -1.78
CD55-207ENST00000465534 A0A1W2PR48 441 aa3.91□□□□□ -1.78
CD55-207ENST00000465534 GPR15P49685 360 aa3.91□□□□□ -1.78
CD55-207ENST00000465534 KRTAP10-6P60371 365 aaPredicted RBP3.91□□□□□ -1.78
CD55-207ENST00000465534 ZNF460Q14592 562 aa3.91□□□□□ -1.78
CD55-207ENST00000465534 UBE3CQ15386 1083 aa3.91□□□□□ -1.78
CD55-207ENST00000465534 BMT2Q1RMZ1 405 aa3.91□□□□□ -1.78
CD55-207ENST00000465534 CREB3L3Q68CJ9 461 aa3.91□□□□□ -1.78
CD55-207ENST00000465534 CNTROBQ8N137 903 aa3.91□□□□□ -1.78
CD55-207ENST00000465534 BRIP1Q9BX63 1249 aa3.91□□□□□ -1.78
CD55-207ENST00000465534 EPHX3Q9H6B9 360 aa3.91□□□□□ -1.78
CD55-207ENST00000465534 ZMAT4Q9H898 229 aa3.91□□□□□ -1.78
CD55-207ENST00000465534 KMT5AQ9NQR1 393 aa3.91□□□□□ -1.78
CD55-207ENST00000465534 PRDM11Q9NQV5 511 aa3.91□□□□□ -1.78
CD55-207ENST00000465534 SNTG2Q9NY99 539 aa3.91□□□□□ -1.78
CD55-207ENST00000465534 CFAP54Q96N23 3096 aa3.91□□□□□ -1.78
CD55-207ENST00000465534 ZFYVE9O95405 1425 aa3.91□□□□□ -1.78
CD55-207ENST00000465534 RIMS2Q9UQ26 1411 aa3.91□□□□□ -1.78
CD55-207ENST00000465534 MTUS2Q5JR59 1369 aa3.9□□□□□ -1.78
CD55-207ENST00000465534 BTAF1O14981 1849 aa3.9□□□□□ -1.78
CD55-207ENST00000465534 PRUNE2Q8WUY3 3088 aa3.9□□□□□ -1.79
CD55-207ENST00000465534 WDR91A4D1P6 747 aa3.9□□□□□ -1.79
CD55-207ENST00000465534 ZFPL1O95159 310 aa3.9□□□□□ -1.79
CD55-207ENST00000465534 ELANEP08246 267 aa3.9□□□□□ -1.79
CD55-207ENST00000465534 FOSL2P15408 326 aa3.9□□□□□ -1.79
CD55-207ENST00000465534 CHN2P52757 468 aa3.9□□□□□ -1.79
CD55-207ENST00000465534 CCDC178Q5BJE1 867 aa3.9□□□□□ -1.79
CD55-207ENST00000465534 ZBTB41Q5SVQ8 909 aa3.9□□□□□ -1.79
CD55-207ENST00000465534 PDZD4Q76G19 769 aaPredicted RBP3.9□□□□□ -1.79
CD55-207ENST00000465534 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.9□□□□□ -1.79
CD55-207ENST00000465534 PHACTR3Q96KR7 559 aa3.9□□□□□ -1.79
CD55-207ENST00000465534 CLUHP3Q96NS8 147 aa3.9□□□□□ -1.79
CD55-207ENST00000465534 SRPK1Q96SB4 655 aaKnown RBP3.9□□□□□ -1.79
CD55-207ENST00000465534 ALOXE3Q9BYJ1 711 aa3.9□□□□□ -1.79
CD55-207ENST00000465534 IFT57Q9NWB7 429 aa3.9□□□□□ -1.79
CD55-207ENST00000465534 OXSMQ9NWU1 459 aa3.9□□□□□ -1.79
CD55-207ENST00000465534 H2AFY2Q9P0M6 372 aaPredicted RBP3.9□□□□□ -1.79
CD55-207ENST00000465534 ZNF70Q9UC06 446 aaPredicted RBP3.9□□□□□ -1.79
CD55-207ENST00000465534 CDC42BPAQ5VT25 1732 aa3.9□□□□□ -1.79
CD55-207ENST00000465534 KIAA0232Q92628 1395 aa3.9□□□□□ -1.79
CD55-207ENST00000465534 CDC42BPGQ6DT37 1551 aa3.89□□□□□ -1.79
CD55-207ENST00000465534 CYSRT1A8MQ03 144 aa3.89□□□□□ -1.79
CD55-207ENST00000465534 CBX4O00257 560 aa3.89□□□□□ -1.79
CD55-207ENST00000465534 PRAMEF4O60810 478 aa3.89□□□□□ -1.79
CD55-207ENST00000465534 PROP1O75360 226 aa3.89□□□□□ -1.79
CD55-207ENST00000465534 PFKMP08237 780 aa3.89□□□□□ -1.79
CD55-207ENST00000465534 PROK1P58294 105 aa3.89□□□□□ -1.79
CD55-207ENST00000465534 EVA1CP58658 441 aa3.89□□□□□ -1.79
CD55-207ENST00000465534 MRPS35P82673 323 aaKnown RBP3.89□□□□□ -1.79
CD55-207ENST00000465534 FNDC3BQ53EP0 1204 aaKnown RBP3.89□□□□□ -1.79
CD55-207ENST00000465534 AGAP9Q5VTM2 703 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms