RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 ZNF280DQ6N043 979 aa15.62■□□□□ 0.09
SQSTM1-205ENST00000464493 TTI2Q6NXR4 508 aa15.62■□□□□ 0.09
SQSTM1-205ENST00000464493 LILRA6Q6PI73 481 aa15.62■□□□□ 0.09
SQSTM1-205ENST00000464493 METTL23Q86XA0 190 aa15.62■□□□□ 0.09
SQSTM1-205ENST00000464493 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.62■□□□□ 0.09
SQSTM1-205ENST00000464493 CEP63Q96MT8 703 aa15.62■□□□□ 0.09
SQSTM1-205ENST00000464493 ASB2Q96Q27 587 aa15.62■□□□□ 0.09
SQSTM1-205ENST00000464493 DUSP9Q99956 384 aaKnown RBP15.62■□□□□ 0.09
SQSTM1-205ENST00000464493 OXCT2Q9BYC2 517 aaPredicted RBP15.62■□□□□ 0.09
SQSTM1-205ENST00000464493 DZANK1Q9NVP4 752 aa15.62■□□□□ 0.09
SQSTM1-205ENST00000464493 GDAP2Q9NXN4 497 aa15.62■□□□□ 0.09
SQSTM1-205ENST00000464493 FBXL5Q9UKA1 691 aa15.62■□□□□ 0.09
SQSTM1-205ENST00000464493 PLXNA3P51805 1871 aa15.62■□□□□ 0.09
SQSTM1-205ENST00000464493 CYP11A1P05108 521 aa15.61■□□□□ 0.09
SQSTM1-205ENST00000464493 SPATA31D3P0C874 917 aa15.61■□□□□ 0.09
SQSTM1-205ENST00000464493 NLRP12P59046 1061 aa15.61■□□□□ 0.09
SQSTM1-205ENST00000464493 MCCD1P59942 119 aaPredicted RBP15.61■□□□□ 0.09
SQSTM1-205ENST00000464493 PUS10Q3MIT2 529 aaKnown RBP15.61■□□□□ 0.09
SQSTM1-205ENST00000464493 TDRD10Q5VZ19 366 aaKnown RBP15.61■□□□□ 0.09
SQSTM1-205ENST00000464493 SYCE2Q6PIF2 218 aa15.61■□□□□ 0.09
SQSTM1-205ENST00000464493 ELMSAN1Q6PJG2 1045 aa15.61■□□□□ 0.09
SQSTM1-205ENST00000464493 SPATA31D4Q6ZUB0 917 aa15.61■□□□□ 0.09
SQSTM1-205ENST00000464493 FILIP1Q7Z7B0 1213 aa15.61■□□□□ 0.09
SQSTM1-205ENST00000464493 HDAC7Q8WUI4 952 aa15.61■□□□□ 0.09
SQSTM1-205ENST00000464493 PLEKHA4Q9H4M7 779 aa15.61■□□□□ 0.09
SQSTM1-205ENST00000464493 MAN1C1Q9NR34 630 aa15.61■□□□□ 0.09
SQSTM1-205ENST00000464493 RWDD2AQ9UIY3 292 aa15.61■□□□□ 0.09
SQSTM1-205ENST00000464493 SNX9Q9Y5X1 595 aa15.61■□□□□ 0.09
SQSTM1-205ENST00000464493 MTCL1Q9Y4B5 1905 aaKnown RBP15.6■□□□□ 0.09
SQSTM1-205ENST00000464493 A0A0C4DFX4 3053 aa15.6■□□□□ 0.09
SQSTM1-205ENST00000464493 SPDYE4A6NLX3 237 aa15.6■□□□□ 0.09
SQSTM1-205ENST00000464493 HUS1O60921 280 aa15.6■□□□□ 0.09
SQSTM1-205ENST00000464493 TRIM49P0CI25 452 aa15.6■□□□□ 0.09
SQSTM1-205ENST00000464493 TRIM49CP0CI26 452 aa15.6■□□□□ 0.09
SQSTM1-205ENST00000464493 ATICP31939 592 aa15.6■□□□□ 0.09
SQSTM1-205ENST00000464493 KCNQ1P51787 676 aa15.6■□□□□ 0.09
SQSTM1-205ENST00000464493 ARPP19P56211 112 aa15.6■□□□□ 0.09
SQSTM1-205ENST00000464493 ZACNQ401N2 412 aa15.6■□□□□ 0.09
SQSTM1-205ENST00000464493 WSCD1Q658N2 575 aa15.6■□□□□ 0.09
SQSTM1-205ENST00000464493 PTCRAQ6ISU1 281 aaPredicted RBP15.6■□□□□ 0.09
SQSTM1-205ENST00000464493 RBM43Q6ZSC3 357 aaKnown RBP15.6■□□□□ 0.09
SQSTM1-205ENST00000464493 SV2AQ7L0J3 742 aa15.6■□□□□ 0.09
SQSTM1-205ENST00000464493 SMRP1Q8NCR6 262 aa15.6■□□□□ 0.09
SQSTM1-205ENST00000464493 KREMEN2Q8NCW0 462 aa15.6■□□□□ 0.09
SQSTM1-205ENST00000464493 ZNF461Q8TAF7 563 aa15.6■□□□□ 0.09
SQSTM1-205ENST00000464493 APOL5Q9BWW9 433 aa15.6■□□□□ 0.09
SQSTM1-205ENST00000464493 S1PR5Q9H228 398 aa15.6■□□□□ 0.09
SQSTM1-205ENST00000464493 ARMCX3Q9UH62 379 aaPredicted RBP15.6■□□□□ 0.09
SQSTM1-205ENST00000464493 WDR27A2RRH5 827 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 GRXCR2A6NFK2 248 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 OR6C75A6NL08 312 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 MBTPS2O43462 519 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 ABLIM3O94929 683 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 VNN1O95497 513 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 FGFR1OPO95684 399 aaKnown RBP15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 STAU1O95793 577 aaKnown RBP15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 GTF2H1P32780 548 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 GCLMP48507 274 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 MYL6P60660 151 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 ROR1Q01973 937 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 PPP3CAQ08209 521 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 SMAD4Q13485 552 aaKnown RBP15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 NCOA4Q13772 614 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 DPCR1Q3MIW9 517 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 CCDC183Q5T5S1 534 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 C15orf39Q6ZRI6 1047 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 DPH6Q7L8W6 267 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 FRMD5Q7Z6J6 570 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 THEM5Q8N1Q8 247 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 TMEM86AQ8N2M4 240 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 PDCL2Q8N4E4 241 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 TOP6BLQ8N6T0 577 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 C12orf76Q8N812 135 aaPredicted RBP15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 SYAP1Q96A49 352 aaPredicted RBP15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 SRRTQ9BXP5 876 aaKnown RBP15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 XYLT2Q9H1B5 865 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 ADAM7Q9H2U9 754 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 MMRN2Q9H8L6 949 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 SFXN1Q9H9B4 322 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 METTL14Q9HCE5 456 aaKnown RBP15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 DACH1Q9UI36 760 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 FBXW11Q9UKB1 542 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 L1RE1Q9UN81 338 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 FAM50BQ9Y247 325 aa15.59■□□□□ 0.09
SQSTM1-205ENST00000464493 VCANP13611 3396 aa15.58■□□□□ 0.09
SQSTM1-205ENST00000464493 STX10O60499 249 aa15.58■□□□□ 0.08
SQSTM1-205ENST00000464493 GNA14O95837 355 aa15.58■□□□□ 0.08
SQSTM1-205ENST00000464493 BMP1P13497 986 aa15.58■□□□□ 0.08
SQSTM1-205ENST00000464493 ITIH3Q06033 890 aa15.58■□□□□ 0.08
SQSTM1-205ENST00000464493 SOWAHAQ2M3V2 549 aa15.58■□□□□ 0.08
SQSTM1-205ENST00000464493 SGSM1Q2NKQ1 1148 aa15.58■□□□□ 0.08
SQSTM1-205ENST00000464493 WDR72Q3MJ13 1102 aa15.58■□□□□ 0.08
SQSTM1-205ENST00000464493 CCDC40Q4G0X9 1142 aa15.58■□□□□ 0.08
SQSTM1-205ENST00000464493 TJAP1Q5JTD0 557 aa15.58■□□□□ 0.08
SQSTM1-205ENST00000464493 RARS2Q5T160 578 aaKnown RBP15.58■□□□□ 0.08
SQSTM1-205ENST00000464493 TCERG1LQ5VWI1 586 aa15.58■□□□□ 0.08
SQSTM1-205ENST00000464493 TPGS2Q68CL5 300 aa15.58■□□□□ 0.08
SQSTM1-205ENST00000464493 CES5AQ6NT32 575 aa15.58■□□□□ 0.08
SQSTM1-205ENST00000464493 MMS19Q96T76 1030 aa15.58■□□□□ 0.08
SQSTM1-205ENST00000464493 VRTNQ9H8Y1 702 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms