RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 ANKRD20A8PQ5CZ79 823 aa13.26□□□□□ -0.29
COL4A6-204ENST00000461897 MARCH8Q5T0T0 291 aa13.26□□□□□ -0.29
COL4A6-204ENST00000461897 RNF187Q5TA31 235 aaPredicted RBP13.26□□□□□ -0.29
COL4A6-204ENST00000461897 GKAP1Q5VSY0 366 aaPredicted RBP13.26□□□□□ -0.29
COL4A6-204ENST00000461897 FBXO25Q8TCJ0 367 aa13.26□□□□□ -0.29
COL4A6-204ENST00000461897 CHMP6Q96FZ7 201 aa13.26□□□□□ -0.29
COL4A6-204ENST00000461897 ZNF317Q96PQ6 595 aaPredicted RBP13.26□□□□□ -0.29
COL4A6-204ENST00000461897 ACO2Q99798 780 aaKnown RBP13.26□□□□□ -0.29
COL4A6-204ENST00000461897 ARHGAP39Q9C0H5 1083 aa13.26□□□□□ -0.29
COL4A6-204ENST00000461897 KDM4CQ9H3R0 1056 aa13.26□□□□□ -0.29
COL4A6-204ENST00000461897 MINDY3Q9H8M7 445 aa13.26□□□□□ -0.29
COL4A6-204ENST00000461897 LRRC4CQ9HCJ2 640 aa13.26□□□□□ -0.29
COL4A6-204ENST00000461897 BCCIPQ9P287 314 aaKnown RBP eCLIP13.26□□□□□ -0.29
COL4A6-204ENST00000461897 PTPRJQ12913 1337 aa13.26□□□□□ -0.29
COL4A6-204ENST00000461897 KAT6AQ92794 2004 aa13.26□□□□□ -0.29
COL4A6-204ENST00000461897 GOLGA6L7A0A1B0GV03 622 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 MAGEB2O15479 319 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 ASAP2O43150 1006 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 TOM1L1O75674 476 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 F2P00734 622 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 AGTP01019 485 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 GTF2H1P32780 548 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 MBTD1Q05BQ5 628 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 ADCY2Q08462 1091 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 PRPF4BQ13523 1007 aaKnown RBP13.25□□□□□ -0.29
COL4A6-204ENST00000461897 GRIK4Q16099 956 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 ARHGAP44Q17R89 818 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 ZNF568Q3ZCX4 644 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 C6orf118Q5T5N4 469 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 DENND2CQ68D51 928 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 MTHFD1LQ6UB35 978 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 C15orf39Q6ZRI6 1047 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 PAXIP1Q6ZW49 1069 aaPredicted RBP13.25□□□□□ -0.29
COL4A6-204ENST00000461897 SV2AQ7L0J3 742 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 USP37Q86T82 979 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 FAM71AQ8IYT1 594 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 TAS1R2Q8TE23 839 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 SLC20A1Q8WUM9 679 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 ATXN2LQ8WWM7 1075 aaKnown RBP13.25□□□□□ -0.29
COL4A6-204ENST00000461897 ZNF516Q92618 1163 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 SLCO2A1Q92959 643 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 NFKBIZQ9BYH8 718 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 ADAM7Q9H2U9 754 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 FZD8Q9H461 694 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 IFT122Q9HBG6 1241 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 RBAKQ9NYW8 714 aaPredicted RBP13.25□□□□□ -0.29
COL4A6-204ENST00000461897 CTTNBP2NLQ9P2B4 639 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 NOCTQ9UK39 431 aaKnown RBP13.25□□□□□ -0.29
COL4A6-204ENST00000461897 CLDN3O15551 220 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 B4GALT5O43286 388 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 SHBGP04278 402 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 CYP1A2P05177 515 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 IQCF3P0C7M6 154 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 HARSP12081 509 aaKnown RBP13.25□□□□□ -0.29
COL4A6-204ENST00000461897 CHRNB2P17787 502 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 RPL21P46778 160 aaKnown RBP13.25□□□□□ -0.29
COL4A6-204ENST00000461897 ZNF211Q13398 564 aaPredicted RBP13.25□□□□□ -0.29
COL4A6-204ENST00000461897 SLMAPQ14BN4 828 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 SEZ6Q53EL9 994 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 LMBRD2Q68DH5 695 aaPredicted RBP13.25□□□□□ -0.29
COL4A6-204ENST00000461897 MFSD5Q6N075 450 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 ZDHHC14Q8IZN3 488 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 CCT6BQ92526 530 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 KRT35Q92764 455 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 TRIM31Q9BZY9 425 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 UBE2TQ9NPD8 197 aaPredicted RBP13.25□□□□□ -0.29
COL4A6-204ENST00000461897 MTRF1LQ9UGC7 380 aaKnown RBP13.25□□□□□ -0.29
COL4A6-204ENST00000461897 SNX24Q9Y343 169 aa13.25□□□□□ -0.29
COL4A6-204ENST00000461897 BRCA2P51587 3418 aa13.24□□□□□ -0.29
COL4A6-204ENST00000461897 INO80B-WBP1J3KQ70 363 aa13.24□□□□□ -0.29
COL4A6-204ENST00000461897 ACKR2O00590 384 aa13.24□□□□□ -0.29
COL4A6-204ENST00000461897 LDHAP00338 332 aaKnown RBP13.24□□□□□ -0.29
COL4A6-204ENST00000461897 VTNP04004 478 aa13.24□□□□□ -0.29
COL4A6-204ENST00000461897 RARGP13631 454 aa13.24□□□□□ -0.29
COL4A6-204ENST00000461897 PROZP22891 400 aa13.24□□□□□ -0.29
COL4A6-204ENST00000461897 TNFSF9P41273 254 aa13.24□□□□□ -0.29
COL4A6-204ENST00000461897 GPC3P51654 580 aa13.24□□□□□ -0.29
COL4A6-204ENST00000461897 PLTPP55058 493 aa13.24□□□□□ -0.29
COL4A6-204ENST00000461897 GSCP56915 257 aaPredicted RBP13.24□□□□□ -0.29
COL4A6-204ENST00000461897 XRCC4Q13426 336 aa13.24□□□□□ -0.29
COL4A6-204ENST00000461897 ITIH4Q14624 930 aa13.24□□□□□ -0.29
COL4A6-204ENST00000461897 SIX1Q15475 284 aaPredicted RBP13.24□□□□□ -0.29
COL4A6-204ENST00000461897 TTC27Q6P3X3 843 aa13.24□□□□□ -0.29
COL4A6-204ENST00000461897 PIGWQ7Z7B1 504 aa13.24□□□□□ -0.29
COL4A6-204ENST00000461897 ZBTB33Q86T24 672 aa13.24□□□□□ -0.29
COL4A6-204ENST00000461897 RPUSD2Q8IZ73 545 aaKnown RBP13.24□□□□□ -0.29
COL4A6-204ENST00000461897 FBXL13Q8NEE6 735 aa13.24□□□□□ -0.29
COL4A6-204ENST00000461897 MAGEC3Q8TD91 643 aa13.24□□□□□ -0.29
COL4A6-204ENST00000461897 EPS8L1Q8TE68 723 aa13.24□□□□□ -0.29
COL4A6-204ENST00000461897 KAT5Q92993 513 aa13.24□□□□□ -0.29
COL4A6-204ENST00000461897 ART4Q93070 314 aa13.24□□□□□ -0.29
COL4A6-204ENST00000461897 C18orf8Q96DM3 657 aa13.24□□□□□ -0.29
COL4A6-204ENST00000461897 PPP1R16BQ96T49 567 aa13.24□□□□□ -0.29
COL4A6-204ENST00000461897 INO80BQ9C086 356 aaPredicted RBP13.24□□□□□ -0.29
COL4A6-204ENST00000461897 PTPRHQ9HD43 1115 aa13.24□□□□□ -0.29
COL4A6-204ENST00000461897 SLC40A1Q9NP59 571 aa13.24□□□□□ -0.29
COL4A6-204ENST00000461897 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.24□□□□□ -0.29
COL4A6-204ENST00000461897 KLC4Q9NSK0 619 aa13.24□□□□□ -0.29
COL4A6-204ENST00000461897 AKT3Q9Y243 479 aa13.24□□□□□ -0.29
COL4A6-204ENST00000461897 CNTNAP2Q9UHC6 1331 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms