RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 VRTNQ9H8Y1 702 aa12.54□□□□□ -0.4
TRAF3IP1-204ENST00000462122 DPP7Q9UHL4 492 aa12.54□□□□□ -0.4
TRAF3IP1-204ENST00000462122 HCFC2Q9Y5Z7 792 aa12.54□□□□□ -0.4
TRAF3IP1-204ENST00000462122 ATG2AQ2TAZ0 1938 aa12.54□□□□□ -0.4
TRAF3IP1-204ENST00000462122 HUS1O60921 280 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 PIK3CAP42336 1068 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 GCLMP48507 274 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 CLCN4P51793 760 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 MYL6P60660 151 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 TYRO3Q06418 890 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 PPP3CAQ08209 521 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 ADAM15Q13444 863 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 SGSM1Q2NKQ1 1148 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 ZNF699Q32M78 642 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 CTXN3Q4LDR2 81 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 OVOS1Q6IE37 1185 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 SLC8B1Q6J4K2 584 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 ELMSAN1Q6PJG2 1045 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 TMEM184AQ6ZMB5 413 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 METTL23Q86XA0 190 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 FAM114A1Q8IWE2 563 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 TMEM86AQ8N2M4 240 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 CCDC150Q8NCX0 1101 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 CASP10Q92851 521 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 HLA-CQ95604 372 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 SLC35C1Q96A29 364 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 MED15Q96RN5 788 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 CLSTN3Q9BQT9 956 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 IMPG2Q9BZV3 1241 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 CLDND1Q9NY35 253 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 TIMM13Q9Y5L4 95 aaPredicted RBP12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 SNX9Q9Y5X1 595 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 CDY1Q9Y6F8 540 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 MYO7AQ13402 2215 aa12.53□□□□□ -0.4
TRAF3IP1-204ENST00000462122 OR6C75A6NL08 312 aa12.52□□□□□ -0.41
TRAF3IP1-204ENST00000462122 TBC1D4O60343 1298 aa12.52□□□□□ -0.41
TRAF3IP1-204ENST00000462122 N4BP1O75113 896 aaKnown RBP12.52□□□□□ -0.41
TRAF3IP1-204ENST00000462122 VNN1O95497 513 aa12.52□□□□□ -0.41
TRAF3IP1-204ENST00000462122 GLP2RO95838 553 aa12.52□□□□□ -0.41
TRAF3IP1-204ENST00000462122 GLUD1P00367 558 aa12.52□□□□□ -0.41
TRAF3IP1-204ENST00000462122 P4HA1P13674 534 aa12.52□□□□□ -0.41
TRAF3IP1-204ENST00000462122 RPL17P18621 184 aaKnown RBP12.52□□□□□ -0.41
TRAF3IP1-204ENST00000462122 GTF2F1P35269 517 aaKnown RBP eCLIP12.52□□□□□ -0.41
TRAF3IP1-204ENST00000462122 TNNC1P63316 161 aa12.52□□□□□ -0.41
TRAF3IP1-204ENST00000462122 KCNC3Q14003 757 aa12.52□□□□□ -0.41
TRAF3IP1-204ENST00000462122 RAB33AQ14088 237 aa12.52□□□□□ -0.41
TRAF3IP1-204ENST00000462122 NFKBIBQ15653 356 aa12.52□□□□□ -0.41
TRAF3IP1-204ENST00000462122 WDR72Q3MJ13 1102 aa12.52□□□□□ -0.41
TRAF3IP1-204ENST00000462122 TRIM59Q8IWR1 403 aa12.52□□□□□ -0.41
TRAF3IP1-204ENST00000462122 THEM5Q8N1Q8 247 aa12.52□□□□□ -0.41
TRAF3IP1-204ENST00000462122 ENOX1Q8TC92 643 aaKnown RBP12.52□□□□□ -0.41
TRAF3IP1-204ENST00000462122 HDAC7Q8WUI4 952 aa12.52□□□□□ -0.41
TRAF3IP1-204ENST00000462122 CNOT6LQ96LI5 555 aaKnown RBP12.52□□□□□ -0.41
TRAF3IP1-204ENST00000462122 NAT10Q9H0A0 1025 aaKnown RBP12.52□□□□□ -0.41
TRAF3IP1-204ENST00000462122 XYLT2Q9H1B5 865 aa12.52□□□□□ -0.41
TRAF3IP1-204ENST00000462122 THAP9Q9H5L6 903 aa12.52□□□□□ -0.41
TRAF3IP1-204ENST00000462122 UBE2ZQ9H832 354 aaPredicted RBP12.52□□□□□ -0.41
TRAF3IP1-204ENST00000462122 MMRN2Q9H8L6 949 aa12.52□□□□□ -0.41
TRAF3IP1-204ENST00000462122 DZANK1Q9NVP4 752 aa12.52□□□□□ -0.41
TRAF3IP1-204ENST00000462122 FBXL5Q9UKA1 691 aa12.52□□□□□ -0.41
TRAF3IP1-204ENST00000462122 VWA8A3KMH1 1905 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 PMM2O15305 246 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 P4HA2O15460 535 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 LINC01565O15544 149 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 TGM5O43548 720 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 TACC1O75410 805 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 CLSTN1O94985 981 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 ASS1P00966 412 aaKnown RBP12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 HLA-DRAP01903 254 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 FAM163BP0C2L3 166 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 OR1D2P34982 312 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 LHX1P48742 406 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 CETN1Q12798 172 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 ZNF667Q5HYK9 610 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 WSCD1Q658N2 575 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 TPGS2Q68CL5 300 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 SCARA3Q6AZY7 606 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 LLGL2Q6P1M3 1020 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 EP400NLQ6ZTU2 488 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 C11orf57Q6ZUT1 292 aaPredicted RBP12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 LIMS2Q7Z4I7 341 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 GLYCTKQ8IVS8 523 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 ADGRF2Q8IZF7 708 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 PDCL2Q8N4E4 241 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 FBXL13Q8NEE6 735 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 VN1R2Q8NFZ6 395 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 TAS1R2Q8TE23 839 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 SLC22A17Q8WUG5 538 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 MMS19Q96T76 1030 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 PLEKHA4Q9H4M7 779 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 THEGQ9P2T0 379 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 MAGEC2Q9UBF1 373 aaPredicted RBP12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 L1RE1Q9UN81 338 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 COQ4Q9Y3A0 265 aa12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.51□□□□□ -0.41
TRAF3IP1-204ENST00000462122 SCN1AP35498 2009 aa12.5□□□□□ -0.41
TRAF3IP1-204ENST00000462122 SYCE3A1L190 88 aa12.5□□□□□ -0.41
TRAF3IP1-204ENST00000462122 ADAM12O43184 909 aa12.5□□□□□ -0.41
TRAF3IP1-204ENST00000462122 TBX10O75333 385 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms