RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 PHOSPHO2Q8TCD6 241 aa14.34□□□□□ -0.11
ATF3-208ENST00000465155 JAKMIP2Q96AA8 810 aa14.34□□□□□ -0.11
ATF3-208ENST00000465155 TMEM175Q9BSA9 504 aa14.34□□□□□ -0.11
ATF3-208ENST00000465155 SDCBP2Q9H190 292 aa14.34□□□□□ -0.11
ATF3-208ENST00000465155 CWH43Q9H720 699 aa14.34□□□□□ -0.11
ATF3-208ENST00000465155 I3L4J1 428 aa14.33□□□□□ -0.11
ATF3-208ENST00000465155 CYB561D2O14569 222 aa14.33□□□□□ -0.11
ATF3-208ENST00000465155 HUS1O60921 280 aa14.33□□□□□ -0.11
ATF3-208ENST00000465155 GFPT2O94808 682 aa14.33□□□□□ -0.11
ATF3-208ENST00000465155 KRT5P13647 590 aa14.33□□□□□ -0.11
ATF3-208ENST00000465155 DEKP35659 375 aaKnown RBP14.33□□□□□ -0.11
ATF3-208ENST00000465155 PBX3P40426 434 aa14.33□□□□□ -0.11
ATF3-208ENST00000465155 BRCC3P46736 316 aa14.33□□□□□ -0.11
ATF3-208ENST00000465155 AARSP49588 968 aaKnown RBP eCLIP14.33□□□□□ -0.11
ATF3-208ENST00000465155 HTRA4P83105 476 aaPredicted RBP14.33□□□□□ -0.11
ATF3-208ENST00000465155 ARID5AQ03989 594 aa14.33□□□□□ -0.11
ATF3-208ENST00000465155 SHHQ15465 462 aa14.33□□□□□ -0.11
ATF3-208ENST00000465155 TIGD5Q53EQ6 642 aa14.33□□□□□ -0.11
ATF3-208ENST00000465155 RASIP1Q5U651 963 aa14.33□□□□□ -0.11
ATF3-208ENST00000465155 E4F1Q66K89 784 aaPredicted RBP14.33□□□□□ -0.11
ATF3-208ENST00000465155 CD300LGQ6UXG3 332 aa14.33□□□□□ -0.11
ATF3-208ENST00000465155 DSTYKQ6XUX3 929 aa14.33□□□□□ -0.11
ATF3-208ENST00000465155 APPL2Q8NEU8 664 aa14.33□□□□□ -0.11
ATF3-208ENST00000465155 SENP8Q96LD8 212 aa14.33□□□□□ -0.11
ATF3-208ENST00000465155 RNPC3Q96LT9 517 aaKnown RBP14.33□□□□□ -0.11
ATF3-208ENST00000465155 PANX2Q96RD6 677 aa14.33□□□□□ -0.11
ATF3-208ENST00000465155 CYP3A43Q9HB55 503 aa14.33□□□□□ -0.11
ATF3-208ENST00000465155 CISHQ9NSE2 258 aa14.33□□□□□ -0.11
ATF3-208ENST00000465155 FAN1Q9Y2M0 1017 aa14.33□□□□□ -0.11
ATF3-208ENST00000465155 PCDHB4Q9Y5E5 795 aa14.33□□□□□ -0.11
ATF3-208ENST00000465155 NT5C1B-RDH14C9J2C7 533 aa14.33□□□□□ -0.12
ATF3-208ENST00000465155 TMEM189-UBE2V1I3L0A0 370 aa14.33□□□□□ -0.12
ATF3-208ENST00000465155 GALTP07902 379 aa14.33□□□□□ -0.12
ATF3-208ENST00000465155 ACO1P21399 889 aaKnown RBP14.33□□□□□ -0.12
ATF3-208ENST00000465155 ALDH7A1P49419 539 aaKnown RBP14.33□□□□□ -0.12
ATF3-208ENST00000465155 BCAR1P56945 870 aa14.33□□□□□ -0.12
ATF3-208ENST00000465155 YWHAEP62258 255 aaKnown RBP14.33□□□□□ -0.12
ATF3-208ENST00000465155 ASIC2Q16515 512 aa14.33□□□□□ -0.12
ATF3-208ENST00000465155 SOWAHAQ2M3V2 549 aa14.33□□□□□ -0.12
ATF3-208ENST00000465155 TMEM270Q6UE05 265 aa14.33□□□□□ -0.12
ATF3-208ENST00000465155 LRRC8AQ8IWT6 810 aa14.33□□□□□ -0.12
ATF3-208ENST00000465155 FAM71AQ8IYT1 594 aa14.33□□□□□ -0.12
ATF3-208ENST00000465155 UBR7Q8N806 425 aa14.33□□□□□ -0.12
ATF3-208ENST00000465155 SYN2Q92777 582 aaPredicted RBP14.33□□□□□ -0.12
ATF3-208ENST00000465155 COLEC11Q9BWP8 271 aa14.33□□□□□ -0.12
ATF3-208ENST00000465155 ZNHIT6Q9NWK9 470 aaKnown RBP14.33□□□□□ -0.12
ATF3-208ENST00000465155 AIPL1Q9NZN9 384 aa14.33□□□□□ -0.12
ATF3-208ENST00000465155 L1RE1Q9UN81 338 aa14.33□□□□□ -0.12
ATF3-208ENST00000465155 INSL6Q9Y581 213 aa14.33□□□□□ -0.12
ATF3-208ENST00000465155 MRPL42Q9Y6G3 142 aaKnown RBP14.33□□□□□ -0.12
ATF3-208ENST00000465155 TSC2P49815 1807 aa14.32□□□□□ -0.12
ATF3-208ENST00000465155 H0YGN5 161 aa14.32□□□□□ -0.12
ATF3-208ENST00000465155 TLL1O43897 1013 aa14.32□□□□□ -0.12
ATF3-208ENST00000465155 TADA2AO75478 443 aa14.32□□□□□ -0.12
ATF3-208ENST00000465155 PAX3P23760 479 aa14.32□□□□□ -0.12
ATF3-208ENST00000465155 ZNF394Q53GI3 561 aa14.32□□□□□ -0.12
ATF3-208ENST00000465155 FMNL3Q8IVF7 1028 aa14.32□□□□□ -0.12
ATF3-208ENST00000465155 TOP6BLQ8N6T0 577 aa14.32□□□□□ -0.12
ATF3-208ENST00000465155 RAD9AQ99638 391 aa14.32□□□□□ -0.12
ATF3-208ENST00000465155 MRPL45Q9BRJ2 306 aaKnown RBP14.32□□□□□ -0.12
ATF3-208ENST00000465155 UBE2OQ9C0C9 1292 aaKnown RBP14.32□□□□□ -0.12
ATF3-208ENST00000465155 ADAM28Q9UKQ2 775 aa14.32□□□□□ -0.12
ATF3-208ENST00000465155 GBF1Q92538 1859 aa14.31□□□□□ -0.12
ATF3-208ENST00000465155 CYP26A1O43174 497 aa14.31□□□□□ -0.12
ATF3-208ENST00000465155 ODC1P11926 461 aa14.31□□□□□ -0.12
ATF3-208ENST00000465155 FERP16591 822 aa14.31□□□□□ -0.12
ATF3-208ENST00000465155 HNRNPH3P31942 346 aaKnown RBP14.31□□□□□ -0.12
ATF3-208ENST00000465155 WDR59Q6PJI9 974 aa14.31□□□□□ -0.12
ATF3-208ENST00000465155 DPH6Q7L8W6 267 aa14.31□□□□□ -0.12
ATF3-208ENST00000465155 LIMS2Q7Z4I7 341 aa14.31□□□□□ -0.12
ATF3-208ENST00000465155 IRF2BP2Q7Z5L9 587 aa14.31□□□□□ -0.12
ATF3-208ENST00000465155 ADGRF2Q8IZF7 708 aa14.31□□□□□ -0.12
ATF3-208ENST00000465155 PDCL2Q8N4E4 241 aa14.31□□□□□ -0.12
ATF3-208ENST00000465155 FIBCD1Q8N539 461 aa14.31□□□□□ -0.12
ATF3-208ENST00000465155 RBBP8NLQ8NC74 664 aaPredicted RBP14.31□□□□□ -0.12
ATF3-208ENST00000465155 SUSD3Q96L08 255 aa14.31□□□□□ -0.12
ATF3-208ENST00000465155 ZNF558Q96NG5 402 aa14.31□□□□□ -0.12
ATF3-208ENST00000465155 GDF15Q99988 308 aa14.31□□□□□ -0.12
ATF3-208ENST00000465155 MARCH5Q9NX47 278 aa14.31□□□□□ -0.12
ATF3-208ENST00000465155 CNTN6Q9UQ52 1028 aa14.31□□□□□ -0.12
ATF3-208ENST00000465155 TIMM13Q9Y5L4 95 aaPredicted RBP14.31□□□□□ -0.12
ATF3-208ENST00000465155 M0QZQ0 153 aa14.3□□□□□ -0.12
ATF3-208ENST00000465155 TRAPPC3O43617 180 aa14.3□□□□□ -0.12
ATF3-208ENST00000465155 CILPO75339 1184 aa14.3□□□□□ -0.12
ATF3-208ENST00000465155 TACC1O75410 805 aa14.3□□□□□ -0.12
ATF3-208ENST00000465155 CCDC172P0C7W6 258 aa14.3□□□□□ -0.12
ATF3-208ENST00000465155 SKILP12757 684 aa14.3□□□□□ -0.12
ATF3-208ENST00000465155 LAG3P18627 525 aa14.3□□□□□ -0.12
ATF3-208ENST00000465155 CLCN1P35523 988 aa14.3□□□□□ -0.12
ATF3-208ENST00000465155 NDST1P52848 882 aa14.3□□□□□ -0.12
ATF3-208ENST00000465155 KLHL30Q0D2K2 578 aa14.3□□□□□ -0.12
ATF3-208ENST00000465155 INCA1Q0VD86 236 aa14.3□□□□□ -0.12
ATF3-208ENST00000465155 MEA1Q16626 185 aa14.3□□□□□ -0.12
ATF3-208ENST00000465155 TDRD12Q587J7 1177 aaKnown RBP14.3□□□□□ -0.12
ATF3-208ENST00000465155 WSCD1Q658N2 575 aa14.3□□□□□ -0.12
ATF3-208ENST00000465155 KCNT2Q6UVM3 1135 aa14.3□□□□□ -0.12
ATF3-208ENST00000465155 TMEM173Q86WV6 379 aaPredicted RBP14.3□□□□□ -0.12
ATF3-208ENST00000465155 TTC39CQ8N584 583 aa14.3□□□□□ -0.12
ATF3-208ENST00000465155 COLGALT1Q8NBJ5 622 aa14.3□□□□□ -0.12
ATF3-208ENST00000465155 OR6B3Q8NGW1 331 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms