RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 SEPHS1P49903 392 aa12.52□□□□□ -0.41
SYNE2-207ENST00000458046 MAPK7Q13164 816 aa12.52□□□□□ -0.41
SYNE2-207ENST00000458046 NCOA4Q13772 614 aa12.52□□□□□ -0.41
SYNE2-207ENST00000458046 MESDQ14696 234 aa12.52□□□□□ -0.41
SYNE2-207ENST00000458046 LLGL1Q15334 1064 aa12.52□□□□□ -0.41
SYNE2-207ENST00000458046 SWI5Q1ZZU3 235 aa12.52□□□□□ -0.41
SYNE2-207ENST00000458046 DUPD1Q68J44 220 aa12.52□□□□□ -0.41
SYNE2-207ENST00000458046 C1orf228Q6PIY5 440 aa12.52□□□□□ -0.41
SYNE2-207ENST00000458046 PADI6Q6TGC4 694 aa12.52□□□□□ -0.41
SYNE2-207ENST00000458046 TBC1D1Q86TI0 1168 aaPredicted RBP12.52□□□□□ -0.41
SYNE2-207ENST00000458046 SPATS2Q86XZ4 545 aaKnown RBP12.52□□□□□ -0.41
SYNE2-207ENST00000458046 C17orf50Q8WW18 174 aa12.52□□□□□ -0.41
SYNE2-207ENST00000458046 KIF12Q96FN5 646 aa12.52□□□□□ -0.41
SYNE2-207ENST00000458046 CBWD1Q9BRT8 395 aa12.52□□□□□ -0.41
SYNE2-207ENST00000458046 DDX20Q9UHI6 824 aaKnown RBP12.52□□□□□ -0.41
SYNE2-207ENST00000458046 ATP8B3O60423 1300 aa12.52□□□□□ -0.41
SYNE2-207ENST00000458046 PHF20L1A8MW92 1017 aa12.52□□□□□ -0.41
SYNE2-207ENST00000458046 ATMINO43313 823 aaPredicted RBP12.52□□□□□ -0.41
SYNE2-207ENST00000458046 TRAPPC3O43617 180 aa12.52□□□□□ -0.41
SYNE2-207ENST00000458046 BCRP11274 1271 aa12.52□□□□□ -0.41
SYNE2-207ENST00000458046 CAP2P40123 477 aa12.52□□□□□ -0.41
SYNE2-207ENST00000458046 KIF22Q14807 665 aa12.52□□□□□ -0.41
SYNE2-207ENST00000458046 AGBL2Q5U5Z8 902 aa12.52□□□□□ -0.41
SYNE2-207ENST00000458046 CPNE8Q86YQ8 564 aa12.52□□□□□ -0.41
SYNE2-207ENST00000458046 FAM26EQ8N5C1 309 aa12.52□□□□□ -0.41
SYNE2-207ENST00000458046 FBXO25Q8TCJ0 367 aa12.52□□□□□ -0.41
SYNE2-207ENST00000458046 ASIC4Q96FT7 647 aa12.52□□□□□ -0.41
SYNE2-207ENST00000458046 C1orf74Q96LT6 269 aa12.52□□□□□ -0.41
SYNE2-207ENST00000458046 TEKT3Q9BXF9 490 aa12.52□□□□□ -0.41
SYNE2-207ENST00000458046 IQCA1LA6NCM1 817 aa12.51□□□□□ -0.41
SYNE2-207ENST00000458046 VCAM1P19320 739 aa12.51□□□□□ -0.41
SYNE2-207ENST00000458046 UBAP2Q5T6F2 1119 aaKnown RBP12.51□□□□□ -0.41
SYNE2-207ENST00000458046 CARNMT1Q8N4J0 409 aa12.51□□□□□ -0.41
SYNE2-207ENST00000458046 TEX9Q8N6V9 391 aa12.51□□□□□ -0.41
SYNE2-207ENST00000458046 ELMO3Q96BJ8 720 aa12.51□□□□□ -0.41
SYNE2-207ENST00000458046 BTBD6Q96KE9 485 aa12.51□□□□□ -0.41
SYNE2-207ENST00000458046 NAP1L3Q99457 506 aaPredicted RBP12.51□□□□□ -0.41
SYNE2-207ENST00000458046 WDR11Q9BZH6 1224 aa12.51□□□□□ -0.41
SYNE2-207ENST00000458046 TSPYL2Q9H2G4 693 aaPredicted RBP12.51□□□□□ -0.41
SYNE2-207ENST00000458046 PRDM6Q9NQX0 595 aa12.51□□□□□ -0.41
SYNE2-207ENST00000458046 ZDHHC18Q9NUE0 388 aa12.51□□□□□ -0.41
SYNE2-207ENST00000458046 TMEM150BA6NC51 233 aa12.51□□□□□ -0.41
SYNE2-207ENST00000458046 GOLGA8IPA6NC78 632 aa12.51□□□□□ -0.41
SYNE2-207ENST00000458046 GOLGA8JA6NMD2 632 aa12.51□□□□□ -0.41
SYNE2-207ENST00000458046 PPFIA2O75334 1257 aa12.51□□□□□ -0.41
SYNE2-207ENST00000458046 SGPL1O95470 568 aa12.51□□□□□ -0.41
SYNE2-207ENST00000458046 KRT20P35900 424 aa12.51□□□□□ -0.41
SYNE2-207ENST00000458046 VAMP7P51809 220 aa12.51□□□□□ -0.41
SYNE2-207ENST00000458046 GABREP78334 506 aa12.51□□□□□ -0.41
SYNE2-207ENST00000458046 NSUN2Q08J23 767 aaKnown RBP eCLIP12.51□□□□□ -0.41
SYNE2-207ENST00000458046 NXNQ6DKJ4 435 aa12.51□□□□□ -0.41
SYNE2-207ENST00000458046 TMEM151BQ8IW70 566 aa12.51□□□□□ -0.41
SYNE2-207ENST00000458046 ZDHHC14Q8IZN3 488 aa12.51□□□□□ -0.41
SYNE2-207ENST00000458046 FLAD1Q8NFF5 587 aa12.51□□□□□ -0.41
SYNE2-207ENST00000458046 OR8H1Q8NGG4 311 aa12.51□□□□□ -0.41
SYNE2-207ENST00000458046 RBM18Q96H35 190 aaKnown RBP12.51□□□□□ -0.41
SYNE2-207ENST00000458046 ANKEF1Q9NU02 776 aa12.51□□□□□ -0.41
SYNE2-207ENST00000458046 ZNF112Q9UJU3 913 aa12.51□□□□□ -0.41
SYNE2-207ENST00000458046 GPR182O15218 404 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 TMCC2O75069 709 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 ENTPD3O75355 529 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 ITGB5P18084 799 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 PMS2P54278 862 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 MIGA2Q7L4E1 593 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 PCDHB18PQ96TA0 734 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 ELAC2Q9BQ52 826 aaKnown RBP12.5□□□□□ -0.41
SYNE2-207ENST00000458046 RHOBTB2Q9BYZ6 727 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 TXLNGYQ9BZA5 131 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 EPB41L4BQ9H329 900 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 C6orf203Q9P0P8 240 aaPredicted RBP12.5□□□□□ -0.41
SYNE2-207ENST00000458046 MRPL11Q9Y3B7 192 aaKnown RBP12.5□□□□□ -0.41
SYNE2-207ENST00000458046 TCRBV7S2A1N4TA0A589 114 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 ALG1L2C9J202 215 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 KIAA0391O15091 583 aaKnown RBP12.5□□□□□ -0.41
SYNE2-207ENST00000458046 ATP2C2O75185 946 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 FSBPO95073 299 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 COMTP21964 271 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 CHRNA5P30532 468 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 MNAT1P51948 309 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 GPC5P78333 572 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 EIF2B5Q13144 721 aaKnown RBP12.5□□□□□ -0.41
SYNE2-207ENST00000458046 SLC29A2Q14542 456 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 C6orf89Q6UWU4 347 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 ZDHHC24Q6UX98 284 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 LHFPL2Q6ZUX7 228 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 MIER3Q7Z3K6 550 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 CPLX4Q7Z7G2 160 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 LDHDQ86WU2 507 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 CDAN1Q8IWY9 1227 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 RHOT2Q8IXI1 618 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 PRELID2Q8N945 189 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 PLEKHO2Q8TD55 490 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 TRIM11Q96F44 468 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 SEC16BQ96JE7 1060 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 CABS1Q96KC9 395 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 FAM81BQ96LP2 452 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 STRA6Q9BX79 667 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 PTPN22Q9Y2R2 807 aa12.5□□□□□ -0.41
SYNE2-207ENST00000458046 UBE4BO95155 1302 aa12.49□□□□□ -0.41
SYNE2-207ENST00000458046 ASMTLO95671 621 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms