RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 IWS1Q96ST2 819 aa9□□□□□ -0.97
VPS50-208ENST00000458707 TIPINQ9BVW5 301 aa9□□□□□ -0.97
VPS50-208ENST00000458707 ZC3H12CQ9C0D7 883 aaKnown RBP9□□□□□ -0.97
VPS50-208ENST00000458707 CYLDQ9NQC7 956 aa9□□□□□ -0.97
VPS50-208ENST00000458707 DNAJC17Q9NVM6 304 aaKnown RBP9□□□□□ -0.97
VPS50-208ENST00000458707 SMG5Q9UPR3 1016 aaKnown RBP9□□□□□ -0.97
VPS50-208ENST00000458707 NFASCO94856 1347 aa9□□□□□ -0.97
VPS50-208ENST00000458707 A0A1W2PRG0 241 aa9□□□□□ -0.97
VPS50-208ENST00000458707 RBM47A0AV96 593 aaKnown RBP9□□□□□ -0.97
VPS50-208ENST00000458707 IPO5O00410 1097 aaKnown RBP9□□□□□ -0.97
VPS50-208ENST00000458707 ZSCAN9O15535 394 aaPredicted RBP9□□□□□ -0.97
VPS50-208ENST00000458707 LYPLA2O95372 231 aa9□□□□□ -0.97
VPS50-208ENST00000458707 OATP04181 439 aa9□□□□□ -0.97
VPS50-208ENST00000458707 ALDH3A1P30838 453 aa9□□□□□ -0.97
VPS50-208ENST00000458707 GTF2H1P32780 548 aa9□□□□□ -0.97
VPS50-208ENST00000458707 GCKP35557 465 aa9□□□□□ -0.97
VPS50-208ENST00000458707 RARRES1P49788 294 aa9□□□□□ -0.97
VPS50-208ENST00000458707 RASSF2P50749 326 aa9□□□□□ -0.97
VPS50-208ENST00000458707 RAB27AP51159 221 aa9□□□□□ -0.97
VPS50-208ENST00000458707 TCP10Q12799 353 aa9□□□□□ -0.97
VPS50-208ENST00000458707 SPARCL1Q14515 664 aa9□□□□□ -0.97
VPS50-208ENST00000458707 TNIP1Q15025 636 aa9□□□□□ -0.97
VPS50-208ENST00000458707 TMED2Q15363 201 aa9□□□□□ -0.97
VPS50-208ENST00000458707 SNRNP35Q16560 246 aaKnown RBP9□□□□□ -0.97
VPS50-208ENST00000458707 HHATQ5VTY9 493 aa9□□□□□ -0.97
VPS50-208ENST00000458707 FAM47EQ6ZV65 393 aa9□□□□□ -0.97
VPS50-208ENST00000458707 ZNF365Q70YC5 407 aa9□□□□□ -0.97
VPS50-208ENST00000458707 ENOSF1Q7L5Y1 443 aa9□□□□□ -0.97
VPS50-208ENST00000458707 VSIG1Q86XK7 387 aa9□□□□□ -0.97
VPS50-208ENST00000458707 ZNF677Q86XU0 584 aa9□□□□□ -0.97
VPS50-208ENST00000458707 KIAA0825Q8IV33 1275 aa9□□□□□ -0.97
VPS50-208ENST00000458707 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9□□□□□ -0.97
VPS50-208ENST00000458707 KATNAL2Q8IYT4 538 aa9□□□□□ -0.97
VPS50-208ENST00000458707 OGFOD1Q8N543 542 aa9□□□□□ -0.97
VPS50-208ENST00000458707 LSM14AQ8ND56 463 aaKnown RBP9□□□□□ -0.97
VPS50-208ENST00000458707 SLC17A8Q8NDX2 589 aa9□□□□□ -0.97
VPS50-208ENST00000458707 FBXL13Q8NEE6 735 aa9□□□□□ -0.97
VPS50-208ENST00000458707 ZNF398Q8TD17 642 aa9□□□□□ -0.97
VPS50-208ENST00000458707 PARD3BQ8TEW8 1205 aa9□□□□□ -0.97
VPS50-208ENST00000458707 SAAL1Q96ER3 474 aa9□□□□□ -0.97
VPS50-208ENST00000458707 C9orf72Q96LT7 481 aa9□□□□□ -0.97
VPS50-208ENST00000458707 PWWP2AQ96N64 755 aa9□□□□□ -0.97
VPS50-208ENST00000458707 NT5C1BQ96P26 610 aa9□□□□□ -0.97
VPS50-208ENST00000458707 ARPC5LQ9BPX5 153 aa9□□□□□ -0.97
VPS50-208ENST00000458707 DEFB129Q9H1M3 183 aa9□□□□□ -0.97
VPS50-208ENST00000458707 PPCSQ9HAB8 311 aa9□□□□□ -0.97
VPS50-208ENST00000458707 SPON1Q9HCB6 807 aa9□□□□□ -0.97
VPS50-208ENST00000458707 KIAA1586Q9HCI6 787 aa9□□□□□ -0.97
VPS50-208ENST00000458707 SSU72Q9NP77 194 aaKnown RBP9□□□□□ -0.97
VPS50-208ENST00000458707 ZFATQ9P243 1243 aa9□□□□□ -0.97
VPS50-208ENST00000458707 LNPEPQ9UIQ6 1025 aa9□□□□□ -0.97
VPS50-208ENST00000458707 DOCK5Q9H7D0 1870 aa8.99□□□□□ -0.97
VPS50-208ENST00000458707 MYPNQ86TC9 1320 aa8.99□□□□□ -0.97
VPS50-208ENST00000458707 TBC1D12O60347 775 aa8.99□□□□□ -0.97
VPS50-208ENST00000458707 HNRNPCL1O60812 293 aaKnown RBP8.99□□□□□ -0.97
VPS50-208ENST00000458707 ZC3H11AO75152 810 aaKnown RBP eCLIP8.99□□□□□ -0.97
VPS50-208ENST00000458707 PROSCO94903 275 aa8.99□□□□□ -0.97
VPS50-208ENST00000458707 GDF11O95390 407 aa8.99□□□□□ -0.97
VPS50-208ENST00000458707 P4HBP07237 508 aaKnown RBP8.99□□□□□ -0.97
VPS50-208ENST00000458707 LINGO3P0C6S8 592 aa8.99□□□□□ -0.97
VPS50-208ENST00000458707 FDX1P10109 184 aa8.99□□□□□ -0.97
VPS50-208ENST00000458707 RALAP11233 206 aa8.99□□□□□ -0.97
VPS50-208ENST00000458707 GM2AP17900 193 aa8.99□□□□□ -0.97
VPS50-208ENST00000458707 ATP6V1C1P21283 382 aa8.99□□□□□ -0.97
VPS50-208ENST00000458707 TARSP26639 723 aaKnown RBP8.99□□□□□ -0.97
VPS50-208ENST00000458707 CACNB3P54284 484 aa8.99□□□□□ -0.97
VPS50-208ENST00000458707 FKBP1AP62942 108 aaKnown RBP8.99□□□□□ -0.97
VPS50-208ENST00000458707 JAG1P78504 1218 aa8.99□□□□□ -0.97
VPS50-208ENST00000458707 GCNT1Q02742 428 aa8.99□□□□□ -0.97
VPS50-208ENST00000458707 DNAJC3Q13217 504 aa8.99□□□□□ -0.97
VPS50-208ENST00000458707 LLGL1Q15334 1064 aa8.99□□□□□ -0.97
VPS50-208ENST00000458707 SLC45A4Q5BKX6 768 aa8.99□□□□□ -0.97
VPS50-208ENST00000458707 ANO7Q6IWH7 933 aa8.99□□□□□ -0.97
VPS50-208ENST00000458707 DRICH1Q6PGQ1 229 aaPredicted RBP8.99□□□□□ -0.97
VPS50-208ENST00000458707 ASAP3Q8TDY4 903 aa8.99□□□□□ -0.97
VPS50-208ENST00000458707 MFSD14AQ96MC6 490 aa8.99□□□□□ -0.97
VPS50-208ENST00000458707 FBXL18Q96ME1 805 aa8.99□□□□□ -0.97
VPS50-208ENST00000458707 RBM15Q96T37 977 aaKnown RBP eCLIP8.99□□□□□ -0.97
VPS50-208ENST00000458707 MXRA8Q9BRK3 442 aa8.99□□□□□ -0.97
VPS50-208ENST00000458707 TBC1D10AQ9BXI6 508 aa8.99□□□□□ -0.97
VPS50-208ENST00000458707 KIAA1683Q9H0B3 1180 aa8.99□□□□□ -0.97
VPS50-208ENST00000458707 TRABDQ9H4I3 376 aa8.99□□□□□ -0.97
VPS50-208ENST00000458707 SAR1AQ9NR31 198 aa8.99□□□□□ -0.97
VPS50-208ENST00000458707 HAO1Q9UJM8 370 aa8.99□□□□□ -0.97
VPS50-208ENST00000458707 GRID1Q9ULK0 1009 aa8.99□□□□□ -0.97
VPS50-208ENST00000458707 ZHX2Q9Y6X8 837 aa8.99□□□□□ -0.97
VPS50-208ENST00000458707 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.98□□□□□ -0.97
VPS50-208ENST00000458707 EXOC1LA0A1B0GW35 172 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 C2CD2LO14523 706 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 DNALI1O14645 258 aaPredicted RBP8.98□□□□□ -0.97
VPS50-208ENST00000458707 DHX15O43143 795 aaKnown RBP8.98□□□□□ -0.97
VPS50-208ENST00000458707 TPD52L2O43399 206 aaKnown RBP8.98□□□□□ -0.97
VPS50-208ENST00000458707 TYROBPO43914 113 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 ZBED4O75132 1171 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 CYP1A1P04798 512 aaPredicted RBP8.98□□□□□ -0.97
VPS50-208ENST00000458707 ACADSP16219 412 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 PAX3P23760 479 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 CDC25CP30307 473 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 PEX19P40855 299 aa8.98□□□□□ -0.97
VPS50-208ENST00000458707 PSEN2P49810 448 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms