RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 TBC1D4O60343 1298 aa11.4□□□□□ -0.58
TRAPPC12-213ENST00000461577 HUS1O60921 280 aa11.4□□□□□ -0.58
TRAPPC12-213ENST00000461577 PHACTR2O75167 634 aa11.4□□□□□ -0.58
TRAPPC12-213ENST00000461577 RFPL2O75678 378 aa11.4□□□□□ -0.58
TRAPPC12-213ENST00000461577 ZMYND10O75800 440 aa11.4□□□□□ -0.58
TRAPPC12-213ENST00000461577 CLSTN1O94985 981 aa11.4□□□□□ -0.58
TRAPPC12-213ENST00000461577 OAZ2O95190 189 aa11.4□□□□□ -0.58
TRAPPC12-213ENST00000461577 CYP11A1P05108 521 aa11.4□□□□□ -0.58
TRAPPC12-213ENST00000461577 C8AP07357 584 aa11.4□□□□□ -0.58
TRAPPC12-213ENST00000461577 PPP1R2P41236 205 aa11.4□□□□□ -0.58
TRAPPC12-213ENST00000461577 CASP4P49662 377 aa11.4□□□□□ -0.58
TRAPPC12-213ENST00000461577 AP3M2P53677 418 aa11.4□□□□□ -0.58
TRAPPC12-213ENST00000461577 ZP2Q05996 745 aa11.4□□□□□ -0.58
TRAPPC12-213ENST00000461577 ADAM9Q13443 819 aa11.4□□□□□ -0.58
TRAPPC12-213ENST00000461577 TRPC3Q13507 836 aa11.4□□□□□ -0.58
TRAPPC12-213ENST00000461577 COBLL1Q53SF7 1204 aa11.4□□□□□ -0.58
TRAPPC12-213ENST00000461577 C15orf39Q6ZRI6 1047 aa11.4□□□□□ -0.58
TRAPPC12-213ENST00000461577 CCDC149Q6ZUS6 474 aa11.4□□□□□ -0.58
TRAPPC12-213ENST00000461577 TRAPPC11Q7Z392 1133 aa11.4□□□□□ -0.58
TRAPPC12-213ENST00000461577 GJD3Q8N144 294 aa11.4□□□□□ -0.58
TRAPPC12-213ENST00000461577 ZNF461Q8TAF7 563 aa11.4□□□□□ -0.58
TRAPPC12-213ENST00000461577 SMG7Q92540 1137 aaKnown RBP11.4□□□□□ -0.58
TRAPPC12-213ENST00000461577 RPGRIP1Q96KN7 1286 aa11.4□□□□□ -0.58
TRAPPC12-213ENST00000461577 PRKD2Q9BZL6 878 aa11.4□□□□□ -0.58
TRAPPC12-213ENST00000461577 POMKQ9H5K3 350 aa11.4□□□□□ -0.58
TRAPPC12-213ENST00000461577 SIX4Q9UIU6 781 aa11.4□□□□□ -0.58
TRAPPC12-213ENST00000461577 CDH22Q9UJ99 828 aa11.4□□□□□ -0.58
TRAPPC12-213ENST00000461577 NR2E1Q9Y466 385 aa11.4□□□□□ -0.58
TRAPPC12-213ENST00000461577 TSC2P49815 1807 aa11.39□□□□□ -0.59
TRAPPC12-213ENST00000461577 LRRIQ3A6PVS8 624 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC12-213ENST00000461577 GOLGA6L22H0YM25 854 aa11.39□□□□□ -0.59
TRAPPC12-213ENST00000461577 PRRG1O14668 218 aa11.39□□□□□ -0.59
TRAPPC12-213ENST00000461577 CETN3O15182 167 aa11.39□□□□□ -0.59
TRAPPC12-213ENST00000461577 MAPK13O15264 365 aa11.39□□□□□ -0.59
TRAPPC12-213ENST00000461577 XYLBO75191 536 aa11.39□□□□□ -0.59
TRAPPC12-213ENST00000461577 ABLIM3O94929 683 aa11.39□□□□□ -0.59
TRAPPC12-213ENST00000461577 HNRNPA1P09651 372 aaKnown RBP eCLIP11.39□□□□□ -0.59
TRAPPC12-213ENST00000461577 KRT13P13646 458 aa11.39□□□□□ -0.59
TRAPPC12-213ENST00000461577 BIRC3Q13489 604 aa11.39□□□□□ -0.59
TRAPPC12-213ENST00000461577 UVSSAQ2YD98 709 aa11.39□□□□□ -0.59
TRAPPC12-213ENST00000461577 EDRF1Q3B7T1 1238 aa11.39□□□□□ -0.59
TRAPPC12-213ENST00000461577 WSCD1Q658N2 575 aa11.39□□□□□ -0.59
TRAPPC12-213ENST00000461577 TPGS2Q68CL5 300 aa11.39□□□□□ -0.59
TRAPPC12-213ENST00000461577 CLEC17AQ6ZS10 378 aa11.39□□□□□ -0.59
TRAPPC12-213ENST00000461577 RTL10Q7L3V2 364 aa11.39□□□□□ -0.59
TRAPPC12-213ENST00000461577 FAM186BQ8IYM0 893 aa11.39□□□□□ -0.59
TRAPPC12-213ENST00000461577 SLC7A14Q8TBB6 771 aa11.39□□□□□ -0.59
TRAPPC12-213ENST00000461577 TMC2Q8TDI7 906 aa11.39□□□□□ -0.59
TRAPPC12-213ENST00000461577 PARD3BQ8TEW8 1205 aa11.39□□□□□ -0.59
TRAPPC12-213ENST00000461577 BORCS6Q96GS4 357 aa11.39□□□□□ -0.59
TRAPPC12-213ENST00000461577 HPDLQ96IR7 371 aa11.39□□□□□ -0.59
TRAPPC12-213ENST00000461577 CYP4F11Q9HBI6 524 aa11.39□□□□□ -0.59
TRAPPC12-213ENST00000461577 AFF4Q9UHB7 1163 aaKnown RBP11.39□□□□□ -0.59
TRAPPC12-213ENST00000461577 SNX9Q9Y5X1 595 aa11.39□□□□□ -0.59
TRAPPC12-213ENST00000461577 C19orf67A6NJJ6 358 aa11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 BIN1O00499 593 aa11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 PSMA7O14818 248 aa11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 CCL16O15467 120 aa11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 LRG1P02750 347 aa11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 OR4Q2P0C623 313 aa11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 EPB41P11171 864 aaKnown RBP11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 ATF2P15336 505 aa11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 SP100P23497 879 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 HOXA9P31269 272 aa11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 PSMC2P35998 433 aaKnown RBP11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 VAMP7P51809 220 aa11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 MYL7Q01449 175 aa11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 ADCY1Q08828 1119 aa11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 CAMK4Q16566 473 aa11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 ZCWPW2Q504Y3 356 aa11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 SCARA3Q6AZY7 606 aa11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 CENPPQ6IPU0 288 aa11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 RNF19BQ6ZMZ0 732 aa11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 INTS8Q75QN2 995 aaKnown RBP11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 ADSSL1Q8N142 457 aa11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 TMEM86AQ8N2M4 240 aa11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 PDCL2Q8N4E4 241 aa11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 TOP6BLQ8N6T0 577 aa11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 CXorf38Q8TB03 319 aa11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 PLEKHO2Q8TD55 490 aa11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 ZNF516Q92618 1163 aa11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 DHTKD1Q96HY7 919 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 PGLYRP2Q96PD5 576 aa11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 RHOBTB2Q9BYZ6 727 aa11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 GDAP2Q9NXN4 497 aa11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 MAFFQ9ULX9 164 aa11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 POLIQ9UNA4 740 aa11.38□□□□□ -0.59
TRAPPC12-213ENST00000461577 LOC730098B7Z3J9 87 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 AKAP3O75969 853 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 SEC24AO95486 1093 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 CST3P01034 146 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 C4BPAP04003 597 aaKnown RBP11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 CCNE1P24864 410 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 ATICP31939 592 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 TNNC1P63316 161 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 DLG4P78352 724 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 FKBP3Q00688 224 aaKnown RBP11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 TSPY1Q01534 308 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 LRRC63Q05C16 580 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 GPR17Q13304 367 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms