RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 METTL23Q86XA0 190 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 TMTC1Q8IUR5 882 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 ARHGEF19Q8IW93 802 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 GPR65Q8IYL9 337 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 FIBCD1Q8N539 461 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 TC2NQ8N9U0 490 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 SP7Q8TDD2 431 aaPredicted RBP11.42□□□□□ -0.58
RTF1-202ENST00000462276 FAM84AQ96KN4 292 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 SENP8Q96LD8 212 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 KREMEN1Q96MU8 473 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 ZNF558Q96NG5 402 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 GDF15Q99988 308 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 GOLGA2P5Q9HBQ8 144 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 CISHQ9NSE2 258 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 ABHD10Q9NUJ1 306 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 CXXC1Q9P0U4 656 aaPredicted RBP11.42□□□□□ -0.58
RTF1-202ENST00000462276 TET1Q8NFU7 2136 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 TANC1Q9C0D5 1861 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 SF3B1O75533 1304 aaKnown RBP eCLIP11.41□□□□□ -0.58
RTF1-202ENST00000462276 SSU72P8A0A1W2PR75 194 aa11.41□□□□□ -0.58
RTF1-202ENST00000462276 LRRC53A6NM62 1247 aa11.41□□□□□ -0.58
RTF1-202ENST00000462276 SPTLC1O15269 473 aa11.41□□□□□ -0.58
RTF1-202ENST00000462276 TLL1O43897 1013 aa11.41□□□□□ -0.58
RTF1-202ENST00000462276 LRRN2O75325 713 aa11.41□□□□□ -0.58
RTF1-202ENST00000462276 KIF4AO95239 1232 aa11.41□□□□□ -0.58
RTF1-202ENST00000462276 SERPING1P05155 500 aa11.41□□□□□ -0.58
RTF1-202ENST00000462276 WEE2P0C1S8 567 aa11.41□□□□□ -0.58
RTF1-202ENST00000462276 ACO1P21399 889 aaKnown RBP11.41□□□□□ -0.58
RTF1-202ENST00000462276 WARSP23381 471 aaKnown RBP11.41□□□□□ -0.58
RTF1-202ENST00000462276 PCSK1P29120 753 aa11.41□□□□□ -0.58
RTF1-202ENST00000462276 ADKP55263 362 aaKnown RBP11.41□□□□□ -0.58
RTF1-202ENST00000462276 BCAR1P56945 870 aa11.41□□□□□ -0.58
RTF1-202ENST00000462276 ASIC2Q16515 512 aa11.41□□□□□ -0.58
RTF1-202ENST00000462276 PTPN21Q16825 1174 aa11.41□□□□□ -0.58
RTF1-202ENST00000462276 ARHGAP44Q17R89 818 aa11.41□□□□□ -0.58
RTF1-202ENST00000462276 SOWAHAQ2M3V2 549 aa11.41□□□□□ -0.58
RTF1-202ENST00000462276 GJB7Q6PEY0 223 aa11.41□□□□□ -0.58
RTF1-202ENST00000462276 KCNT2Q6UVM3 1135 aa11.41□□□□□ -0.58
RTF1-202ENST00000462276 VPS36Q86VN1 386 aa11.41□□□□□ -0.58
RTF1-202ENST00000462276 ZNF677Q86XU0 584 aa11.41□□□□□ -0.58
RTF1-202ENST00000462276 UBR7Q8N806 425 aa11.41□□□□□ -0.58
RTF1-202ENST00000462276 CLP1Q92989 425 aaKnown RBP11.41□□□□□ -0.58
RTF1-202ENST00000462276 RNPC3Q96LT9 517 aaKnown RBP11.41□□□□□ -0.58
RTF1-202ENST00000462276 PLVAPQ9BX97 442 aa11.41□□□□□ -0.58
RTF1-202ENST00000462276 UBE2OQ9C0C9 1292 aaKnown RBP11.41□□□□□ -0.58
RTF1-202ENST00000462276 SNX25Q9H3E2 840 aa11.41□□□□□ -0.58
RTF1-202ENST00000462276 CWH43Q9H720 699 aa11.41□□□□□ -0.58
RTF1-202ENST00000462276 ADAM28Q9UKQ2 775 aa11.41□□□□□ -0.58
RTF1-202ENST00000462276 PCDHB8Q9UN66 801 aa11.41□□□□□ -0.58
RTF1-202ENST00000462276 PCDHB4Q9Y5E5 795 aa11.41□□□□□ -0.58
RTF1-202ENST00000462276 PCDHB12Q9Y5F1 795 aa11.41□□□□□ -0.58
RTF1-202ENST00000462276 RNF225M0QZC1 329 aaPredicted RBP11.4□□□□□ -0.58
RTF1-202ENST00000462276 GABRDO14764 452 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 PPEF2O14830 753 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 CILPO75339 1184 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 OAZ2O95190 189 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 KRT5P13647 590 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 GNL1P36915 607 aaPredicted RBP11.4□□□□□ -0.58
RTF1-202ENST00000462276 SLC11A1P49279 550 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 GATMP50440 423 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 ZNF132P52740 706 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 APBA1Q02410 837 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 KRT17Q04695 432 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 KLHL30Q0D2K2 578 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 STILQ15468 1287 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 PAN2Q504Q3 1202 aaKnown RBP11.4□□□□□ -0.58
RTF1-202ENST00000462276 TIGD5Q53EQ6 642 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 SPOUT1Q5T280 376 aaKnown RBP11.4□□□□□ -0.58
RTF1-202ENST00000462276 TMEM270Q6UE05 265 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 CD300LGQ6UXG3 332 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 CYP26C1Q6V0L0 522 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.4□□□□□ -0.58
RTF1-202ENST00000462276 IRF2BP2Q7Z5L9 587 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 LRRC8AQ8IWT6 810 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 CCDC170Q8IYT3 715 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 ADGRF2Q8IZF7 708 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 CRYBG2Q8N1P7 616 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 THEM5Q8N1Q8 247 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 PDCL2Q8N4E4 241 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 TNIP3Q96KP6 325 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 SAMD11Q96NU1 681 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 BAG1Q99933 345 aaPredicted RBP11.4□□□□□ -0.58
RTF1-202ENST00000462276 PAAF1Q9BRP4 392 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 NT5C1AQ9BXI3 368 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 GPR88Q9GZN0 384 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 SPG21Q9NZD8 308 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 DNAJB4Q9UDY4 337 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 POLIQ9UNA4 740 aa11.4□□□□□ -0.58
RTF1-202ENST00000462276 SZT2Q5T011 3432 aa11.39□□□□□ -0.59
RTF1-202ENST00000462276 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.39□□□□□ -0.59
RTF1-202ENST00000462276 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.39□□□□□ -0.59
RTF1-202ENST00000462276 H0YGN5 161 aa11.39□□□□□ -0.59
RTF1-202ENST00000462276 MED7O43513 233 aa11.39□□□□□ -0.59
RTF1-202ENST00000462276 RB1P06400 928 aa11.39□□□□□ -0.59
RTF1-202ENST00000462276 USP8P40818 1118 aa11.39□□□□□ -0.59
RTF1-202ENST00000462276 BMS1Q14692 1282 aaKnown RBP11.39□□□□□ -0.59
RTF1-202ENST00000462276 SHHQ15465 462 aa11.39□□□□□ -0.59
RTF1-202ENST00000462276 MAPRE1Q15691 268 aaKnown RBP11.39□□□□□ -0.59
RTF1-202ENST00000462276 SCARA3Q6AZY7 606 aa11.39□□□□□ -0.59
RTF1-202ENST00000462276 PPP1R2P3Q6NXS1 205 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms