RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 IP6K2Q9UHH9 426 aa3.72□□□□□ -1.81
COL8A1-204ENST00000462604 KCNG1Q9UIX4 513 aa3.72□□□□□ -1.81
COL8A1-204ENST00000462604 ZFP69BQ9UJL9 534 aa3.72□□□□□ -1.81
COL8A1-204ENST00000462604 TRIM33Q9UPN9 1127 aa3.72□□□□□ -1.81
COL8A1-204ENST00000462604 ZNF148Q9UQR1 794 aa3.72□□□□□ -1.81
COL8A1-204ENST00000462604 NEU2Q9Y3R4 380 aa3.72□□□□□ -1.81
COL8A1-204ENST00000462604 CTDP1Q9Y5B0 961 aaPredicted RBP3.72□□□□□ -1.81
COL8A1-204ENST00000462604 UBIAD1Q9Y5Z9 338 aa3.72□□□□□ -1.81
COL8A1-204ENST00000462604 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.72□□□□□ -1.81
COL8A1-204ENST00000462604 ZHX2Q9Y6X8 837 aa3.72□□□□□ -1.81
COL8A1-204ENST00000462604 MYH2Q9UKX2 1941 aa3.72□□□□□ -1.81
COL8A1-204ENST00000462604 NFASCO94856 1347 aa3.71□□□□□ -1.81
COL8A1-204ENST00000462604 UMODL1Q5DID0 1318 aa3.71□□□□□ -1.81
COL8A1-204ENST00000462604 MYPNQ86TC9 1320 aa3.71□□□□□ -1.81
COL8A1-204ENST00000462604 LRRD1A4D1F6 860 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 SPDYE2BA6NHP3 402 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 SPDYE5A6NIY4 337 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 FOXO6A8MYZ6 492 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 POC1B-GALNT4F8VUJ3 575 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 PI4K2BG5E9Z4 385 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 SGK1O00141 431 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 SMAPO00193 183 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 C2CD2LO14523 706 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 TRAFD1O14545 582 aaPredicted RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 ALOX15BO15296 676 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 TM9SF1O15321 606 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 NVLO15381 856 aaKnown RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 TLR3O15455 904 aaKnown RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 EXTL3O43909 919 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 GRIN3BO60391 1043 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 ZBED4O75132 1171 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 PEX11AO75192 247 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 STAM2O75886 525 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 HLA-DRAP01903 254 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 MT-ND3P03897 115 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 CYP1A1P04798 512 aaPredicted RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 SPDYE6P0CI01 402 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 FDX1P10109 184 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 SKIP12755 728 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 UNGP13051 313 aaPredicted RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 PECAM1P16284 738 aaPredicted RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 ATF7P17544 494 aaPredicted RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 ITGB5P18084 799 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 GNAZP19086 355 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 CD58P19256 250 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 EIF2AK2P19525 551 aaKnown RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 ATP6V1C1P21283 382 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 PTPN4P29074 926 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 EPHB2P29323 1055 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 CNGA1P29973 690 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 CCND2P30279 289 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 ADSSP30520 456 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 GNA15P30679 374 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 VHLP40337 213 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 LIG4P49917 911 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 ARSEP51690 589 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 VCPP55072 806 aaKnown RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 WDR4P57081 412 aaKnown RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 GEMIN4P57678 1058 aaKnown RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 RTP1P59025 263 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 TAS2R40P59535 323 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 NOMO3P69849 1222 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 JAG1P78504 1218 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 MXRA7P84157 204 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 ZBTB16Q05516 673 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 ADCY1Q08828 1119 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 MGAT5Q09328 741 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 GRIK3Q13003 919 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 PDIA2Q13087 525 aaKnown RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 GPS1Q13098 491 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 MAMLD1Q13495 774 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 CUL2Q13617 745 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 MOGSQ13724 837 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 LBRQ14739 615 aaKnown RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 LLGL1Q15334 1064 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 ZYXQ15942 572 aaKnown RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 HIF1AQ16665 826 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 UGCGQ16739 394 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 SPDYE2Q495Y8 402 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 TBC1D10BQ4KMP7 808 aaPredicted RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 TAF1BQ53T94 588 aaPredicted RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 BRDTQ58F21 947 aaPredicted RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 EFHC2Q5JST6 749 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 FAM182BQ5T319 152 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 RNASEH2BQ5TBB1 312 aaKnown RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 KAZNQ674X7 775 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 PLA2G4FQ68DD2 849 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 CDCA2Q69YH5 1023 aaPredicted RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 TRIM68Q6AZZ1 485 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 PLEKHA7Q6IQ23 1121 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 CHADLQ6NUI6 762 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 IRGCQ6NXR0 463 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 XRRA1Q6P2D8 792 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 CCDC62Q6P9F0 684 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 SPOCD1Q6ZMY3 1216 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 SEPT14Q6ZU15 432 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 SV2AQ7L0J3 742 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 NLRP9Q7RTR0 991 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 APBB1IPQ7Z5R6 666 aaPredicted RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 ANKS1BQ7Z6G8 1248 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms