RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 EDAQ92838 391 aa4.5□□□□□ -1.69
HMGXB4-205ENST00000464480 RIPOR3Q96MK2 946 aa4.5□□□□□ -1.69
HMGXB4-205ENST00000464480 KLHL32Q96NJ5 620 aa4.5□□□□□ -1.69
HMGXB4-205ENST00000464480 RBM15Q96T37 977 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGXB4-205ENST00000464480 PNKPQ96T60 521 aa4.5□□□□□ -1.69
HMGXB4-205ENST00000464480 SMOQ99835 787 aa4.5□□□□□ -1.69
HMGXB4-205ENST00000464480 ZNF518BQ9C0D4 1074 aa4.5□□□□□ -1.69
HMGXB4-205ENST00000464480 RNPEPQ9H4A4 650 aa4.5□□□□□ -1.69
HMGXB4-205ENST00000464480 SERHLQ9NQF3 203 aa4.5□□□□□ -1.69
HMGXB4-205ENST00000464480 STK32BQ9NY57 414 aa4.5□□□□□ -1.69
HMGXB4-205ENST00000464480 EIF2B4Q9UI10 523 aaKnown RBP4.5□□□□□ -1.69
HMGXB4-205ENST00000464480 TAGLN3Q9UI15 199 aa4.5□□□□□ -1.69
HMGXB4-205ENST00000464480 DMTF1Q9Y222 760 aa4.5□□□□□ -1.69
HMGXB4-205ENST00000464480 CDYLQ9Y232 598 aa4.5□□□□□ -1.69
HMGXB4-205ENST00000464480 ATP11BQ9Y2G3 1177 aa4.5□□□□□ -1.69
HMGXB4-205ENST00000464480 A0A0G2JLL6 359 aaPredicted RBP4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 TRIM43BA6NCK2 446 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 MBD3L4A6NDZ8 208 aaPredicted RBP4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 MBD3L3A6NE82 208 aaPredicted RBP4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 POM121BA6NF01 834 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 TRIM24O15164 1050 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 EIF3JO75822 258 aaKnown RBP4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 DNAJB5O75953 348 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 RECQL4O94761 1208 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 PIM1P11309 404 aaPredicted RBP4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 FCER1AP12319 257 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 HOXA5P20719 270 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 TNFSF4P23510 183 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 SERPINB3P29508 390 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 APOBEC3AP31941 199 aaPredicted RBP4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 RPS16P62249 146 aaKnown RBP4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 SLFN5Q08AF3 891 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 ZNF844Q08AG5 666 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 ZNF543Q08ER8 600 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 ICAM4Q14773 271 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 NOMO2Q5JPE7 1267 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 C3orf38Q5JPI3 329 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 FAM102AQ5T9C2 384 aaPredicted RBP4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 AGAP9Q5VTM2 703 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 FAM160B1Q5W0V3 765 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 XRRA1Q6P2D8 792 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 Q6ZRM9 215 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 Q6ZSN1 163 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 SYT12Q8IV01 421 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 MPP5Q8N3R9 675 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 TTC9BQ8N6N2 239 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 CHST13Q8NET6 341 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 DEPTORQ8TB45 409 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 MAML1Q92585 1016 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 TRIM43Q96BQ3 446 aaPredicted RBP4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 LOXL4Q96JB6 756 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 SGCZQ96LD1 299 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 ADOQ96SZ5 270 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 SELENOOQ9BVL4 669 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 TLR10Q9BXR5 811 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 DEF6Q9H4E7 631 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 MYH16Q9H6N6 1097 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 ARFGAP3Q9NP61 516 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 PLCB1Q9NQ66 1216 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 COL20A1Q9P218 1284 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 CNOT11Q9UKZ1 510 aaKnown RBP4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 TMX2Q9Y320 296 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 DAAM1Q9Y4D1 1078 aa4.49□□□□□ -1.69
HMGXB4-205ENST00000464480 KRTAP23-1A1A580 65 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 PLEKHD1A6NEE1 506 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 E9PLN8 166 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 K7ESM1 405 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 LEFTY2O00292 366 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 SETSIPP0DME0 302 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 TSHRP16473 764 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 KLRC1P26715 233 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 SLC11A2P49281 568 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 SCNN1GP51170 649 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 RNASE9P60153 205 aaKnown RBP4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 SATB1Q01826 763 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 TCF15Q12870 199 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 PRKD1Q15139 912 aaPredicted RBP4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 IZUMO3Q5VZ72 239 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 TSHZ3Q63HK5 1081 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 FOXR2Q6PJQ5 311 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 GDF7Q7Z4P5 450 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 LIX1LQ8IVB5 337 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 DNAJC5GQ8N7S2 189 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 FAM46DQ8NEK8 389 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 OR56A1Q8NGH5 318 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 IPCEF1Q8WWN9 437 aaPredicted RBP4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 MARS2Q96GW9 593 aaKnown RBP4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 MOGAT1Q96PD6 335 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 MED15Q96RN5 788 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 VKORC1Q9BQB6 163 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 POLR3GLQ9BT43 218 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 COLEC11Q9BWP8 271 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 BRIP1Q9BX63 1249 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 CERS4Q9HA82 394 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 SMURF2Q9HAU4 748 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 CD248Q9HCU0 757 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 A1CFQ9NQ94 594 aaKnown RBP4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 AURKAIP1Q9NWT8 199 aaPredicted RBP4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 AGAP1Q9UPQ3 857 aa4.48□□□□□ -1.69
HMGXB4-205ENST00000464480 JAG2Q9Y219 1238 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms