RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 COPS2P61201 443 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 IL1RL1Q01638 556 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 SATB1Q01826 763 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 SURF1Q15526 300 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 AMHR2Q16671 573 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 SPDYE2Q495Y8 402 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 LCA5Q86VQ0 697 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 RCOR2Q8IZ40 523 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 ARMC2Q8NEN0 867 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 LNX1Q8TBB1 728 aaPredicted RBP9.54□□□□□ -0.88
HPS4-208ENST00000464362 ALG3Q92685 438 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 ZBTB45Q96K62 511 aaPredicted RBP9.54□□□□□ -0.88
HPS4-208ENST00000464362 TMEM237Q96Q45 408 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 OLFML3Q9NRN5 406 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 METTL5Q9NRN9 209 aaKnown RBP9.54□□□□□ -0.88
HPS4-208ENST00000464362 ABCF3Q9NUQ8 709 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 PHTF1Q9UMS5 762 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 SUFUQ9UMX1 484 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 NAALADL1Q9UQQ1 740 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 DCDC2CA8MYV0 355 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 MEIS2O14770 477 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 ATP5HO75947 161 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 CTCFP49711 727 aaPredicted RBP9.54□□□□□ -0.88
HPS4-208ENST00000464362 TMEM259Q4ZIN3 620 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 PPP1R2P3Q6NXS1 205 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 MICALL2Q8IY33 904 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 PRCCQ92733 491 aaPredicted RBP9.54□□□□□ -0.88
HPS4-208ENST00000464362 ABTB1Q969K4 478 aaPredicted RBP9.54□□□□□ -0.88
HPS4-208ENST00000464362 ZDHHC15Q96MV8 337 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 GANQ9H2C0 597 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 ANGPTL2Q9UKU9 493 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 FNTAP49354 379 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 ACTR2P61160 394 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 OCRLQ01968 901 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 ATP13A4Q4VNC1 1196 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 C11orf63Q6NUN7 778 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 COL23A1Q86Y22 540 aaPredicted RBP9.54□□□□□ -0.88
HPS4-208ENST00000464362 NDUFAF2Q8N183 169 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 GRAMD1AQ96CP6 724 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 CCDC68Q9H2F9 335 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 PIH1D1Q9NWS0 290 aaKnown RBP9.54□□□□□ -0.88
HPS4-208ENST00000464362 GTSE1Q9NYZ3 720 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 PIM2Q9P1W9 311 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 ZFATQ9P243 1243 aa9.54□□□□□ -0.88
HPS4-208ENST00000464362 TRIM49D1C9J1S8 452 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 WDR46O15213 610 aaKnown RBP9.53□□□□□ -0.88
HPS4-208ENST00000464362 RIPK2O43353 540 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 PPP1R11O60927 126 aaPredicted RBP9.53□□□□□ -0.88
HPS4-208ENST00000464362 MOCS2O96007 188 aaPredicted RBP9.53□□□□□ -0.88
HPS4-208ENST00000464362 MYCP01106 439 aaPredicted RBP9.53□□□□□ -0.88
HPS4-208ENST00000464362 IL1R1P14778 569 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 SSTR1P30872 391 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 THOC5Q13769 683 aaKnown RBP9.53□□□□□ -0.88
HPS4-208ENST00000464362 ARSHQ5FYA8 562 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 IRF2BP2Q7Z5L9 587 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 PALB2Q86YC2 1186 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 RBM46Q8TBY0 533 aaKnown RBP9.53□□□□□ -0.88
HPS4-208ENST00000464362 SHISA4Q96DD7 197 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 PGBD4Q96DM1 585 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 GLIS2Q9BZE0 524 aaPredicted RBP9.53□□□□□ -0.88
HPS4-208ENST00000464362 ROPN1BQ9BZX4 212 aaPredicted RBP9.53□□□□□ -0.88
HPS4-208ENST00000464362 ROPN1Q9HAT0 212 aaPredicted RBP9.53□□□□□ -0.88
HPS4-208ENST00000464362 KCND2Q9NZV8 630 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 TSR3Q9UJK0 312 aaKnown RBP9.53□□□□□ -0.88
HPS4-208ENST00000464362 TTC4O95801 387 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 CUL2Q13617 745 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 ANKRD20A8PQ5CZ79 823 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 HGSNATQ68CP4 663 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 TWF2Q6IBS0 349 aaKnown RBP9.53□□□□□ -0.88
HPS4-208ENST00000464362 RSBN1LQ6PCB5 846 aaPredicted RBP9.53□□□□□ -0.88
HPS4-208ENST00000464362 PDZD8Q8NEN9 1154 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 GABPB2Q8TAK5 448 aaPredicted RBP9.53□□□□□ -0.88
HPS4-208ENST00000464362 ACTL9Q8TC94 416 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 CLMNQ96JQ2 1002 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 TRIM56Q9BRZ2 755 aaKnown RBP9.53□□□□□ -0.88
HPS4-208ENST00000464362 DNAJC18Q9H819 358 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.53□□□□□ -0.88
HPS4-208ENST00000464362 HEY2Q9UBP5 337 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 NR2E1Q9Y466 385 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 ASTN1O14525 1302 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 ANKRD63C9JTQ0 380 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 TXNP10599 105 aaKnown RBP9.53□□□□□ -0.88
HPS4-208ENST00000464362 NQO1P15559 274 aaKnown RBP9.53□□□□□ -0.88
HPS4-208ENST00000464362 ZNF200P98182 395 aaPredicted RBP9.53□□□□□ -0.88
HPS4-208ENST00000464362 OTUD4Q01804 1114 aaKnown RBP9.53□□□□□ -0.88
HPS4-208ENST00000464362 CACNB2Q08289 660 aaPredicted RBP9.53□□□□□ -0.88
HPS4-208ENST00000464362 CUL3Q13618 768 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 GLRA4Q5JXX5 417 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 KRT80Q6KB66 452 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 LRGUKQ96M69 825 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 YY1AP1Q9H869 796 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 IRAK4Q9NWZ3 460 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 NDE1Q9NXR1 346 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 BCAP29Q9UHQ4 241 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 CNOT7Q9UIV1 285 aaKnown RBP9.53□□□□□ -0.88
HPS4-208ENST00000464362 SMG5Q9UPR3 1016 aaKnown RBP9.53□□□□□ -0.88
HPS4-208ENST00000464362 IGSF9BQ9UPX0 1349 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 AGPSO00116 658 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 UBTFL6P0CB48 400 aaPredicted RBP9.53□□□□□ -0.88
HPS4-208ENST00000464362 TCN1P20061 433 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms