RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 RFX1P22670 979 aa20.49■□□□□ 0.87
VARS-220ENST00000461874 CCR2P41597 374 aa20.49■□□□□ 0.87
VARS-220ENST00000461874 EPHA5P54756 1037 aa20.49■□□□□ 0.87
VARS-220ENST00000461874 DUSP4Q13115 394 aa20.49■□□□□ 0.87
VARS-220ENST00000461874 SHC4Q6S5L8 630 aa20.49■□□□□ 0.87
VARS-220ENST00000461874 HS6ST3Q8IZP7 471 aa20.49■□□□□ 0.87
VARS-220ENST00000461874 DTWD2Q8NBA8 298 aa20.49■□□□□ 0.87
VARS-220ENST00000461874 LEMD2Q8NC56 503 aa20.49■□□□□ 0.87
VARS-220ENST00000461874 SAAL1Q96ER3 474 aa20.49■□□□□ 0.87
VARS-220ENST00000461874 CRISPLD1Q9H336 500 aa20.49■□□□□ 0.87
VARS-220ENST00000461874 TMEM206Q9H813 350 aa20.49■□□□□ 0.87
VARS-220ENST00000461874 YIPF1Q9Y548 306 aa20.49■□□□□ 0.87
VARS-220ENST00000461874 NRG2O14511 850 aaPredicted RBP20.48■□□□□ 0.87
VARS-220ENST00000461874 PRPF6O94906 941 aaKnown RBP20.48■□□□□ 0.87
VARS-220ENST00000461874 LDHAP00338 332 aaKnown RBP20.48■□□□□ 0.87
VARS-220ENST00000461874 F13A1P00488 732 aa20.48■□□□□ 0.87
VARS-220ENST00000461874 TAF6P49848 677 aa20.48■□□□□ 0.87
VARS-220ENST00000461874 WNT7BP56706 349 aa20.48■□□□□ 0.87
VARS-220ENST00000461874 CENPPQ6IPU0 288 aa20.48■□□□□ 0.87
VARS-220ENST00000461874 ARMCX5Q6P1M9 558 aa20.48■□□□□ 0.87
VARS-220ENST00000461874 BRSK2Q8IWQ3 736 aa20.48■□□□□ 0.87
VARS-220ENST00000461874 IQUBQ8NA54 791 aa20.48■□□□□ 0.87
VARS-220ENST00000461874 DHX58Q96C10 678 aa20.48■□□□□ 0.87
VARS-220ENST00000461874 BORCS6Q96GS4 357 aa20.48■□□□□ 0.87
VARS-220ENST00000461874 TMEM209Q96SK2 561 aa20.48■□□□□ 0.87
VARS-220ENST00000461874 CBWD1Q9BRT8 395 aa20.48■□□□□ 0.87
VARS-220ENST00000461874 TRIM9Q9C026 710 aa20.48■□□□□ 0.87
VARS-220ENST00000461874 ASAH2Q9NR71 780 aa20.48■□□□□ 0.87
VARS-220ENST00000461874 DSEQ9UL01 958 aa20.48■□□□□ 0.87
VARS-220ENST00000461874 ZFHX2Q9C0A1 2572 aaPredicted RBP20.48■□□□□ 0.87
VARS-220ENST00000461874 MTMR11A4FU01 709 aa20.47■□□□□ 0.87
VARS-220ENST00000461874 CYB561D2O14569 222 aa20.47■□□□□ 0.87
VARS-220ENST00000461874 MOSPD3O75425 235 aa20.47■□□□□ 0.87
VARS-220ENST00000461874 STARD6P59095 220 aa20.47■□□□□ 0.87
VARS-220ENST00000461874 AMPD3Q01432 767 aa20.47■□□□□ 0.87
VARS-220ENST00000461874 PFKPQ01813 784 aa20.47■□□□□ 0.87
VARS-220ENST00000461874 PLD1Q13393 1074 aa20.47■□□□□ 0.87
VARS-220ENST00000461874 FOXD4L6Q3SYB3 417 aaPredicted RBP20.47■□□□□ 0.87
VARS-220ENST00000461874 FAM78AQ5JUQ0 283 aa20.47■□□□□ 0.87
VARS-220ENST00000461874 TANGO2Q6ICL3 276 aa20.47■□□□□ 0.87
VARS-220ENST00000461874 FOXD4L3Q6VB84 417 aaPredicted RBP20.47■□□□□ 0.87
VARS-220ENST00000461874 ATAD1Q8NBU5 361 aa20.47■□□□□ 0.87
VARS-220ENST00000461874 OR10T2Q8NGX3 314 aa20.47■□□□□ 0.87
VARS-220ENST00000461874 KCNG4Q8TDN1 519 aa20.47■□□□□ 0.87
VARS-220ENST00000461874 ELSPBP1Q96BH3 223 aa20.47■□□□□ 0.87
VARS-220ENST00000461874 SHDQ96IW2 340 aa20.47■□□□□ 0.87
VARS-220ENST00000461874 PYM1Q9BRP8 204 aaKnown RBP20.47■□□□□ 0.87
VARS-220ENST00000461874 PLA2G2FQ9BZM2 168 aa20.47■□□□□ 0.87
VARS-220ENST00000461874 SLC27A5Q9Y2P5 690 aa20.47■□□□□ 0.87
VARS-220ENST00000461874 GOLGA8IPA6NC78 632 aa20.46■□□□□ 0.87
VARS-220ENST00000461874 GOLGA8JA6NMD2 632 aa20.46■□□□□ 0.87
VARS-220ENST00000461874 EXTL3O43909 919 aa20.46■□□□□ 0.87
VARS-220ENST00000461874 MYL4P12829 197 aa20.46■□□□□ 0.87
VARS-220ENST00000461874 FCARP24071 287 aa20.46■□□□□ 0.87
VARS-220ENST00000461874 EPHB3P54753 998 aa20.46■□□□□ 0.87
VARS-220ENST00000461874 TFAMQ00059 246 aaKnown RBP20.46■□□□□ 0.87
VARS-220ENST00000461874 SNW1Q13573 536 aaKnown RBP20.46■□□□□ 0.87
VARS-220ENST00000461874 SLC44A4Q53GD3 710 aa20.46■□□□□ 0.87
VARS-220ENST00000461874 CNNM4Q6P4Q7 775 aa20.46■□□□□ 0.87
VARS-220ENST00000461874 METTL23Q86XA0 190 aa20.46■□□□□ 0.87
VARS-220ENST00000461874 GLIS3Q8NEA6 775 aa20.46■□□□□ 0.87
VARS-220ENST00000461874 HPS3Q969F9 1004 aa20.46■□□□□ 0.87
VARS-220ENST00000461874 ZSWIM3Q96MP5 696 aa20.46■□□□□ 0.87
VARS-220ENST00000461874 ZCWPW1Q9H0M4 648 aa20.46■□□□□ 0.87
VARS-220ENST00000461874 DNAJC25Q9H1X3 360 aa20.46■□□□□ 0.87
VARS-220ENST00000461874 PCIF1Q9H4Z3 704 aa20.46■□□□□ 0.87
VARS-220ENST00000461874 RBAKQ9NYW8 714 aaPredicted RBP20.46■□□□□ 0.87
VARS-220ENST00000461874 HSFX1Q9UBD0 423 aa20.46■□□□□ 0.87
VARS-220ENST00000461874 SIT1Q9Y3P8 196 aa20.46■□□□□ 0.87
VARS-220ENST00000461874 SCN1AP35498 2009 aa20.45■□□□□ 0.86
VARS-220ENST00000461874 KPNA7A9QM74 516 aa20.45■□□□□ 0.86
VARS-220ENST00000461874 PNPLA4P41247 253 aa20.45■□□□□ 0.86
VARS-220ENST00000461874 ALDH1A3P47895 512 aa20.45■□□□□ 0.86
VARS-220ENST00000461874 PKP1Q13835 747 aa20.45■□□□□ 0.86
VARS-220ENST00000461874 MLF2Q15773 248 aaPredicted RBP20.45■□□□□ 0.86
VARS-220ENST00000461874 SV2CQ496J9 727 aa20.45■□□□□ 0.86
VARS-220ENST00000461874 WSCD1Q658N2 575 aa20.45■□□□□ 0.86
VARS-220ENST00000461874 ATL3Q6DD88 541 aa20.45■□□□□ 0.86
VARS-220ENST00000461874 STXBP4Q6ZWJ1 553 aa20.45■□□□□ 0.86
VARS-220ENST00000461874 CACTINQ8WUQ7 758 aaKnown RBP20.45■□□□□ 0.86
VARS-220ENST00000461874 ZNF560Q96MR9 790 aa20.45■□□□□ 0.86
VARS-220ENST00000461874 ASB16Q96NS5 453 aa20.45■□□□□ 0.86
VARS-220ENST00000461874 C7orf25Q9BPX7 421 aa20.45■□□□□ 0.86
VARS-220ENST00000461874 DDX23Q9BUQ8 820 aaKnown RBP20.45■□□□□ 0.86
VARS-220ENST00000461874 LRRC3Q9BY71 257 aa20.45■□□□□ 0.86
VARS-220ENST00000461874 ZFP14Q9HCL3 533 aa20.45■□□□□ 0.86
VARS-220ENST00000461874 PCDHA7Q9UN72 937 aa20.45■□□□□ 0.86
VARS-220ENST00000461874 ANK1P16157 1881 aa20.45■□□□□ 0.86
VARS-220ENST00000461874 PROB1E7EW31 1015 aa20.44■□□□□ 0.86
VARS-220ENST00000461874 TULP1O00294 542 aaPredicted RBP20.44■□□□□ 0.86
VARS-220ENST00000461874 KIAA0391O15091 583 aaKnown RBP20.44■□□□□ 0.86
VARS-220ENST00000461874 DCNP07585 359 aaKnown RBP20.44■□□□□ 0.86
VARS-220ENST00000461874 GJA1P17302 382 aa20.44■□□□□ 0.86
VARS-220ENST00000461874 HOXD13P35453 343 aa20.44■□□□□ 0.86
VARS-220ENST00000461874 NBL1P41271 181 aa20.44■□□□□ 0.86
VARS-220ENST00000461874 ASIC1P78348 528 aa20.44■□□□□ 0.86
VARS-220ENST00000461874 PRKCQQ04759 706 aa20.44■□□□□ 0.86
VARS-220ENST00000461874 ANGPT1Q15389 498 aa20.44■□□□□ 0.86
VARS-220ENST00000461874 SLC39A12Q504Y0 691 aa20.44■□□□□ 0.86
VARS-220ENST00000461874 TMC8Q8IU68 726 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms