RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 OR1G1P47890 313 aa15.47■□□□□ 0.07
COL5A3-202ENST00000461214 SLC11A1P49279 550 aa15.47■□□□□ 0.07
COL5A3-202ENST00000461214 UBXN1Q04323 297 aa15.47■□□□□ 0.07
COL5A3-202ENST00000461214 ELAVL2Q12926 359 aaKnown RBP15.47■□□□□ 0.07
COL5A3-202ENST00000461214 SPOUT1Q5T280 376 aaKnown RBP15.47■□□□□ 0.07
COL5A3-202ENST00000461214 SMYD5Q6GMV2 418 aa15.47■□□□□ 0.07
COL5A3-202ENST00000461214 TRIM65Q6PJ69 517 aa15.47■□□□□ 0.07
COL5A3-202ENST00000461214 DCLRE1AQ6PJP8 1040 aa15.47■□□□□ 0.07
COL5A3-202ENST00000461214 KCNT2Q6UVM3 1135 aa15.47■□□□□ 0.07
COL5A3-202ENST00000461214 PRSS33Q8NF86 280 aa15.47■□□□□ 0.07
COL5A3-202ENST00000461214 HPDLQ96IR7 371 aa15.47■□□□□ 0.07
COL5A3-202ENST00000461214 FAM81BQ96LP2 452 aa15.47■□□□□ 0.07
COL5A3-202ENST00000461214 PLVAPQ9BX97 442 aa15.47■□□□□ 0.07
COL5A3-202ENST00000461214 IFNKQ9P0W0 207 aa15.47■□□□□ 0.07
COL5A3-202ENST00000461214 HCSTQ9UBK5 93 aa15.47■□□□□ 0.07
COL5A3-202ENST00000461214 ADAM28Q9UKQ2 775 aa15.47■□□□□ 0.07
COL5A3-202ENST00000461214 FAN1Q9Y2M0 1017 aa15.47■□□□□ 0.07
COL5A3-202ENST00000461214 PCDHB12Q9Y5F1 795 aa15.47■□□□□ 0.07
COL5A3-202ENST00000461214 SF3B1O75533 1304 aaKnown RBP eCLIP15.46■□□□□ 0.07
COL5A3-202ENST00000461214 LINC01553A4QN01 128 aa15.46■□□□□ 0.07
COL5A3-202ENST00000461214 NRP1O14786 923 aa15.46■□□□□ 0.07
COL5A3-202ENST00000461214 TRAPPC3O43617 180 aa15.46■□□□□ 0.07
COL5A3-202ENST00000461214 B3GAT3O94766 335 aa15.46■□□□□ 0.07
COL5A3-202ENST00000461214 ALDH2P05091 517 aa15.46■□□□□ 0.07
COL5A3-202ENST00000461214 P4HA1P13674 534 aa15.46■□□□□ 0.07
COL5A3-202ENST00000461214 MYL6P60660 151 aa15.46■□□□□ 0.07
COL5A3-202ENST00000461214 ZNF667Q5HYK9 610 aa15.46■□□□□ 0.07
COL5A3-202ENST00000461214 WDR44Q5JSH3 913 aa15.46■□□□□ 0.07
COL5A3-202ENST00000461214 SLC39A11Q8N1S5 342 aa15.46■□□□□ 0.07
COL5A3-202ENST00000461214 C3orf58Q8NDZ4 430 aa15.46■□□□□ 0.07
COL5A3-202ENST00000461214 LMO3Q8TAP4 145 aa15.46■□□□□ 0.07
COL5A3-202ENST00000461214 NT5C1BQ96P26 610 aa15.46■□□□□ 0.07
COL5A3-202ENST00000461214 TGS1Q96RS0 853 aaKnown RBP15.46■□□□□ 0.07
COL5A3-202ENST00000461214 PAAF1Q9BRP4 392 aa15.46■□□□□ 0.07
COL5A3-202ENST00000461214 NIF3L1Q9GZT8 377 aa15.46■□□□□ 0.07
COL5A3-202ENST00000461214 INTS2Q9H0H0 1204 aaKnown RBP15.46■□□□□ 0.07
COL5A3-202ENST00000461214 PLCB1Q9NQ66 1216 aa15.46■□□□□ 0.07
COL5A3-202ENST00000461214 MARCH5Q9NX47 278 aa15.46■□□□□ 0.07
COL5A3-202ENST00000461214 GDAP2Q9NXN4 497 aa15.46■□□□□ 0.07
COL5A3-202ENST00000461214 CACNG4Q9UBN1 327 aa15.46■□□□□ 0.07
COL5A3-202ENST00000461214 NUB1Q9Y5A7 615 aa15.46■□□□□ 0.07
COL5A3-202ENST00000461214 WDFY4Q6ZS81 3184 aa15.46■□□□□ 0.06
COL5A3-202ENST00000461214 KPNA7A9QM74 516 aa15.45■□□□□ 0.06
COL5A3-202ENST00000461214 C5orf67F2Z3F1 127 aa15.45■□□□□ 0.06
COL5A3-202ENST00000461214 PPEF2O14830 753 aa15.45■□□□□ 0.06
COL5A3-202ENST00000461214 GFRA3O60609 400 aa15.45■□□□□ 0.06
COL5A3-202ENST00000461214 CST3P01034 146 aaPredicted RBP15.45■□□□□ 0.06
COL5A3-202ENST00000461214 TBXAS1P24557 533 aaPredicted RBP15.45■□□□□ 0.06
COL5A3-202ENST00000461214 LILRA4P59901 499 aa15.45■□□□□ 0.06
COL5A3-202ENST00000461214 TNNC1P63316 161 aa15.45■□□□□ 0.06
COL5A3-202ENST00000461214 ZP2Q05996 745 aa15.45■□□□□ 0.06
COL5A3-202ENST00000461214 NR1I3Q14994 352 aa15.45■□□□□ 0.06
COL5A3-202ENST00000461214 PUS10Q3MIT2 529 aaKnown RBP15.45■□□□□ 0.06
COL5A3-202ENST00000461214 IER5LQ5T953 404 aa15.45■□□□□ 0.06
COL5A3-202ENST00000461214 SPATA18Q8TC71 538 aa15.45■□□□□ 0.06
COL5A3-202ENST00000461214 SEMA4DQ92854 862 aa15.45■□□□□ 0.06
COL5A3-202ENST00000461214 IQCDQ96DY2 449 aa15.45■□□□□ 0.06
COL5A3-202ENST00000461214 IGSF21Q96ID5 467 aa15.45■□□□□ 0.06
COL5A3-202ENST00000461214 SUSD3Q96L08 255 aa15.45■□□□□ 0.06
COL5A3-202ENST00000461214 XPO4Q9C0E2 1151 aaKnown RBP15.45■□□□□ 0.06
COL5A3-202ENST00000461214 GRPEL1Q9HAV7 217 aa15.45■□□□□ 0.06
COL5A3-202ENST00000461214 FAM86C1Q9NVL1 165 aa15.45■□□□□ 0.06
COL5A3-202ENST00000461214 SPG21Q9NZD8 308 aa15.45■□□□□ 0.06
COL5A3-202ENST00000461214 APEX2Q9UBZ4 518 aa15.45■□□□□ 0.06
COL5A3-202ENST00000461214 SIK3Q9Y2K2 1263 aa15.45■□□□□ 0.06
COL5A3-202ENST00000461214 PRG3Q9Y2Y8 225 aaPredicted RBP15.45■□□□□ 0.06
COL5A3-202ENST00000461214 MYO16Q9Y6X6 1858 aa15.45■□□□□ 0.06
COL5A3-202ENST00000461214 GREB1Q4ZG55 1949 aa15.45■□□□□ 0.06
COL5A3-202ENST00000461214 ITIH6Q6UXX5 1313 aa15.44■□□□□ 0.06
COL5A3-202ENST00000461214 M0QZQ0 153 aa15.44■□□□□ 0.06
COL5A3-202ENST00000461214 CLSTN1O94985 981 aa15.44■□□□□ 0.06
COL5A3-202ENST00000461214 ODC1P11926 461 aa15.44■□□□□ 0.06
COL5A3-202ENST00000461214 PON1P27169 355 aa15.44■□□□□ 0.06
COL5A3-202ENST00000461214 CTNNB1P35222 781 aa15.44■□□□□ 0.06
COL5A3-202ENST00000461214 PBX1P40424 430 aa15.44■□□□□ 0.06
COL5A3-202ENST00000461214 PTPN5P54829 565 aa15.44■□□□□ 0.06
COL5A3-202ENST00000461214 GCNT1Q02742 428 aa15.44■□□□□ 0.06
COL5A3-202ENST00000461214 SYCP1Q15431 976 aa15.44■□□□□ 0.06
COL5A3-202ENST00000461214 ENOSF1Q7L5Y1 443 aa15.44■□□□□ 0.06
COL5A3-202ENST00000461214 DPH6Q7L8W6 267 aa15.44■□□□□ 0.06
COL5A3-202ENST00000461214 RNF168Q8IYW5 571 aaPredicted RBP15.44■□□□□ 0.06
COL5A3-202ENST00000461214 TOP6BLQ8N6T0 577 aa15.44■□□□□ 0.06
COL5A3-202ENST00000461214 EHBP1Q8NDI1 1231 aa15.44■□□□□ 0.06
COL5A3-202ENST00000461214 TMEM169Q96HH4 297 aa15.44■□□□□ 0.06
COL5A3-202ENST00000461214 MRFAP1L1Q96HT8 127 aa15.44■□□□□ 0.06
COL5A3-202ENST00000461214 NAP1L5Q96NT1 182 aaPredicted RBP15.44■□□□□ 0.06
COL5A3-202ENST00000461214 CRACR2AQ9BSW2 395 aa15.44■□□□□ 0.06
COL5A3-202ENST00000461214 TRIM5Q9C035 493 aa15.44■□□□□ 0.06
COL5A3-202ENST00000461214 MUTYHQ9UIF7 546 aa15.44■□□□□ 0.06
COL5A3-202ENST00000461214 FBXL5Q9UKA1 691 aa15.44■□□□□ 0.06
COL5A3-202ENST00000461214 DSEQ9UL01 958 aa15.44■□□□□ 0.06
COL5A3-202ENST00000461214 SYN3O14994 580 aa15.43■□□□□ 0.06
COL5A3-202ENST00000461214 TEX33O43247 280 aa15.43■□□□□ 0.06
COL5A3-202ENST00000461214 EFEMP2O95967 443 aa15.43■□□□□ 0.06
COL5A3-202ENST00000461214 ITGB1P05556 798 aa15.43■□□□□ 0.06
COL5A3-202ENST00000461214 RB1P06400 928 aa15.43■□□□□ 0.06
COL5A3-202ENST00000461214 IRS1P35568 1242 aa15.43■□□□□ 0.06
COL5A3-202ENST00000461214 BMPR1AP36894 532 aa15.43■□□□□ 0.06
COL5A3-202ENST00000461214 ERVK-21P61565 698 aa15.43■□□□□ 0.06
COL5A3-202ENST00000461214 PLCB2Q00722 1185 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms