RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 RPLP2P05387 115 aaKnown RBP4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 LAMP2P13473 410 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 DRD2P14416 443 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 PDE6AP16499 860 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 CSRP1P21291 193 aaKnown RBP4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 CD72P21854 359 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 RDXP35241 583 aaKnown RBP4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 MASP1P48740 699 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 SARSP49591 514 aaKnown RBP4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 GPC5P78333 572 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 ADCY1Q08828 1119 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 MGAT3Q09327 533 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 TTF1Q15361 905 aaPredicted RBP4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 STXBP2Q15833 593 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 HSDL1Q3SXM5 330 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 SLC44A4Q53GD3 710 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 CYP26C1Q6V0L0 522 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 FAM43BQ6ZT52 329 aaPredicted RBP4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 PHACTR4Q8IZ21 702 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 MFSD2AQ8NA29 543 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 SPATA18Q8TC71 538 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 NSUN6Q8TEA1 469 aaKnown RBP4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 SLC22A17Q8WUG5 538 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 LMBR1Q8WVP7 490 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 CEP95Q96GE4 821 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 LOXL4Q96JB6 756 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 PSMG3-AS1Q96PY0 264 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 EDEM2Q9BV94 578 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 ACSS3Q9H6R3 686 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 CWH43Q9H720 699 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 ARMT1Q9H993 441 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 AGO3Q9H9G7 860 aaKnown RBP4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 WDR6Q9NNW5 1121 aaKnown RBP4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 ENAMQ9NRM1 1142 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 MTMR4Q9NYA4 1195 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 KLK13Q9UKR3 277 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 AP4E1Q9UPM8 1137 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 IRAK3Q9Y616 596 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 CDY2AQ9Y6F7 541 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 SQORQ9Y6N5 450 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 NUMBLQ9Y6R0 609 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 CACNA1DQ01668 2161 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 ZNF532Q9HCE3 1301 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 CELSR3Q9NYQ7 3312 aa4.65□□□□□ -1.67
ECHDC1-211ENST00000460558 POLQO75417 2590 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 MYH9P35579 1960 aaKnown RBP4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 NOTCH4Q99466 2003 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 hCG_2014768A0A024R1R8 64 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 IGKV6D-41A0A0C4DH26 115 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 C4orf47A7E2U8 309 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 M0QZ92 97 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 PIK3R2O00459 728 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 PRKAB2O43741 272 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 EPN2O95208 641 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 MBD4O95243 580 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 ASMTLO95671 621 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 LGALS2P05162 132 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 NAT2P11245 290 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 MCCP23508 829 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 ADAM17P78536 824 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 MRPS6P82932 125 aaKnown RBP4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 AMPD3Q01432 767 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 SCAPQ12770 1279 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 SRSF5Q13243 272 aaKnown RBP4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 MTX1Q13505 466 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 TM4SF20Q53R12 229 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 CELF3Q5SZQ8 465 aaKnown RBP4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 AXDND1Q5T1B0 1012 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 FAM102BQ5T8I3 360 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 FOXB2Q5VYV0 432 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 RCSD1Q6JBY9 416 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 KCNV1Q6PIU1 500 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 ZNF852Q6ZMS4 543 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 TPRG1Q6ZUI0 275 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 KCTD1Q719H9 257 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 ARMCX6Q7L4S7 300 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 LONP2Q86WA8 852 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 WDR63Q8IWG1 891 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 SMYD4Q8IYR2 804 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 ZNF444Q8N0Y2 327 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 LRRC43Q8N309 656 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 ZNF843Q8N446 348 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 LSM14AQ8ND56 463 aaKnown RBP4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 CMASQ8NFW8 434 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 BAHD1Q8TBE0 780 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 FEZF2Q8TBJ5 459 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 CLEC4DQ8WXI8 215 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 EZH1Q92800 747 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 CHMP4CQ96CF2 233 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 TMEM169Q96HH4 297 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 EXOC2Q96KP1 924 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 IWS1Q96ST2 819 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 DPH2Q9BQC3 489 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 RHOBTB2Q9BYZ6 727 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 RANBP17Q9H2T7 1088 aaKnown RBP4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 ZNF287Q9HBT7 754 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 VPS45Q9NRW7 570 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 C1orf112Q9NSG2 853 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 ARPP21Q9UBL0 812 aaPredicted RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms