RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 IBSPP21815 317 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 C2CD6Q53TS8 623 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 CACHD1Q5VU97 1274 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 RHPN2Q8IUC4 686 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 KBTBD8Q8NFY9 601 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 TSPAN18Q96SJ8 248 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 C6orf203Q9P0P8 240 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 SLC4A7Q9Y6M7 1214 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 MAGEB2O15479 319 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 ECM2O94769 699 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 TCF3P15923 654 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 EIF5AP63241 154 aaKnown RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 DGUOKQ16854 277 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 BEND6Q5SZJ8 279 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 TTC33Q6PID6 262 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 MOXD1Q6UVY6 613 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 METTL3Q86U44 580 aaKnown RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 FBXL16Q8N461 479 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 XAGE2Q96GT9 111 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 TRIM51Q9BSJ1 452 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 DCLK3Q9C098 648 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 USE1Q9NZ43 259 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 SAP30BPQ9UHR5 308 aaKnown RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 HEATR5AQ86XA9 2040 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 PALLDQ8WX93 1383 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 FER1L6Q2WGJ9 1857 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 PNMA6FA0A0J9YX94 578 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 SYNCRIPO60506 623 aaKnown RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 PDGFRBP09619 1106 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 KRT17Q04695 432 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 SAMD4BQ5PRF9 694 aaKnown RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 DARS2Q6PI48 645 aaKnown RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 STAG2Q8N3U4 1231 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 TTLL11Q8NHH1 800 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 OSBPL6Q9BZF3 934 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 DYRK4Q9NR20 520 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 ANKRD36CQ5JPF3 1778 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 MROH7Q68CQ1 1323 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 VGLL3A8MV65 326 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 COBLO75128 1261 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 PRIM2P49643 509 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 ZNF174Q15697 407 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 ZC3H12BQ5HYM0 836 aaKnown RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 CCDC137Q6PK04 289 aaKnown RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 TAGAPQ8N103 731 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 CYP4Z2PQ8N1L4 340 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 ARHGEF26Q96DR7 871 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 KLF6Q99612 283 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 DSEQ9UL01 958 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 DRG1Q9Y295 367 aaKnown RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 PCDHGA3Q9Y5H0 932 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 SPACA6W5XKT8 324 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 BCORL1Q5H9F3 1711 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 PDIA3P30101 505 aaKnown RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 GEMIN4P57678 1058 aaKnown RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 KRT31Q15323 416 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 C11orf63Q6NUN7 778 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 TRIM65Q6PJ69 517 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 DDX54Q8TDD1 881 aaKnown RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 NGLY1Q96IV0 654 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 ERGIC2Q96RQ1 377 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 TBCBQ99426 244 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 ZBTB1Q9Y2K1 713 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 DEPDC5O75140 1603 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 NFAT5O94916 1531 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 TOM1L1O75674 476 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 OCM2P0CE71 109 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 OCMP0CE72 109 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 CCDC166P0CW27 439 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 PTX3P26022 381 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 NNMTP40261 264 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 ABL2P42684 1182 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 HNRNPH2P55795 449 aaKnown RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 FAM83EQ2M2I3 478 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 E4F1Q66K89 784 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 C19orf18Q8NEA5 215 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 CEP170BQ9Y4F5 1589 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 CPS1P31327 1500 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 PDZK1P1A8MUH7 402 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 IL18RAPO95256 599 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 PPP2R1BP30154 601 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 CYP4A11Q02928 519 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 ITGB3BPQ13352 177 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 CYP4A22Q5TCH4 519 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 MYO1HQ8N1T3 1032 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 MB21D1Q8N884 522 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 SLC26A7Q8TE54 656 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 ULK4Q96C45 1275 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 PRKD2Q9BZL6 878 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 ETAA1Q9NY74 926 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 KLHL3Q9UH77 587 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 VAV3Q9UKW4 847 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 NIP7Q9Y221 180 aaKnown RBP eCLIP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 MATN2O00339 956 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 RGS5O15539 181 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 TRAPPC3O43617 180 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 KRT1P04264 644 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 RBP1P09455 135 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 RRM2P31350 389 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 OXCT1P55809 520 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms