RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 SEZ6Q53EL9 994 aa18.82■□□□□ 0.6
HMGN1-210ENST00000464078 DGKKQ5KSL6 1271 aa18.82■□□□□ 0.6
HMGN1-210ENST00000464078 HYIQ5T013 277 aa18.82■□□□□ 0.6
HMGN1-210ENST00000464078 RALGPS2Q86X27 583 aaPredicted RBP18.82■□□□□ 0.6
HMGN1-210ENST00000464078 YAF2Q8IY57 180 aa18.82■□□□□ 0.6
HMGN1-210ENST00000464078 TSPAN18Q96SJ8 248 aa18.82■□□□□ 0.6
HMGN1-210ENST00000464078 MKNK1Q9BUB5 465 aa18.82■□□□□ 0.6
HMGN1-210ENST00000464078 CRISPLD1Q9H336 500 aa18.82■□□□□ 0.6
HMGN1-210ENST00000464078 HSFX1Q9UBD0 423 aa18.82■□□□□ 0.6
HMGN1-210ENST00000464078 UBQLN1Q9UMX0 589 aaKnown RBP18.82■□□□□ 0.6
HMGN1-210ENST00000464078 ASB3Q9Y575 518 aa18.82■□□□□ 0.6
HMGN1-210ENST00000464078 SLC38A8A6NNN8 435 aa18.81■□□□□ 0.6
HMGN1-210ENST00000464078 SFI1A8K8P3 1242 aa18.81■□□□□ 0.6
HMGN1-210ENST00000464078 K7ESF4 209 aa18.81■□□□□ 0.6
HMGN1-210ENST00000464078 FGF19O95750 216 aa18.81■□□□□ 0.6
HMGN1-210ENST00000464078 TYMPP19971 482 aa18.81■□□□□ 0.6
HMGN1-210ENST00000464078 CTHP32929 405 aa18.81■□□□□ 0.6
HMGN1-210ENST00000464078 SIM2Q14190 667 aaPredicted RBP18.81■□□□□ 0.6
HMGN1-210ENST00000464078 MYBPC2Q14324 1141 aa18.81■□□□□ 0.6
HMGN1-210ENST00000464078 CSRP2Q16527 193 aa18.81■□□□□ 0.6
HMGN1-210ENST00000464078 KYAT1Q16773 422 aa18.81■□□□□ 0.6
HMGN1-210ENST00000464078 WDR44Q5JSH3 913 aa18.81■□□□□ 0.6
HMGN1-210ENST00000464078 CENPPQ6IPU0 288 aa18.81■□□□□ 0.6
HMGN1-210ENST00000464078 PRR23BQ6ZRT6 265 aa18.81■□□□□ 0.6
HMGN1-210ENST00000464078 USP37Q86T82 979 aa18.81■□□□□ 0.6
HMGN1-210ENST00000464078 LONP2Q86WA8 852 aa18.81■□□□□ 0.6
HMGN1-210ENST00000464078 PSMG2Q969U7 264 aa18.81■□□□□ 0.6
HMGN1-210ENST00000464078 HAPLN2Q9GZV7 340 aa18.81■□□□□ 0.6
HMGN1-210ENST00000464078 SEMA4GQ9NTN9 838 aa18.81■□□□□ 0.6
HMGN1-210ENST00000464078 OBP2AQ9NY56 170 aa18.81■□□□□ 0.6
HMGN1-210ENST00000464078 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.81■□□□□ 0.6
HMGN1-210ENST00000464078 RALGAPA1Q6GYQ0 2036 aa18.81■□□□□ 0.6
HMGN1-210ENST00000464078 SPECC1L-ADORA2AF8WAN1 911 aa18.8■□□□□ 0.6
HMGN1-210ENST00000464078 H0YCG3 227 aa18.8■□□□□ 0.6
HMGN1-210ENST00000464078 FAM189A1O60320 539 aa18.8■□□□□ 0.6
HMGN1-210ENST00000464078 OR4Q2P0C623 313 aa18.8■□□□□ 0.6
HMGN1-210ENST00000464078 SCP2P22307 547 aa18.8■□□□□ 0.6
HMGN1-210ENST00000464078 WEE1P30291 646 aa18.8■□□□□ 0.6
HMGN1-210ENST00000464078 CDC25AP30304 524 aa18.8■□□□□ 0.6
HMGN1-210ENST00000464078 PPP2R3AQ06190 1150 aa18.8■□□□□ 0.6
HMGN1-210ENST00000464078 DUSP4Q13115 394 aa18.8■□□□□ 0.6
HMGN1-210ENST00000464078 ARHGAP29Q52LW3 1261 aa18.8■□□□□ 0.6
HMGN1-210ENST00000464078 STXBP5Q5T5C0 1151 aa18.8■□□□□ 0.6
HMGN1-210ENST00000464078 DTHD1Q6ZMT9 781 aa18.8■□□□□ 0.6
HMGN1-210ENST00000464078 PRR23CQ6ZRP0 262 aa18.8■□□□□ 0.6
HMGN1-210ENST00000464078 GAREM2Q75VX8 874 aa18.8■□□□□ 0.6
HMGN1-210ENST00000464078 ARID3BQ8IVW6 561 aaPredicted RBP18.8■□□□□ 0.6
HMGN1-210ENST00000464078 SYT2Q8N9I0 419 aaPredicted RBP18.8■□□□□ 0.6
HMGN1-210ENST00000464078 FAM184AQ8NB25 1140 aa18.8■□□□□ 0.6
HMGN1-210ENST00000464078 KIF12Q96FN5 646 aa18.8■□□□□ 0.6
HMGN1-210ENST00000464078 PGLYRP2Q96PD5 576 aa18.8■□□□□ 0.6
HMGN1-210ENST00000464078 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.8■□□□□ 0.6
HMGN1-210ENST00000464078 SH2B1Q9NRF2 756 aaPredicted RBP18.8■□□□□ 0.6
HMGN1-210ENST00000464078 TIMM13Q9Y5L4 95 aaPredicted RBP18.8■□□□□ 0.6
HMGN1-210ENST00000464078 SPAG17Q6Q759 2223 aa18.8■□□□□ 0.6
HMGN1-210ENST00000464078 MTMR11A4FU01 709 aa18.79■□□□□ 0.6
HMGN1-210ENST00000464078 CHURC1-FNTBB4DL54 471 aa18.79■□□□□ 0.6
HMGN1-210ENST00000464078 XPOTO43592 962 aaKnown RBP18.79■□□□□ 0.6
HMGN1-210ENST00000464078 HRO43593 1189 aa18.79■□□□□ 0.6
HMGN1-210ENST00000464078 ADRB2P07550 413 aa18.79■□□□□ 0.6
HMGN1-210ENST00000464078 PAX3P23760 479 aa18.79■□□□□ 0.6
HMGN1-210ENST00000464078 ALDH1A3P47895 512 aa18.79■□□□□ 0.6
HMGN1-210ENST00000464078 FNTBP49356 437 aa18.79■□□□□ 0.6
HMGN1-210ENST00000464078 KPNA1P52294 538 aaPredicted RBP18.79■□□□□ 0.6
HMGN1-210ENST00000464078 NCKAP1LP55160 1127 aa18.79■□□□□ 0.6
HMGN1-210ENST00000464078 DMWDQ09019 674 aa18.79■□□□□ 0.6
HMGN1-210ENST00000464078 RAD51AP2Q09MP3 1159 aa18.79■□□□□ 0.6
HMGN1-210ENST00000464078 CCINQ13939 588 aa18.79■□□□□ 0.6
HMGN1-210ENST00000464078 OVOS1Q6IE37 1185 aa18.79■□□□□ 0.6
HMGN1-210ENST00000464078 TXNDC11Q6PKC3 985 aa18.79■□□□□ 0.6
HMGN1-210ENST00000464078 Q6ZS52 159 aa18.79■□□□□ 0.6
HMGN1-210ENST00000464078 TMEM130Q8N3G9 435 aa18.79■□□□□ 0.6
HMGN1-210ENST00000464078 SYNPOQ8N3V7 929 aa18.79■□□□□ 0.6
HMGN1-210ENST00000464078 ZSCAN31Q96LW9 406 aaPredicted RBP18.79■□□□□ 0.6
HMGN1-210ENST00000464078 RBM12Q9NTZ6 932 aaKnown RBP18.79■□□□□ 0.6
HMGN1-210ENST00000464078 GREB1Q4ZG55 1949 aa18.78■□□□□ 0.6
HMGN1-210ENST00000464078 SOX9P48436 509 aa18.78■□□□□ 0.6
HMGN1-210ENST00000464078 SLC12A3P55017 1021 aa18.78■□□□□ 0.6
HMGN1-210ENST00000464078 PLCB2Q00722 1185 aa18.78■□□□□ 0.6
HMGN1-210ENST00000464078 SPAG1Q07617 926 aa18.78■□□□□ 0.6
HMGN1-210ENST00000464078 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.78■□□□□ 0.6
HMGN1-210ENST00000464078 ITIH5Q86UX2 942 aa18.78■□□□□ 0.6
HMGN1-210ENST00000464078 LRRC3BQ96PB8 259 aa18.78■□□□□ 0.6
HMGN1-210ENST00000464078 PNMA5Q96PV4 448 aa18.78■□□□□ 0.6
HMGN1-210ENST00000464078 LARSQ9P2J5 1176 aaKnown RBP18.78■□□□□ 0.6
HMGN1-210ENST00000464078 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.77■□□□□ 0.6
HMGN1-210ENST00000464078 HNRNPDLO14979 420 aaKnown RBP18.77■□□□□ 0.6
HMGN1-210ENST00000464078 KRT37O76014 449 aa18.77■□□□□ 0.6
HMGN1-210ENST00000464078 PIGRP01833 764 aa18.77■□□□□ 0.6
HMGN1-210ENST00000464078 ODC1P11926 461 aa18.77■□□□□ 0.6
HMGN1-210ENST00000464078 TNFSF9P41273 254 aa18.77■□□□□ 0.6
HMGN1-210ENST00000464078 ATP2C1P98194 919 aaPredicted RBP18.77■□□□□ 0.6
HMGN1-210ENST00000464078 ENOX2Q16206 610 aaKnown RBP18.77■□□□□ 0.6
HMGN1-210ENST00000464078 PPM1JQ5JR12 505 aa18.77■□□□□ 0.6
HMGN1-210ENST00000464078 SPATA1Q5VX52 437 aa18.77■□□□□ 0.6
HMGN1-210ENST00000464078 DSTYKQ6XUX3 929 aa18.77■□□□□ 0.6
HMGN1-210ENST00000464078 HAUS6Q7Z4H7 955 aa18.77■□□□□ 0.6
HMGN1-210ENST00000464078 DNAJB7Q7Z6W7 309 aaPredicted RBP18.77■□□□□ 0.6
HMGN1-210ENST00000464078 TTC9BQ8N6N2 239 aa18.77■□□□□ 0.6
HMGN1-210ENST00000464078 ATAD1Q8NBU5 361 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms