RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 CUTAO60888 179 aa16.78■□□□□ 0.28
NUP50-213ENST00000461437 MOSPD3O75425 235 aa16.78■□□□□ 0.28
NUP50-213ENST00000461437 YEATS4O95619 227 aa16.78■□□□□ 0.28
NUP50-213ENST00000461437 RFX1P22670 979 aa16.78■□□□□ 0.28
NUP50-213ENST00000461437 CLCN5P51795 746 aa16.78■□□□□ 0.28
NUP50-213ENST00000461437 TANGO2Q6ICL3 276 aa16.78■□□□□ 0.28
NUP50-213ENST00000461437 GPIHBP1Q8IV16 184 aa16.78■□□□□ 0.28
NUP50-213ENST00000461437 ATAD1Q8NBU5 361 aa16.78■□□□□ 0.28
NUP50-213ENST00000461437 NXPE3Q969Y0 559 aa16.78■□□□□ 0.28
NUP50-213ENST00000461437 ZSWIM3Q96MP5 696 aa16.78■□□□□ 0.28
NUP50-213ENST00000461437 RTP3Q9BQQ7 232 aa16.78■□□□□ 0.28
NUP50-213ENST00000461437 PYM1Q9BRP8 204 aaKnown RBP16.78■□□□□ 0.28
NUP50-213ENST00000461437 FOXQ1Q9C009 403 aa16.78■□□□□ 0.28
NUP50-213ENST00000461437 DNAJC25Q9H1X3 360 aa16.78■□□□□ 0.28
NUP50-213ENST00000461437 BLZF1Q9H2G9 400 aa16.78■□□□□ 0.28
NUP50-213ENST00000461437 ASB7Q9H672 318 aa16.78■□□□□ 0.28
NUP50-213ENST00000461437 ARHGEF3Q9NR81 526 aa16.78■□□□□ 0.28
NUP50-213ENST00000461437 KCNH3Q9ULD8 1083 aa16.78■□□□□ 0.28
NUP50-213ENST00000461437 EXOC7Q9UPT5 735 aa16.78■□□□□ 0.28
NUP50-213ENST00000461437 CACNA1IQ9P0X4 2223 aa16.78■□□□□ 0.28
NUP50-213ENST00000461437 OBSL1O75147 1896 aa16.78■□□□□ 0.28
NUP50-213ENST00000461437 NCANO14594 1321 aa16.77■□□□□ 0.28
NUP50-213ENST00000461437 COL4A2P08572 1712 aa16.77■□□□□ 0.28
NUP50-213ENST00000461437 DCNP07585 359 aaKnown RBP16.77■□□□□ 0.28
NUP50-213ENST00000461437 ODC1P11926 461 aa16.77■□□□□ 0.28
NUP50-213ENST00000461437 TYMPP19971 482 aa16.77■□□□□ 0.28
NUP50-213ENST00000461437 ABCD1P33897 745 aa16.77■□□□□ 0.28
NUP50-213ENST00000461437 HOXD13P35453 343 aa16.77■□□□□ 0.28
NUP50-213ENST00000461437 ASIC1P78348 528 aa16.77■□□□□ 0.28
NUP50-213ENST00000461437 TFAMQ00059 246 aaKnown RBP16.77■□□□□ 0.28
NUP50-213ENST00000461437 DNM1Q05193 864 aaKnown RBP16.77■□□□□ 0.28
NUP50-213ENST00000461437 SNW1Q13573 536 aaKnown RBP16.77■□□□□ 0.28
NUP50-213ENST00000461437 GRM2Q14416 872 aa16.77■□□□□ 0.28
NUP50-213ENST00000461437 MTSS1LQ765P7 747 aa16.77■□□□□ 0.28
NUP50-213ENST00000461437 PDZD4Q76G19 769 aaPredicted RBP16.77■□□□□ 0.28
NUP50-213ENST00000461437 BRSK2Q8IWQ3 736 aa16.77■□□□□ 0.28
NUP50-213ENST00000461437 CCDC65Q8IXS2 484 aa16.77■□□□□ 0.28
NUP50-213ENST00000461437 GRAMD1CQ8IYS0 662 aa16.77■□□□□ 0.28
NUP50-213ENST00000461437 PRRX2Q99811 253 aa16.77■□□□□ 0.28
NUP50-213ENST00000461437 TRIM9Q9C026 710 aa16.77■□□□□ 0.28
NUP50-213ENST00000461437 KBTBD4Q9NVX7 518 aa16.77■□□□□ 0.28
NUP50-213ENST00000461437 RBAKQ9NYW8 714 aaPredicted RBP16.77■□□□□ 0.28
NUP50-213ENST00000461437 PCDHA7Q9UN72 937 aa16.77■□□□□ 0.28
NUP50-213ENST00000461437 DERAQ9Y315 318 aa16.77■□□□□ 0.28
NUP50-213ENST00000461437 C2CD2Q9Y426 696 aa16.77■□□□□ 0.28
NUP50-213ENST00000461437 PCDHB13Q9Y5F0 798 aa16.77■□□□□ 0.28
NUP50-213ENST00000461437 ZFP37Q9Y6Q3 630 aaPredicted RBP16.77■□□□□ 0.28
NUP50-213ENST00000461437 USP34Q70CQ2 3546 aa16.76■□□□□ 0.27
NUP50-213ENST00000461437 CYB561D2O14569 222 aa16.76■□□□□ 0.27
NUP50-213ENST00000461437 POLR2DO15514 142 aaKnown RBP16.76■□□□□ 0.27
NUP50-213ENST00000461437 ITGB3P05106 788 aa16.76■□□□□ 0.27
NUP50-213ENST00000461437 CD72P21854 359 aa16.76■□□□□ 0.27
NUP50-213ENST00000461437 FCARP24071 287 aa16.76■□□□□ 0.27
NUP50-213ENST00000461437 POLR2BP30876 1174 aaKnown RBP16.76■□□□□ 0.27
NUP50-213ENST00000461437 TAF6P49848 677 aa16.76■□□□□ 0.27
NUP50-213ENST00000461437 POSTNQ15063 836 aa16.76■□□□□ 0.27
NUP50-213ENST00000461437 TEAD2Q15562 447 aa16.76■□□□□ 0.27
NUP50-213ENST00000461437 SLC39A12Q504Y0 691 aa16.76■□□□□ 0.27
NUP50-213ENST00000461437 FAM78AQ5JUQ0 283 aa16.76■□□□□ 0.27
NUP50-213ENST00000461437 WSCD1Q658N2 575 aa16.76■□□□□ 0.27
NUP50-213ENST00000461437 ARMCX5Q6P1M9 558 aa16.76■□□□□ 0.27
NUP50-213ENST00000461437 STKLD1Q8NE28 680 aa16.76■□□□□ 0.27
NUP50-213ENST00000461437 BORCS6Q96GS4 357 aa16.76■□□□□ 0.27
NUP50-213ENST00000461437 ZNF512Q96ME7 567 aaPredicted RBP16.76■□□□□ 0.27
NUP50-213ENST00000461437 TNMDQ9H2S6 317 aa16.76■□□□□ 0.27
NUP50-213ENST00000461437 PDE11AQ9HCR9 933 aa16.76■□□□□ 0.27
NUP50-213ENST00000461437 ZNF334Q9HCZ1 680 aaPredicted RBP16.76■□□□□ 0.27
NUP50-213ENST00000461437 SLC2A4RGQ9NR83 387 aa16.76■□□□□ 0.27
NUP50-213ENST00000461437 NUP210Q8TEM1 1887 aaPredicted RBP16.76■□□□□ 0.27
NUP50-213ENST00000461437 PATJQ8NI35 1801 aa16.75■□□□□ 0.27
NUP50-213ENST00000461437 PTPRJQ12913 1337 aa16.75■□□□□ 0.27
NUP50-213ENST00000461437 OR6C75A6NL08 312 aa16.75■□□□□ 0.27
NUP50-213ENST00000461437 HCRTO43612 131 aa16.75■□□□□ 0.27
NUP50-213ENST00000461437 VIPR2P41587 438 aa16.75■□□□□ 0.27
NUP50-213ENST00000461437 AFMP43652 599 aa16.75■□□□□ 0.27
NUP50-213ENST00000461437 ME1P48163 572 aa16.75■□□□□ 0.27
NUP50-213ENST00000461437 GPR17Q13304 367 aa16.75■□□□□ 0.27
NUP50-213ENST00000461437 CCDC142Q17RM4 750 aa16.75■□□□□ 0.27
NUP50-213ENST00000461437 STXBP5Q5T5C0 1151 aa16.75■□□□□ 0.27
NUP50-213ENST00000461437 IQCEQ6IPM2 695 aa16.75■□□□□ 0.27
NUP50-213ENST00000461437 CENPPQ6IPU0 288 aa16.75■□□□□ 0.27
NUP50-213ENST00000461437 RTL10Q7L3V2 364 aa16.75■□□□□ 0.27
NUP50-213ENST00000461437 LRRTM3Q86VH5 581 aa16.75■□□□□ 0.27
NUP50-213ENST00000461437 TMC8Q8IU68 726 aa16.75■□□□□ 0.27
NUP50-213ENST00000461437 CCDC105Q8IYK2 499 aa16.75■□□□□ 0.27
NUP50-213ENST00000461437 ELMOD1Q8N336 334 aa16.75■□□□□ 0.27
NUP50-213ENST00000461437 C1orf127Q8N9H9 656 aa16.75■□□□□ 0.27
NUP50-213ENST00000461437 DTWD2Q8NBA8 298 aa16.75■□□□□ 0.27
NUP50-213ENST00000461437 SHKBP1Q8TBC3 707 aa16.75■□□□□ 0.27
NUP50-213ENST00000461437 TSPAN18Q96SJ8 248 aa16.75■□□□□ 0.27
NUP50-213ENST00000461437 LPIN3Q9BQK8 851 aa16.75■□□□□ 0.27
NUP50-213ENST00000461437 AVENQ9NQS1 362 aaPredicted RBP16.75■□□□□ 0.27
NUP50-213ENST00000461437 AGAP1Q9UPQ3 857 aa16.75■□□□□ 0.27
NUP50-213ENST00000461437 A0A1W2PRU2 124 aa16.74■□□□□ 0.27
NUP50-213ENST00000461437 IL18RAPO95256 599 aa16.74■□□□□ 0.27
NUP50-213ENST00000461437 CYP11A1P05108 521 aa16.74■□□□□ 0.27
NUP50-213ENST00000461437 GLULP15104 373 aa16.74■□□□□ 0.27
NUP50-213ENST00000461437 GARTP22102 1010 aa16.74■□□□□ 0.27
NUP50-213ENST00000461437 BFSP1Q12934 665 aa16.74■□□□□ 0.27
NUP50-213ENST00000461437 CYP4A22Q5TCH4 519 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms