RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 DNAJB4Q9UDY4 337 aa11.82□□□□□ -0.52
SMNDC1-203ENST00000460483 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.82□□□□□ -0.523e-7■□□□□ 9.4
SMNDC1-203ENST00000460483 SNX9Q9Y5X1 595 aa11.82□□□□□ -0.52
SMNDC1-203ENST00000460483 A0A1B0GTH6 734 aa11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 GRXCR1A8MXD5 290 aa11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 H3BNC9 293 aa11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 MEFVO15553 781 aaPredicted RBP11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 TACC1O75410 805 aa11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 SLC34A2O95436 690 aa11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 SOD2P04179 222 aa11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 ATP1A3P13637 1013 aa11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 PBX2P40425 430 aa11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 AARSP49588 968 aaKnown RBP eCLIP11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 MYL6P60660 151 aa11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 NOP14P78316 857 aaKnown RBP11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 YWHAHQ04917 246 aaPredicted RBP11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 SOX4Q06945 474 aaPredicted RBP11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 SMARCB1Q12824 385 aa11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 MAPRE1Q15691 268 aaKnown RBP11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 TSR1Q2NL82 804 aaKnown RBP11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 CBWD6Q4V339 395 aa11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 CBWD3Q5JTY5 395 aa11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 CBWD5Q5RIA9 395 aa11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 ZNF697Q5TEC3 545 aa11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 FAM171A1Q5VUB5 890 aa11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 ZNF280DQ6N043 979 aa11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 NEK11Q8NG66 645 aa11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 PLEKHO2Q8TD55 490 aa11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 MICAL1Q8TDZ2 1067 aa11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 SENP8Q96LD8 212 aa11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 ERGIC2Q96RQ1 377 aa11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 EDEM3Q9BZQ6 932 aa11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 INTS2Q9H0H0 1204 aaKnown RBP11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 NUCKS1Q9H1E3 243 aaKnown RBP11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 NKX2-4Q9H2Z4 354 aa11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 SNX25Q9H3E2 840 aa11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 GOLGA2P5Q9HBQ8 144 aa11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 PLCB1Q9NQ66 1216 aa11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 RTN4Q9NQC3 1192 aaKnown RBP11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 NXF1Q9UBU9 619 aaKnown RBP11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 APEX2Q9UBZ4 518 aa11.81□□□□□ -0.52
SMNDC1-203ENST00000460483 M0QZQ0 153 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 C1RP00736 705 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 CST3P01034 146 aaPredicted RBP11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 CYP11A1P05108 521 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 GLUD2P49448 558 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 BPIFB4P59827 614 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 TSPY1Q01534 308 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 GPM6BQ13491 265 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 TRIM14Q14142 442 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 SMC1AQ14683 1233 aaKnown RBP11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 NR1I3Q14994 352 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 MIIPQ5JXC2 388 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 C1orf220Q5T0J3 134 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 FAM109BQ6ICB4 259 aaPredicted RBP11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 CACNA2D4Q7Z3S7 1137 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 TMC7Q7Z402 723 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 PPFIBP1Q86W92 1011 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 UNC93AQ86WB7 457 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 VPS52Q8N1B4 723 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 PPM1KQ8N3J5 372 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 KLHL23Q8NBE8 558 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 RBSNQ9H1K0 784 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 ZNF576Q9H609 170 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 ENTPD7Q9NQZ7 604 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 TLR9Q9NR96 1032 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 LMCD1Q9NZU5 365 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 SIX4Q9UIU6 781 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 FBXL5Q9UKA1 691 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 KIAA1257Q9ULG3 409 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 MAFFQ9ULX9 164 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 PTPRJQ12913 1337 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 ALPK3Q96L96 1907 aa11.8□□□□□ -0.52
SMNDC1-203ENST00000460483 LCHNA4D1U4 455 aa11.79□□□□□ -0.52
SMNDC1-203ENST00000460483 OR6C75A6NL08 312 aa11.79□□□□□ -0.52
SMNDC1-203ENST00000460483 NT5C1B-RDH14C9J2C7 533 aa11.79□□□□□ -0.52
SMNDC1-203ENST00000460483 SRGAP2BP0DMP2 458 aa11.79□□□□□ -0.52
SMNDC1-203ENST00000460483 FGFR3P22607 806 aa11.79□□□□□ -0.52
SMNDC1-203ENST00000460483 PON1P27169 355 aa11.79□□□□□ -0.52
SMNDC1-203ENST00000460483 MRE11P49959 708 aa11.79□□□□□ -0.52
SMNDC1-203ENST00000460483 WNT7BP56706 349 aa11.79□□□□□ -0.52
SMNDC1-203ENST00000460483 CUL2Q13617 745 aa11.79□□□□□ -0.52
SMNDC1-203ENST00000460483 TIGD5Q53EQ6 642 aa11.79□□□□□ -0.52
SMNDC1-203ENST00000460483 OVOS1Q6IE37 1185 aa11.79□□□□□ -0.52
SMNDC1-203ENST00000460483 TRIM65Q6PJ69 517 aa11.79□□□□□ -0.52
SMNDC1-203ENST00000460483 CEP57Q86XR8 500 aa11.79□□□□□ -0.52
SMNDC1-203ENST00000460483 DCP1BQ8IZD4 617 aaKnown RBP11.79□□□□□ -0.52
SMNDC1-203ENST00000460483 ARNTL2Q8WYA1 636 aa11.79□□□□□ -0.52
SMNDC1-203ENST00000460483 SPAG5Q96R06 1193 aa11.79□□□□□ -0.52
SMNDC1-203ENST00000460483 HERC2P3Q9BVR0 1158 aa11.79□□□□□ -0.52
SMNDC1-203ENST00000460483 XYLT2Q9H1B5 865 aa11.79□□□□□ -0.52
SMNDC1-203ENST00000460483 HSD3B7Q9H2F3 369 aa11.79□□□□□ -0.52
SMNDC1-203ENST00000460483 IFNKQ9P0W0 207 aa11.79□□□□□ -0.52
SMNDC1-203ENST00000460483 MTUS1Q9ULD2 1270 aa11.79□□□□□ -0.52
SMNDC1-203ENST00000460483 YBX2Q9Y2T7 364 aaKnown RBP11.79□□□□□ -0.52
SMNDC1-203ENST00000460483 BACE2Q9Y5Z0 518 aa11.79□□□□□ -0.52
SMNDC1-203ENST00000460483 TTC3P53804 2025 aa11.79□□□□□ -0.52
SMNDC1-203ENST00000460483 A8MXQ7 604 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 OAZ2O95190 189 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 VNN1O95497 513 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms