RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 MRPL4Q9BYD3 311 aaKnown RBP21.3■■□□□ 1
CSPG5-203ENST00000456150 CCDC113Q9H0I3 377 aa21.3■■□□□ 1
CSPG5-203ENST00000456150 USTQ9Y2C2 406 aa21.3■■□□□ 1
CSPG5-203ENST00000456150 A0A0G2JMZ2 1700 aa21.29■■□□□ 1
CSPG5-203ENST00000456150 ASAP2O43150 1006 aa21.29■■□□□ 1
CSPG5-203ENST00000456150 LSM8O95777 96 aaKnown RBP21.29■■□□□ 1
CSPG5-203ENST00000456150 ASS1P00966 412 aaKnown RBP21.29■■□□□ 1
CSPG5-203ENST00000456150 MMP8P22894 467 aa21.29■■□□□ 1
CSPG5-203ENST00000456150 MKRN4PQ13434 485 aaPredicted RBP21.29■■□□□ 1
CSPG5-203ENST00000456150 TRIP13Q15645 432 aaPredicted RBP21.29■■□□□ 1
CSPG5-203ENST00000456150 DAB2IPQ5VWQ8 1189 aa21.29■■□□□ 1
CSPG5-203ENST00000456150 LBX2Q6XYB7 198 aa21.29■■□□□ 1
CSPG5-203ENST00000456150 IPO4Q8TEX9 1081 aaKnown RBP21.29■■□□□ 1
CSPG5-203ENST00000456150 RBM41Q96IZ5 413 aaKnown RBP21.29■■□□□ 1
CSPG5-203ENST00000456150 NEU2Q9Y3R4 380 aa21.29■■□□□ 1
CSPG5-203ENST00000456150 EDNRBP24530 442 aa21.28■■□□□ 1
CSPG5-203ENST00000456150 LONRF1Q17RB8 773 aa21.28■■□□□ 1
CSPG5-203ENST00000456150 RIOX2Q8IUF8 465 aa21.28■■□□□ 1
CSPG5-203ENST00000456150 RCOR2Q8IZ40 523 aa21.28■■□□□ 1
CSPG5-203ENST00000456150 ANKS4BQ8N8V4 417 aa21.28■■□□□ 1
CSPG5-203ENST00000456150 CCDC197Q8NCU1 140 aa21.28■■□□□ 1
CSPG5-203ENST00000456150 NSRP1Q9H0G5 558 aaKnown RBP21.28■■□□□ 1
CSPG5-203ENST00000456150 O00370 1275 aa21.28■■□□□ 1
CSPG5-203ENST00000456150 TOM1L1O75674 476 aa21.28■■□□□ 1
CSPG5-203ENST00000456150 TCEA3O75764 348 aa21.28■■□□□ 1
CSPG5-203ENST00000456150 SSTR3P32745 418 aaPredicted RBP21.28■■□□□ 1
CSPG5-203ENST00000456150 GJC1P36383 396 aa21.28■■□□□ 1
CSPG5-203ENST00000456150 SURF1Q15526 300 aa21.28■■□□□ 1
CSPG5-203ENST00000456150 SMYD5Q6GMV2 418 aa21.28■■□□□ 1
CSPG5-203ENST00000456150 CCHCR1Q8TD31 782 aa21.28■■□□□ 1
CSPG5-203ENST00000456150 SEPT1Q8WYJ6 367 aa21.28■■□□□ 1
CSPG5-203ENST00000456150 CLMNQ96JQ2 1002 aa21.28■■□□□ 1
CSPG5-203ENST00000456150 FOXP3Q9BZS1 431 aa21.28■■□□□ 1
CSPG5-203ENST00000456150 PTPRFP10586 1907 aa21.28■■□□□ 1
CSPG5-203ENST00000456150 GAS2O43903 313 aaKnown RBP21.27■■□□□ 1
CSPG5-203ENST00000456150 TGFB3P10600 412 aa21.27■■□□□ 1
CSPG5-203ENST00000456150 CD58P19256 250 aa21.27■■□□□ 1
CSPG5-203ENST00000456150 CNGA2Q16280 664 aa21.27■■□□□ 1
CSPG5-203ENST00000456150 SEZ6Q53EL9 994 aa21.27■■□□□ 1
CSPG5-203ENST00000456150 IER5Q5VY09 327 aa21.27■■□□□ 1
CSPG5-203ENST00000456150 FBXW10Q5XX13 1052 aa21.27■■□□□ 1
CSPG5-203ENST00000456150 EXOC3L1Q86VI1 746 aa21.27■■□□□ 1
CSPG5-203ENST00000456150 CCDC13Q8IYE1 715 aa21.27■■□□□ 1
CSPG5-203ENST00000456150 TCP11Q8WWU5 503 aa21.27■■□□□ 1
CSPG5-203ENST00000456150 PRMT1Q99873 361 aaKnown RBP21.27■■□□□ 1
CSPG5-203ENST00000456150 TCHPQ9BT92 498 aa21.27■■□□□ 1
CSPG5-203ENST00000456150 NFX1Q12986 1120 aaKnown RBP21.27■□□□□ 0.99
CSPG5-203ENST00000456150 LACTB2Q53H82 288 aaPredicted RBP21.27■□□□□ 0.99
CSPG5-203ENST00000456150 RELL1Q8IUW5 271 aa21.27■□□□□ 0.99
CSPG5-203ENST00000456150 EXOC8Q8IYI6 725 aa21.27■□□□□ 0.99
CSPG5-203ENST00000456150 PRPF31Q8WWY3 499 aaKnown RBP21.27■□□□□ 0.99
CSPG5-203ENST00000456150 ARHGEF2Q92974 986 aaKnown RBP21.27■□□□□ 0.99
CSPG5-203ENST00000456150 OSBPL7Q9BZF2 842 aa21.27■□□□□ 0.99
CSPG5-203ENST00000456150 ZNF518BQ9C0D4 1074 aa21.27■□□□□ 0.99
CSPG5-203ENST00000456150 SAMD15Q9P1V8 674 aa21.27■□□□□ 0.99
CSPG5-203ENST00000456150 CLEC11AQ9Y240 323 aa21.27■□□□□ 0.99
CSPG5-203ENST00000456150 TMEM191CA6NGB0 347 aa21.26■□□□□ 0.99
CSPG5-203ENST00000456150 OGTO15294 1046 aa21.26■□□□□ 0.99
CSPG5-203ENST00000456150 TMEM191BP0C7N4 346 aa21.26■□□□□ 0.99
CSPG5-203ENST00000456150 TCF7P36402 384 aaPredicted RBP21.26■□□□□ 0.99
CSPG5-203ENST00000456150 VPS41P49754 854 aa21.26■□□□□ 0.99
CSPG5-203ENST00000456150 TAP1Q03518 808 aa21.26■□□□□ 0.99
CSPG5-203ENST00000456150 MCL1Q07820 350 aa21.26■□□□□ 0.99
CSPG5-203ENST00000456150 KYNUQ16719 465 aa21.26■□□□□ 0.99
CSPG5-203ENST00000456150 ANKRD20A8PQ5CZ79 823 aa21.26■□□□□ 0.99
CSPG5-203ENST00000456150 LRRC38Q5VT99 294 aa21.26■□□□□ 0.99
CSPG5-203ENST00000456150 IZUMO3Q5VZ72 239 aa21.26■□□□□ 0.99
CSPG5-203ENST00000456150 MAP1SQ66K74 1059 aaPredicted RBP21.26■□□□□ 0.99
CSPG5-203ENST00000456150 METTL7BQ6UX53 244 aa21.26■□□□□ 0.99
CSPG5-203ENST00000456150 GSTA5Q7RTV2 222 aa21.26■□□□□ 0.99
CSPG5-203ENST00000456150 ZBTB8OSQ8IWT0 167 aa21.26■□□□□ 0.99
CSPG5-203ENST00000456150 TMEM35BQ8NCS4 154 aa21.26■□□□□ 0.99
CSPG5-203ENST00000456150 NIF3L1Q9GZT8 377 aa21.26■□□□□ 0.99
CSPG5-203ENST00000456150 KDM4CQ9H3R0 1056 aa21.26■□□□□ 0.99
CSPG5-203ENST00000456150 ELP3Q9H9T3 547 aa21.26■□□□□ 0.99
CSPG5-203ENST00000456150 NINJ2Q9NZG7 142 aa21.26■□□□□ 0.99
CSPG5-203ENST00000456150 FAM189A1O60320 539 aa21.25■□□□□ 0.99
CSPG5-203ENST00000456150 MSCO60682 206 aa21.25■□□□□ 0.99
CSPG5-203ENST00000456150 TNFSF9P41273 254 aa21.25■□□□□ 0.99
CSPG5-203ENST00000456150 TTLL12Q14166 644 aaPredicted RBP21.25■□□□□ 0.99
CSPG5-203ENST00000456150 MXD4Q14582 209 aaPredicted RBP21.25■□□□□ 0.99
CSPG5-203ENST00000456150 ITIH4Q14624 930 aa21.25■□□□□ 0.99
CSPG5-203ENST00000456150 DUOXA2Q1HG44 320 aa21.25■□□□□ 0.99
CSPG5-203ENST00000456150 SGSM1Q2NKQ1 1148 aa21.25■□□□□ 0.99
CSPG5-203ENST00000456150 CCDC38Q502W7 563 aa21.25■□□□□ 0.99
CSPG5-203ENST00000456150 CDCA2Q69YH5 1023 aaPredicted RBP21.25■□□□□ 0.99
CSPG5-203ENST00000456150 DNAJC24Q6P3W2 148 aa21.25■□□□□ 0.99
CSPG5-203ENST00000456150 ZBTB33Q86T24 672 aa21.25■□□□□ 0.99
CSPG5-203ENST00000456150 PNMA8AQ86V59 439 aaPredicted RBP21.25■□□□□ 0.99
CSPG5-203ENST00000456150 SUGP1Q8IWZ8 645 aaKnown RBP21.25■□□□□ 0.99
CSPG5-203ENST00000456150 CSADQ9Y600 493 aa21.25■□□□□ 0.99
CSPG5-203ENST00000456150 TJP3O95049 919 aa21.25■□□□□ 0.99
CSPG5-203ENST00000456150 CST3P01034 146 aaPredicted RBP21.25■□□□□ 0.99
CSPG5-203ENST00000456150 GHRP10912 638 aa21.25■□□□□ 0.99
CSPG5-203ENST00000456150 IREB2P48200 963 aaKnown RBP21.25■□□□□ 0.99
CSPG5-203ENST00000456150 COPS2P61201 443 aa21.25■□□□□ 0.99
CSPG5-203ENST00000456150 TREML2Q5T2D2 321 aa21.25■□□□□ 0.99
CSPG5-203ENST00000456150 ZFYVE27Q5T4F4 411 aa21.25■□□□□ 0.99
CSPG5-203ENST00000456150 DRICH1Q6PGQ1 229 aaPredicted RBP21.25■□□□□ 0.99
CSPG5-203ENST00000456150 PIGWQ7Z7B1 504 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms