RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 MUTYHQ9UIF7 546 aa20.32■□□□□ 0.84
COL9A3-203ENST00000462700 SIX4Q9UIU6 781 aa20.32■□□□□ 0.84
COL9A3-203ENST00000462700 DSEQ9UL01 958 aa20.32■□□□□ 0.84
COL9A3-203ENST00000462700 DENND4AQ7Z401 1863 aa20.32■□□□□ 0.84
COL9A3-203ENST00000462700 BDP1A6H8Y1 2624 aa20.32■□□□□ 0.84
COL9A3-203ENST00000462700 CCL16O15467 120 aa20.31■□□□□ 0.84
COL9A3-203ENST00000462700 GADD45BO75293 160 aaPredicted RBP20.31■□□□□ 0.84
COL9A3-203ENST00000462700 KRT19P08727 400 aa20.31■□□□□ 0.84
COL9A3-203ENST00000462700 DLATP10515 647 aaKnown RBP20.31■□□□□ 0.84
COL9A3-203ENST00000462700 ALADP13716 330 aa20.31■□□□□ 0.84
COL9A3-203ENST00000462700 ELF1P32519 619 aa20.31■□□□□ 0.84
COL9A3-203ENST00000462700 RBP5P82980 135 aa20.31■□□□□ 0.84
COL9A3-203ENST00000462700 DUOXA2Q1HG44 320 aa20.31■□□□□ 0.84
COL9A3-203ENST00000462700 GUF1Q8N442 669 aaKnown RBP20.31■□□□□ 0.84
COL9A3-203ENST00000462700 CCDC127Q96BQ5 260 aa20.31■□□□□ 0.84
COL9A3-203ENST00000462700 MFSD14AQ96MC6 490 aa20.31■□□□□ 0.84
COL9A3-203ENST00000462700 FNBP1Q96RU3 617 aa20.31■□□□□ 0.84
COL9A3-203ENST00000462700 CGRRF1Q99675 332 aa20.31■□□□□ 0.84
COL9A3-203ENST00000462700 AFF4Q9UHB7 1163 aaKnown RBP20.31■□□□□ 0.84
COL9A3-203ENST00000462700 MAPK8IP1Q9UQF2 711 aa20.31■□□□□ 0.84
COL9A3-203ENST00000462700 TSC2P49815 1807 aa20.3■□□□□ 0.84
COL9A3-203ENST00000462700 MTCL1Q9Y4B5 1905 aaKnown RBP20.3■□□□□ 0.84
COL9A3-203ENST00000462700 CALUO43852 315 aaPredicted RBP20.3■□□□□ 0.84
COL9A3-203ENST00000462700 XYLBO75191 536 aa20.3■□□□□ 0.84
COL9A3-203ENST00000462700 PRPF40AO75400 957 aaKnown RBP20.3■□□□□ 0.84
COL9A3-203ENST00000462700 NR3C1P04150 777 aa20.3■□□□□ 0.84
COL9A3-203ENST00000462700 OR4Q2P0C623 313 aa20.3■□□□□ 0.84
COL9A3-203ENST00000462700 MYBPC2Q14324 1141 aa20.3■□□□□ 0.84
COL9A3-203ENST00000462700 RNF19BQ6ZMZ0 732 aa20.3■□□□□ 0.84
COL9A3-203ENST00000462700 OTOP3Q7RTS5 596 aa20.3■□□□□ 0.84
COL9A3-203ENST00000462700 GRASPQ7Z6J2 395 aaPredicted RBP20.3■□□□□ 0.84
COL9A3-203ENST00000462700 METTL23Q86XA0 190 aa20.3■□□□□ 0.84
COL9A3-203ENST00000462700 TCEAL8Q8IYN2 117 aa20.3■□□□□ 0.84
COL9A3-203ENST00000462700 ZDHHC14Q8IZN3 488 aa20.3■□□□□ 0.84
COL9A3-203ENST00000462700 ACSF2Q96CM8 615 aaPredicted RBP20.3■□□□□ 0.84
COL9A3-203ENST00000462700 GZF1Q9H116 711 aaPredicted RBP20.3■□□□□ 0.84
COL9A3-203ENST00000462700 CYP4F11Q9HBI6 524 aa20.3■□□□□ 0.84
COL9A3-203ENST00000462700 RMND1Q9NWS8 449 aa20.3■□□□□ 0.84
COL9A3-203ENST00000462700 MAFFQ9ULX9 164 aa20.3■□□□□ 0.84
COL9A3-203ENST00000462700 TRAF3IP3Q9Y228 551 aa20.3■□□□□ 0.84
COL9A3-203ENST00000462700 C2orf16Q68DN1 1984 aa20.3■□□□□ 0.84
COL9A3-203ENST00000462700 PRRG1O14668 218 aa20.29■□□□□ 0.84
COL9A3-203ENST00000462700 SEC24AO95486 1093 aa20.29■□□□□ 0.84
COL9A3-203ENST00000462700 TNNI1P19237 187 aa20.29■□□□□ 0.84
COL9A3-203ENST00000462700 ADCY1Q08828 1119 aa20.29■□□□□ 0.84
COL9A3-203ENST00000462700 BFSP1Q12934 665 aa20.29■□□□□ 0.84
COL9A3-203ENST00000462700 GPR17Q13304 367 aa20.29■□□□□ 0.84
COL9A3-203ENST00000462700 WSCD1Q658N2 575 aa20.29■□□□□ 0.84
COL9A3-203ENST00000462700 TRAPPC11Q7Z392 1133 aa20.29■□□□□ 0.84
COL9A3-203ENST00000462700 PLCD3Q8N3E9 789 aa20.29■□□□□ 0.84
COL9A3-203ENST00000462700 OR10T2Q8NGX3 314 aa20.29■□□□□ 0.84
COL9A3-203ENST00000462700 SPATA20Q8TB22 786 aa20.29■□□□□ 0.84
COL9A3-203ENST00000462700 GSDMAQ96QA5 445 aa20.29■□□□□ 0.84
COL9A3-203ENST00000462700 TMEM209Q96SK2 561 aa20.29■□□□□ 0.84
COL9A3-203ENST00000462700 RTP3Q9BQQ7 232 aa20.29■□□□□ 0.84
COL9A3-203ENST00000462700 HOOK1Q9UJC3 728 aaKnown RBP20.29■□□□□ 0.84
COL9A3-203ENST00000462700 POLIQ9UNA4 740 aa20.29■□□□□ 0.84
COL9A3-203ENST00000462700 INSL5Q9Y5Q6 135 aa20.29■□□□□ 0.84
COL9A3-203ENST00000462700 N4BP1O75113 896 aaKnown RBP20.28■□□□□ 0.84
COL9A3-203ENST00000462700 SMC2O95347 1197 aa20.28■□□□□ 0.84
COL9A3-203ENST00000462700 LRG1P02750 347 aa20.28■□□□□ 0.84
COL9A3-203ENST00000462700 NFIL3Q16649 462 aa20.28■□□□□ 0.84
COL9A3-203ENST00000462700 ELOA2Q8IYF1 753 aaPredicted RBP20.28■□□□□ 0.84
COL9A3-203ENST00000462700 SMYD4Q8IYR2 804 aaPredicted RBP20.28■□□□□ 0.84
COL9A3-203ENST00000462700 PLEKHO2Q8TD55 490 aa20.28■□□□□ 0.84
COL9A3-203ENST00000462700 ERCC4Q92889 916 aaPredicted RBP20.28■□□□□ 0.84
COL9A3-203ENST00000462700 SMARCE1Q969G3 411 aa20.28■□□□□ 0.84
COL9A3-203ENST00000462700 C1QTNF1Q9BXJ1 281 aa20.28■□□□□ 0.84
COL9A3-203ENST00000462700 GDAP2Q9NXN4 497 aa20.28■□□□□ 0.84
COL9A3-203ENST00000462700 L1RE1Q9UN81 338 aa20.28■□□□□ 0.84
COL9A3-203ENST00000462700 R3HCC1Q9Y3T6 440 aaKnown RBP20.28■□□□□ 0.84
COL9A3-203ENST00000462700 PCDHA5Q9Y5H7 936 aa20.28■□□□□ 0.84
COL9A3-203ENST00000462700 SCN1AP35498 2009 aa20.27■□□□□ 0.84
COL9A3-203ENST00000462700 KINO60870 393 aaKnown RBP20.27■□□□□ 0.84
COL9A3-203ENST00000462700 VNN2O95498 520 aa20.27■□□□□ 0.84
COL9A3-203ENST00000462700 CASP4P49662 377 aa20.27■□□□□ 0.84
COL9A3-203ENST00000462700 NTHL1P78549 312 aa20.27■□□□□ 0.84
COL9A3-203ENST00000462700 MYO1EQ12965 1108 aa20.27■□□□□ 0.84
COL9A3-203ENST00000462700 ZNF658Q5TYW1 1059 aaPredicted RBP20.27■□□□□ 0.84
COL9A3-203ENST00000462700 GET4Q7L5D6 327 aaPredicted RBP20.27■□□□□ 0.84
COL9A3-203ENST00000462700 THEM5Q8N1Q8 247 aa20.27■□□□□ 0.84
COL9A3-203ENST00000462700 PDCL2Q8N4E4 241 aa20.27■□□□□ 0.84
COL9A3-203ENST00000462700 PARD3BQ8TEW8 1205 aa20.27■□□□□ 0.84
COL9A3-203ENST00000462700 ZNF516Q92618 1163 aa20.27■□□□□ 0.84
COL9A3-203ENST00000462700 PGLYRP2Q96PD5 576 aa20.27■□□□□ 0.84
COL9A3-203ENST00000462700 HCFC1R1Q9NWW0 138 aa20.27■□□□□ 0.84
COL9A3-203ENST00000462700 SNX9Q9Y5X1 595 aa20.27■□□□□ 0.84
COL9A3-203ENST00000462700 MTMR11A4FU01 709 aa20.26■□□□□ 0.83
COL9A3-203ENST00000462700 HUS1O60921 280 aa20.26■□□□□ 0.83
COL9A3-203ENST00000462700 FSHRP23945 695 aa20.26■□□□□ 0.83
COL9A3-203ENST00000462700 NR2F2P24468 414 aa20.26■□□□□ 0.83
COL9A3-203ENST00000462700 GBP2P32456 591 aaPredicted RBP20.26■□□□□ 0.83
COL9A3-203ENST00000462700 PTPN21Q16825 1174 aa20.26■□□□□ 0.83
COL9A3-203ENST00000462700 ZCWPW2Q504Y3 356 aa20.26■□□□□ 0.83
COL9A3-203ENST00000462700 CEP135Q66GS9 1140 aa20.26■□□□□ 0.83
COL9A3-203ENST00000462700 HPDLQ96IR7 371 aa20.26■□□□□ 0.83
COL9A3-203ENST00000462700 MYADMQ96S97 322 aa20.26■□□□□ 0.83
COL9A3-203ENST00000462700 ZCWPW1Q9H0M4 648 aa20.26■□□□□ 0.83
COL9A3-203ENST00000462700 DNMT3BQ9UBC3 853 aaKnown RBP20.26■□□□□ 0.83
COL9A3-203ENST00000462700 LIMD1Q9UGP4 676 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms