RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 IPO13O94829 963 aaKnown RBP3.8□□□□□ -1.8
VCL-203ENST00000461383 AGFG2O95081 481 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 CNOT4O95628 575 aaKnown RBP3.8□□□□□ -1.8
VCL-203ENST00000461383 ABHD16AO95870 558 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 ANXA2P07355 339 aaKnown RBP3.8□□□□□ -1.8
VCL-203ENST00000461383 GRPP07492 148 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 BMP7P18075 431 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 MGAT1P26572 445 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 CHKAP35790 457 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 RPS19P39019 145 aaKnown RBP3.8□□□□□ -1.8
VCL-203ENST00000461383 CARSP49589 748 aaKnown RBP3.8□□□□□ -1.8
VCL-203ENST00000461383 ARFIP2P53365 341 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 PPP2CBP62714 309 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 PPP2CAP67775 309 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 POU6F2P78424 691 aaPredicted RBP3.8□□□□□ -1.8
VCL-203ENST00000461383 CTBP1Q13363 440 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 BIRC3Q13489 604 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 NFIXQ14938 502 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 UBXN2BQ14CS0 331 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 SURF1Q15526 300 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 GGT6Q6P531 493 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 FBXO38Q6PIJ6 1188 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 RNF44Q7L0R7 432 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 BEND5Q7L4P6 421 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 SMAP1Q8IYB5 467 aaPredicted RBP3.8□□□□□ -1.8
VCL-203ENST00000461383 SDR16C5Q8N3Y7 309 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 DNAJC5GQ8N7S2 189 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 ZNF527Q8NB42 609 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 SPATA5Q8NB90 893 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 TP53I13Q8NBR0 393 aaPredicted RBP3.8□□□□□ -1.8
VCL-203ENST00000461383 RNF169Q8NCN4 708 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 CCDC150Q8NCX0 1101 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 SLC17A8Q8NDX2 589 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 TRIM43Q96BQ3 446 aaPredicted RBP3.8□□□□□ -1.8
VCL-203ENST00000461383 COLEC11Q9BWP8 271 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 KRTAP9-8Q9BYQ0 159 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 IMPG2Q9BZV3 1241 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 REXO4Q9GZR2 422 aaKnown RBP3.8□□□□□ -1.8
VCL-203ENST00000461383 MSL2Q9HCI7 577 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 A1CFQ9NQ94 594 aaKnown RBP3.8□□□□□ -1.8
VCL-203ENST00000461383 COL20A1Q9P218 1284 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 ZNF212Q9UDV6 495 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 PLEKHM1Q9Y4G2 1056 aa3.8□□□□□ -1.8
VCL-203ENST00000461383 ZNF536O15090 1300 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 A0A087WV62 115 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 PYCARD-AS1I3L0S3 204 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 MATN2O00339 956 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 ADAMTS3O15072 1205 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 FFAR2O15552 330 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 SKAP2O75563 359 aaPredicted RBP3.79□□□□□ -1.8
VCL-203ENST00000461383 CHEK2O96017 543 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 ITGB1P05556 798 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 FGFR2P21802 821 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 PAX3P23760 479 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 KLRC1P26715 233 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 IL6STP40189 918 aaPredicted RBP3.79□□□□□ -1.8
VCL-203ENST00000461383 KRTAP10-2P60368 255 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 SATB1Q01826 763 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 BLMHQ13867 455 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 GRM7Q14831 915 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 ELAVL1Q15717 326 aaKnown RBP3.79□□□□□ -1.8
VCL-203ENST00000461383 BMT2Q1RMZ1 405 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 CCDC38Q502W7 563 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 UNC13DQ70J99 1090 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 MED25Q71SY5 747 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 DOK3Q7L591 496 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 APBB1IPQ7Z5R6 666 aaPredicted RBP3.79□□□□□ -1.8
VCL-203ENST00000461383 FRMD5Q7Z6J6 570 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 USP37Q86T82 979 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 TAX1BP1Q86VP1 789 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 SP8Q8IXZ3 490 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 GPR135Q8IZ08 494 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 FAM9AQ8IZU1 332 aaPredicted RBP3.79□□□□□ -1.8
VCL-203ENST00000461383 PAF1Q8N7H5 531 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 MB21D1Q8N884 522 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 FANCBQ8NB91 859 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 FAM46DQ8NEK8 389 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 ST8SIA2Q92186 375 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 SCAMP4Q969E2 229 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 MUL1Q969V5 352 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 LRRC46Q96FV0 321 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 BORCS6Q96GS4 357 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 TMEM41AQ96HV5 264 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 CNPPD1Q9BV87 410 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 PLA2G12BQ9BX93 195 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 AGO3Q9H9G7 860 aaKnown RBP3.79□□□□□ -1.8
VCL-203ENST00000461383 SEC61A2Q9H9S3 476 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 TBC1D23Q9NUY8 699 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 FBXO34Q9NWN3 711 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 ZSCAN32Q9NX65 697 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 SLC45A2Q9UMX9 530 aa3.79□□□□□ -1.8
VCL-203ENST00000461383 PNPLA7Q6ZV29 1317 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 A0A1W2PPC4 97 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 KLRG2A4D1S0 409 aaPredicted RBP3.78□□□□□ -1.8
VCL-203ENST00000461383 MBD3L4A6NDZ8 208 aaPredicted RBP3.78□□□□□ -1.8
VCL-203ENST00000461383 MBD3L3A6NE82 208 aaPredicted RBP3.78□□□□□ -1.8
VCL-203ENST00000461383 TMEM233B4DJY2 109 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 LAMTOR5O43504 91 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 SH3BP5O60239 455 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 NOBOXO60393 691 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms