RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 HEMGNQ9BXL5 484 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 ZNF341Q9BYN7 854 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 TRIM55Q9BYV6 548 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 FRMD8Q9BZ67 464 aaPredicted RBP3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 MAF1Q9H063 256 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 MIS12Q9H081 205 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 POLR3FQ9H1D9 316 aaPredicted RBP3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 LRMDAQ9H2I8 198 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 IKZF4Q9H2S9 585 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 VCXQ9H320 206 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 BCAS3Q9H6U6 928 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 AS3MTQ9HBK9 375 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 PCDH9Q9HC56 1237 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 MLXIPLQ9NP71 852 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 SAR1AQ9NR31 198 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 ARHGEF3Q9NR81 526 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 AAASQ9NRG9 546 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 TOPORSQ9NS56 1045 aaPredicted RBP3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 CHST7Q9NS84 486 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 DNAJC17Q9NVM6 304 aaKnown RBP3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 ANKFY1Q9P2R3 1169 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 WRAP73Q9P2S5 460 aaPredicted RBP3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 ZNF219Q9P2Y4 722 aaPredicted RBP3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 STOML1Q9UBI4 398 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 GABBR1Q9UBS5 961 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 PRKAG3Q9UGI9 489 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 FETUBQ9UGM5 382 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 TBK1Q9UHD2 729 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 SEPT9Q9UHD8 586 aaPredicted RBP3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 ZFP69BQ9UJL9 534 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 AGO2Q9UKV8 859 aaKnown RBP3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 PHTF1Q9UMS5 762 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 NAALADL1Q9UQQ1 740 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 BCS1LQ9Y276 419 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 DRG1Q9Y295 367 aaKnown RBP3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 NEU2Q9Y3R4 380 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 UMODL1Q5DID0 1318 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 MYPNQ86TC9 1320 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 CLRN2A0PK11 232 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 FAM170AA1A519 330 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 LRRD1A4D1F6 860 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 CFAP69A5D8W1 941 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 LRRIQ4A6NIV6 560 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 TISP43B9A030 160 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 NFIBO00712 420 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 C2CD2LO14523 706 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 KIF3CO14782 793 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 CLGNO14967 610 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 MCF2LO15068 1137 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 ALOX15BO15296 676 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 DHX15O43143 795 aaKnown RBP3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 ONECUT3O60422 494 aaPredicted RBP3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 CCDC22O60826 627 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 EDF1O60869 148 aaKnown RBP3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 SPAG7O75391 227 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 NEBLO76041 1014 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 ASMTLO95671 621 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 IFNB1P01574 187 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 TNNC2P02585 160 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 MT-ND3P03897 115 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 ATP5BP06576 529 aaKnown RBP3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 ITGAVP06756 1048 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 INHBAP08476 426 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 KRT16P08779 473 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 SKIP12755 728 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 P4HA1P13674 534 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 PECAM1P16284 738 aaPredicted RBP3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 CD58P19256 250 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 TAC1P20366 129 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 KLRC2P26717 231 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 MARK3P27448 753 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 POLD1P28340 1107 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 PTPN4P29074 926 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 ADSSP30520 456 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 GCKP35557 465 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 PCK1P35558 622 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 RFC5P40937 340 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 NAMPTP43490 491 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 CCNG1P51959 295 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 EFNA5P52803 228 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 ARFIP2P53365 341 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 YARSP54577 528 aaKnown RBP3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 RAD23BP54727 409 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 SH3BGRP55822 239 aaPredicted RBP3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 MRPS35P82673 323 aaKnown RBP3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 PRKCEQ02156 737 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 SF3A3Q12874 501 aaKnown RBP eCLIP3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 PDIA2Q13087 525 aaKnown RBP3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 GRM1Q13255 1194 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 KLF1Q13351 362 aaPredicted RBP3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 MAMLD1Q13495 774 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 TRPC3Q13507 836 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 TFDP2Q14188 446 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 EMC2Q15006 297 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 TBCCQ15814 346 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 TMEM132AQ24JP5 1023 aa3.51□□□□□ -1.85
HMGN1P18-201ENST00000457642 SPRED3Q2MJR0 410 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms