RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 SLC8A2Q9UPR5 921 aa10.69□□□□□ -0.7
USP39-212ENST00000465514 ARHGEF35A5YM69 484 aa10.68□□□□□ -0.7
USP39-212ENST00000465514 PATE3B3GLJ2 98 aa10.68□□□□□ -0.7
USP39-212ENST00000465514 ACKR2O00590 384 aa10.68□□□□□ -0.7
USP39-212ENST00000465514 PRRG1O14668 218 aa10.68□□□□□ -0.7
USP39-212ENST00000465514 KHNYNO15037 678 aaKnown RBP10.68□□□□□ -0.7
USP39-212ENST00000465514 RECQL4O94761 1208 aa10.68□□□□□ -0.7
USP39-212ENST00000465514 RHOBTB1O94844 696 aa10.68□□□□□ -0.7
USP39-212ENST00000465514 MICAL2O94851 1124 aa10.68□□□□□ -0.7
USP39-212ENST00000465514 PRB1P04280 392 aa10.68□□□□□ -0.7
USP39-212ENST00000465514 EDN1P05305 212 aa10.68□□□□□ -0.7
USP39-212ENST00000465514 PRKCBP05771 671 aa10.68□□□□□ -0.7
USP39-212ENST00000465514 THP07101 528 aa10.68□□□□□ -0.7
USP39-212ENST00000465514 NEFLP07196 543 aa10.68□□□□□ -0.7
USP39-212ENST00000465514 GJA1P17302 382 aa10.68□□□□□ -0.7
USP39-212ENST00000465514 LIG1P18858 919 aa10.68□□□□□ -0.7
USP39-212ENST00000465514 CYP11B2P19099 503 aa10.68□□□□□ -0.7
USP39-212ENST00000465514 RPA1P27694 616 aa10.68□□□□□ -0.7
USP39-212ENST00000465514 SCAPQ12770 1279 aa10.68□□□□□ -0.7
USP39-212ENST00000465514 ELAVL2Q12926 359 aaKnown RBP10.68□□□□□ -0.7
USP39-212ENST00000465514 NAB2Q15742 525 aa10.68□□□□□ -0.7
USP39-212ENST00000465514 MAPK6Q16659 721 aa10.68□□□□□ -0.7
USP39-212ENST00000465514 EEF1DP3Q658K8 133 aa10.68□□□□□ -0.7
USP39-212ENST00000465514 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.68□□□□□ -0.7
USP39-212ENST00000465514 ERMNQ8TAM6 284 aa10.68□□□□□ -0.7
USP39-212ENST00000465514 DEPTORQ8TB45 409 aa10.68□□□□□ -0.7
USP39-212ENST00000465514 HNRNPLLQ8WVV9 542 aaKnown RBP10.68□□□□□ -0.7
USP39-212ENST00000465514 CCDC113Q9H0I3 377 aa10.68□□□□□ -0.7
USP39-212ENST00000465514 TRPV4Q9HBA0 871 aa10.68□□□□□ -0.7
USP39-212ENST00000465514 POLD4Q9HCU8 107 aa10.68□□□□□ -0.7
USP39-212ENST00000465514 POLR3BQ9NW08 1133 aaPredicted RBP10.68□□□□□ -0.7
USP39-212ENST00000465514 PTPRBP23467 1997 aa10.68□□□□□ -0.7
USP39-212ENST00000465514 PTPRDP23468 1912 aa10.68□□□□□ -0.7
USP39-212ENST00000465514 GON4LQ3T8J9 2241 aa10.68□□□□□ -0.7
USP39-212ENST00000465514 URB1O60287 2271 aaKnown RBP10.67□□□□□ -0.7
USP39-212ENST00000465514 FAM221BA6H8Z2 402 aa10.67□□□□□ -0.7
USP39-212ENST00000465514 CHADO15335 359 aa10.67□□□□□ -0.7
USP39-212ENST00000465514 MOSPD3O75425 235 aa10.67□□□□□ -0.7
USP39-212ENST00000465514 OR52Z1P0C646 297 aa10.67□□□□□ -0.7
USP39-212ENST00000465514 FGFR3P22607 806 aa10.67□□□□□ -0.7
USP39-212ENST00000465514 NAMPTP43490 491 aa10.67□□□□□ -0.7
USP39-212ENST00000465514 FCHO2Q0JRZ9 810 aa10.67□□□□□ -0.7
USP39-212ENST00000465514 C19orf57Q0VDD7 668 aa10.67□□□□□ -0.7
USP39-212ENST00000465514 CYP4A22Q5TCH4 519 aa10.67□□□□□ -0.7
USP39-212ENST00000465514 HS6ST3Q8IZP7 471 aa10.67□□□□□ -0.7
USP39-212ENST00000465514 CHCHD4Q8N4Q1 142 aa10.67□□□□□ -0.7
USP39-212ENST00000465514 ZFYVE19Q96K21 471 aa10.67□□□□□ -0.7
USP39-212ENST00000465514 C8orf76Q96K31 380 aa10.67□□□□□ -0.7
USP39-212ENST00000465514 HHIPQ96QV1 700 aa10.67□□□□□ -0.7
USP39-212ENST00000465514 ADPGKQ9BRR6 497 aa10.67□□□□□ -0.7
USP39-212ENST00000465514 SLC32A1Q9H598 525 aa10.67□□□□□ -0.7
USP39-212ENST00000465514 SLITRK6Q9H5Y7 841 aa10.67□□□□□ -0.7
USP39-212ENST00000465514 GTSE1Q9NYZ3 720 aa10.67□□□□□ -0.7
USP39-212ENST00000465514 GDAQ9Y2T3 454 aa10.67□□□□□ -0.7
USP39-212ENST00000465514 MYL4P12829 197 aa10.66□□□□□ -0.7
USP39-212ENST00000465514 IGFBP6P24592 240 aaPredicted RBP10.66□□□□□ -0.7
USP39-212ENST00000465514 TKTP29401 623 aaKnown RBP10.66□□□□□ -0.7
USP39-212ENST00000465514 GBP1P32455 592 aa10.66□□□□□ -0.7
USP39-212ENST00000465514 CCT6AP40227 531 aaKnown RBP10.66□□□□□ -0.7
USP39-212ENST00000465514 IRX4P78413 519 aa10.66□□□□□ -0.7
USP39-212ENST00000465514 ROR1Q01973 937 aa10.66□□□□□ -0.7
USP39-212ENST00000465514 ORC2Q13416 577 aaPredicted RBP10.66□□□□□ -0.7
USP39-212ENST00000465514 KARSQ15046 597 aaKnown RBP10.66□□□□□ -0.7
USP39-212ENST00000465514 PPP2R5AQ15172 486 aa10.66□□□□□ -0.7
USP39-212ENST00000465514 TEAD2Q15562 447 aa10.66□□□□□ -0.7
USP39-212ENST00000465514 ECM1Q16610 540 aa10.66□□□□□ -0.7
USP39-212ENST00000465514 DCAF4L1Q3SXM0 396 aa10.66□□□□□ -0.7
USP39-212ENST00000465514 TTC38Q5R3I4 469 aa10.66□□□□□ -0.7
USP39-212ENST00000465514 NT5DC1Q5TFE4 455 aa10.66□□□□□ -0.7
USP39-212ENST00000465514 CCDC83Q8IWF9 413 aa10.66□□□□□ -0.7
USP39-212ENST00000465514 DDX27Q96GQ7 796 aaKnown RBP10.66□□□□□ -0.7
USP39-212ENST00000465514 IFT74Q96LB3 600 aa10.66□□□□□ -0.7
USP39-212ENST00000465514 KIFC3Q9BVG8 833 aa10.66□□□□□ -0.7
USP39-212ENST00000465514 FOXP1Q9H334 677 aaPredicted RBP10.66□□□□□ -0.7
USP39-212ENST00000465514 PPP4R2Q9NY27 417 aa10.66□□□□□ -0.7
USP39-212ENST00000465514 LIMCH1Q9UPQ0 1083 aa10.66□□□□□ -0.7
USP39-212ENST00000465514 INSL5Q9Y5Q6 135 aa10.66□□□□□ -0.7
USP39-212ENST00000465514 CITO14578 2027 aa10.66□□□□□ -0.7
USP39-212ENST00000465514 ZNF638Q14966 1978 aaKnown RBP10.66□□□□□ -0.7
USP39-212ENST00000465514 CEP192Q8TEP8 1941 aa10.65□□□□□ -0.7
USP39-212ENST00000465514 H0Y626 953 aa10.65□□□□□ -0.7
USP39-212ENST00000465514 TRIM16O95361 564 aa10.65□□□□□ -0.7
USP39-212ENST00000465514 SEC24AO95486 1093 aa10.65□□□□□ -0.7
USP39-212ENST00000465514 MUTP22033 750 aa10.65□□□□□ -0.7
USP39-212ENST00000465514 ELF1P32519 619 aa10.65□□□□□ -0.7
USP39-212ENST00000465514 MAPK8P45983 427 aa10.65□□□□□ -0.7
USP39-212ENST00000465514 EFNA5P52803 228 aa10.65□□□□□ -0.7
USP39-212ENST00000465514 TNK2Q07912 1038 aa10.65□□□□□ -0.7
USP39-212ENST00000465514 GLRA4Q5JXX5 417 aa10.65□□□□□ -0.7
USP39-212ENST00000465514 ATF7IP2Q5U623 682 aa10.65□□□□□ -0.7
USP39-212ENST00000465514 HAUS3Q68CZ6 603 aa10.65□□□□□ -0.7
USP39-212ENST00000465514 CYP2U1Q7Z449 544 aa10.65□□□□□ -0.7
USP39-212ENST00000465514 GPIHBP1Q8IV16 184 aa10.65□□□□□ -0.7
USP39-212ENST00000465514 ELMOD1Q8N336 334 aa10.65□□□□□ -0.7
USP39-212ENST00000465514 CAMKK1Q8N5S9 505 aa10.65□□□□□ -0.7
USP39-212ENST00000465514 C4orf32Q8N8J7 132 aa10.65□□□□□ -0.7
USP39-212ENST00000465514 ZNF461Q8TAF7 563 aa10.65□□□□□ -0.7
USP39-212ENST00000465514 KIFAP3Q92845 792 aa10.65□□□□□ -0.7
USP39-212ENST00000465514 E2F7Q96AV8 911 aa10.65□□□□□ -0.7
USP39-212ENST00000465514 PPP1R10Q96QC0 940 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms