RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 PROS1P07225 676 aa25.33■■□□□ 1.65
PTPRA-208ENST00000455631 PROZP22891 400 aa25.33■■□□□ 1.65
PTPRA-208ENST00000455631 GPR158Q5T848 1215 aa25.33■■□□□ 1.65
PTPRA-208ENST00000455631 PKN3Q6P5Z2 889 aa25.33■■□□□ 1.65
PTPRA-208ENST00000455631 GAREM2Q75VX8 874 aa25.33■■□□□ 1.65
PTPRA-208ENST00000455631 TMEM130Q8N3G9 435 aa25.33■■□□□ 1.65
PTPRA-208ENST00000455631 LSM14BQ9BX40 385 aaKnown RBP25.33■■□□□ 1.65
PTPRA-208ENST00000455631 KMT5AQ9NQR1 393 aa25.33■■□□□ 1.65
PTPRA-208ENST00000455631 ARHGAP28Q9P2N2 729 aa25.33■■□□□ 1.65
PTPRA-208ENST00000455631 ANKFY1Q9P2R3 1169 aa25.33■■□□□ 1.65
PTPRA-208ENST00000455631 OAZ2O95190 189 aa25.32■■□□□ 1.64
PTPRA-208ENST00000455631 MPLP40238 635 aa25.32■■□□□ 1.64
PTPRA-208ENST00000455631 ANKRD1Q15327 319 aa25.32■■□□□ 1.64
PTPRA-208ENST00000455631 ZNF174Q15697 407 aa25.32■■□□□ 1.64
PTPRA-208ENST00000455631 SEZ6Q53EL9 994 aa25.32■■□□□ 1.64
PTPRA-208ENST00000455631 ARHGAP15Q53QZ3 475 aa25.32■■□□□ 1.64
PTPRA-208ENST00000455631 PSAPL1Q6NUJ1 521 aa25.32■■□□□ 1.64
PTPRA-208ENST00000455631 USP37Q86T82 979 aa25.32■■□□□ 1.64
PTPRA-208ENST00000455631 NSUN7Q8NE18 718 aaKnown RBP25.32■■□□□ 1.64
PTPRA-208ENST00000455631 BPIFB1Q8TDL5 484 aa25.32■■□□□ 1.64
PTPRA-208ENST00000455631 GTF3C6Q969F1 213 aa25.32■■□□□ 1.64
PTPRA-208ENST00000455631 OXCT2Q9BYC2 517 aaPredicted RBP25.32■■□□□ 1.64
PTPRA-208ENST00000455631 OBP2AQ9NY56 170 aa25.32■■□□□ 1.64
PTPRA-208ENST00000455631 KIAA1024Q9UPX6 916 aa25.32■■□□□ 1.64
PTPRA-208ENST00000455631 SLC27A5Q9Y2P5 690 aa25.32■■□□□ 1.64
PTPRA-208ENST00000455631 EML5Q05BV3 1969 aa25.31■■□□□ 1.64
PTPRA-208ENST00000455631 M0QZQ0 153 aa25.31■■□□□ 1.64
PTPRA-208ENST00000455631 JAK2O60674 1132 aa25.31■■□□□ 1.64
PTPRA-208ENST00000455631 HIP1RO75146 1068 aa25.31■■□□□ 1.64
PTPRA-208ENST00000455631 LARGE1O95461 756 aa25.31■■□□□ 1.64
PTPRA-208ENST00000455631 PRAMEF12O95522 483 aa25.31■■□□□ 1.64
PTPRA-208ENST00000455631 GABRR2P28476 465 aa25.31■■□□□ 1.64
PTPRA-208ENST00000455631 PLCB2Q00722 1185 aa25.31■■□□□ 1.64
PTPRA-208ENST00000455631 SLC10A6Q3KNW5 377 aa25.31■■□□□ 1.64
PTPRA-208ENST00000455631 PLA2G2CQ5R387 149 aa25.31■■□□□ 1.64
PTPRA-208ENST00000455631 RNF43Q68DV7 783 aa25.31■■□□□ 1.64
PTPRA-208ENST00000455631 ZBTB45Q96K62 511 aaPredicted RBP25.31■■□□□ 1.64
PTPRA-208ENST00000455631 SH2B1Q9NRF2 756 aaPredicted RBP25.31■■□□□ 1.64
PTPRA-208ENST00000455631 DDX19AQ9NUU7 478 aaKnown RBP25.31■■□□□ 1.64
PTPRA-208ENST00000455631 SLC8A2Q9UPR5 921 aa25.31■■□□□ 1.64
PTPRA-208ENST00000455631 PCDHGA5Q9Y5G8 931 aa25.31■■□□□ 1.64
PTPRA-208ENST00000455631 CCDC163A0A0D9SF12 145 aa25.3■■□□□ 1.64
PTPRA-208ENST00000455631 OR6C75A6NL08 312 aa25.3■■□□□ 1.64
PTPRA-208ENST00000455631 FGF19O95750 216 aa25.3■■□□□ 1.64
PTPRA-208ENST00000455631 SPAG1Q07617 926 aa25.3■■□□□ 1.64
PTPRA-208ENST00000455631 GPR17Q13304 367 aa25.3■■□□□ 1.64
PTPRA-208ENST00000455631 NOLC1Q14978 699 aaKnown RBP eCLIP25.3■■□□□ 1.64
PTPRA-208ENST00000455631 ME3Q16798 604 aa25.3■■□□□ 1.64
PTPRA-208ENST00000455631 ITPRIPL2Q3MIP1 535 aa25.3■■□□□ 1.64
PTPRA-208ENST00000455631 DNAJB7Q7Z6W7 309 aaPredicted RBP25.3■■□□□ 1.64
PTPRA-208ENST00000455631 TTC9BQ8N6N2 239 aa25.3■■□□□ 1.64
PTPRA-208ENST00000455631 PSMG2Q969U7 264 aa25.3■■□□□ 1.64
PTPRA-208ENST00000455631 TMEM209Q96SK2 561 aa25.3■■□□□ 1.64
PTPRA-208ENST00000455631 ASB3Q9Y575 518 aa25.3■■□□□ 1.64
PTPRA-208ENST00000455631 FAM208BQ5VWN6 2430 aa25.29■■□□□ 1.64
PTPRA-208ENST00000455631 MTMR11A4FU01 709 aa25.29■■□□□ 1.64
PTPRA-208ENST00000455631 C1QTNF9BB2RNN3 333 aa25.29■■□□□ 1.64
PTPRA-208ENST00000455631 SOAT2O75908 522 aa25.29■■□□□ 1.64
PTPRA-208ENST00000455631 C1QTNF9P0C862 333 aa25.29■■□□□ 1.64
PTPRA-208ENST00000455631 CACNB1Q02641 598 aaPredicted RBP25.29■■□□□ 1.64
PTPRA-208ENST00000455631 COL9A2Q14055 689 aaPredicted RBP25.29■■□□□ 1.64
PTPRA-208ENST00000455631 CENPPQ6IPU0 288 aa25.29■■□□□ 1.64
PTPRA-208ENST00000455631 TCEAL6Q6IPX3 200 aa25.29■■□□□ 1.64
PTPRA-208ENST00000455631 UNQ6494/PRO21346Q6UXR6 183 aa25.29■■□□□ 1.64
PTPRA-208ENST00000455631 DAW1Q8N136 415 aa25.29■■□□□ 1.64
PTPRA-208ENST00000455631 ATAD1Q8NBU5 361 aa25.29■■□□□ 1.64
PTPRA-208ENST00000455631 TCEAL3Q969E4 200 aa25.29■■□□□ 1.64
PTPRA-208ENST00000455631 DRC1Q96MC2 740 aa25.29■■□□□ 1.64
PTPRA-208ENST00000455631 VPS45Q9NRW7 570 aa25.29■■□□□ 1.64
PTPRA-208ENST00000455631 RBM19Q9Y4C8 960 aaKnown RBP25.29■■□□□ 1.64
PTPRA-208ENST00000455631 FRYQ5TBA9 3013 aa25.29■■□□□ 1.64
PTPRA-208ENST00000455631 SLC16A4O15374 487 aa25.28■■□□□ 1.64
PTPRA-208ENST00000455631 ATG13O75143 517 aa25.28■■□□□ 1.64
PTPRA-208ENST00000455631 AKAP3O75969 853 aa25.28■■□□□ 1.64
PTPRA-208ENST00000455631 CXCL8P10145 99 aa25.28■■□□□ 1.64
PTPRA-208ENST00000455631 MCM2P49736 904 aa25.28■■□□□ 1.64
PTPRA-208ENST00000455631 NOVA1P51513 510 aaKnown RBP25.28■■□□□ 1.64
PTPRA-208ENST00000455631 CYP4F8P98187 520 aa25.28■■□□□ 1.64
PTPRA-208ENST00000455631 GUCY1B3Q02153 619 aa25.28■■□□□ 1.64
PTPRA-208ENST00000455631 GRSF1Q12849 480 aaKnown RBP eCLIP25.28■■□□□ 1.64
PTPRA-208ENST00000455631 SAFBQ15424 915 aaKnown RBP eCLIP25.28■■□□□ 1.64
PTPRA-208ENST00000455631 DSTYKQ6XUX3 929 aa25.28■■□□□ 1.64
PTPRA-208ENST00000455631 ITIH5Q86UX2 942 aa25.28■■□□□ 1.64
PTPRA-208ENST00000455631 SMG9Q9H0W8 520 aaKnown RBP25.28■■□□□ 1.64
PTPRA-208ENST00000455631 THG1LQ9NWX6 298 aaKnown RBP25.28■■□□□ 1.64
PTPRA-208ENST00000455631 ATG2BQ96BY7 2078 aa25.27■■□□□ 1.64
PTPRA-208ENST00000455631 TOM1L1O75674 476 aa25.27■■□□□ 1.64
PTPRA-208ENST00000455631 LRPAP1P30533 357 aa25.27■■□□□ 1.64
PTPRA-208ENST00000455631 STRN3Q13033 797 aa25.27■■□□□ 1.64
PTPRA-208ENST00000455631 ORC2Q13416 577 aaPredicted RBP25.27■■□□□ 1.64
PTPRA-208ENST00000455631 PTPAQ15257 358 aa25.27■■□□□ 1.64
PTPRA-208ENST00000455631 OVOS1Q6IE37 1185 aa25.27■■□□□ 1.64
PTPRA-208ENST00000455631 FSTL4Q6MZW2 842 aa25.27■■□□□ 1.64
PTPRA-208ENST00000455631 KIF12Q96FN5 646 aa25.27■■□□□ 1.64
PTPRA-208ENST00000455631 GCNAQ96QF7 691 aa25.27■■□□□ 1.64
PTPRA-208ENST00000455631 EDEM2Q9BV94 578 aa25.27■■□□□ 1.64
PTPRA-208ENST00000455631 TASP1Q9H6P5 420 aa25.27■■□□□ 1.64
PTPRA-208ENST00000455631 LRWD1Q9UFC0 647 aa25.27■■□□□ 1.64
PTPRA-208ENST00000455631 ZMIZ1Q9ULJ6 1067 aa25.27■■□□□ 1.64
PTPRA-208ENST00000455631 BAHCC1Q9P281 2608 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms