RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 CCKARP32238 428 aa3.07□□□□□ -1.92
LINC02540-201ENST00000455554 ATP8B2P98198 1209 aa3.07□□□□□ -1.92
LINC02540-201ENST00000455554 MC2RQ01718 297 aa3.07□□□□□ -1.92
LINC02540-201ENST00000455554 MIDNQ504T8 468 aa3.07□□□□□ -1.92
LINC02540-201ENST00000455554 DALRD3Q5D0E6 543 aaKnown RBP3.07□□□□□ -1.92
LINC02540-201ENST00000455554 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
LINC02540-201ENST00000455554 CEP85Q6P2H3 762 aa3.07□□□□□ -1.92
LINC02540-201ENST00000455554 C16orf86Q6ZW13 317 aa3.07□□□□□ -1.92
LINC02540-201ENST00000455554 KCNK18Q7Z418 384 aa3.07□□□□□ -1.92
LINC02540-201ENST00000455554 KRT73Q86Y46 540 aa3.07□□□□□ -1.92
LINC02540-201ENST00000455554 CMIPQ8IY22 773 aa3.07□□□□□ -1.92
LINC02540-201ENST00000455554 ZGPATQ8N5A5 531 aaKnown RBP3.07□□□□□ -1.92
LINC02540-201ENST00000455554 TGFBRAP1Q8WUH2 860 aa3.07□□□□□ -1.92
LINC02540-201ENST00000455554 ALG8Q9BVK2 526 aa3.07□□□□□ -1.92
LINC02540-201ENST00000455554 C11orf54Q9H0W9 315 aaPredicted RBP3.07□□□□□ -1.92
LINC02540-201ENST00000455554 VPS16Q9H269 839 aa3.07□□□□□ -1.92
LINC02540-201ENST00000455554 EBF3Q9H4W6 596 aa3.07□□□□□ -1.92
LINC02540-201ENST00000455554 MANSC1Q9H8J5 431 aa3.07□□□□□ -1.92
LINC02540-201ENST00000455554 FANCLQ9NW38 375 aa3.07□□□□□ -1.92
LINC02540-201ENST00000455554 IGKV2D-30A0A075B6S6 120 aa3.06□□□□□ -1.92
LINC02540-201ENST00000455554 MYMKA6NI61 221 aa3.06□□□□□ -1.92
LINC02540-201ENST00000455554 KCNU1A8MYU2 1149 aa3.06□□□□□ -1.92
LINC02540-201ENST00000455554 TISP43B9A030 160 aa3.06□□□□□ -1.92
LINC02540-201ENST00000455554 NEMP1O14524 444 aa3.06□□□□□ -1.92
LINC02540-201ENST00000455554 JTBO76095 146 aa3.06□□□□□ -1.92
LINC02540-201ENST00000455554 RHOP08100 348 aa3.06□□□□□ -1.92
LINC02540-201ENST00000455554 NHLRC4P0CG21 123 aaPredicted RBP3.06□□□□□ -1.92
LINC02540-201ENST00000455554 BPIP17213 487 aa3.06□□□□□ -1.92
LINC02540-201ENST00000455554 SFPQP23246 707 aaKnown RBP eCLIP3.06□□□□□ -1.92
LINC02540-201ENST00000455554 SLC6A4P31645 630 aa3.06□□□□□ -1.92
LINC02540-201ENST00000455554 ID4P47928 161 aa3.06□□□□□ -1.92
LINC02540-201ENST00000455554 PLAC9Q5JTB6 97 aa3.06□□□□□ -1.92
LINC02540-201ENST00000455554 PXDC1Q5TGL8 231 aa3.06□□□□□ -1.92
LINC02540-201ENST00000455554 SMRP1Q8NCR6 262 aa3.06□□□□□ -1.92
LINC02540-201ENST00000455554 LEO1Q8WVC0 666 aaPredicted RBP3.06□□□□□ -1.92
LINC02540-201ENST00000455554 USP7Q93009 1102 aa3.06□□□□□ -1.92
LINC02540-201ENST00000455554 RFKQ969G6 155 aa3.06□□□□□ -1.92
LINC02540-201ENST00000455554 DRC1Q96MC2 740 aa3.06□□□□□ -1.92
LINC02540-201ENST00000455554 MYBBP1AQ9BQG0 1328 aaKnown RBP3.06□□□□□ -1.92
LINC02540-201ENST00000455554 TMEM79Q9BSE2 394 aa3.06□□□□□ -1.92
LINC02540-201ENST00000455554 PRSS22Q9GZN4 317 aa3.06□□□□□ -1.92
LINC02540-201ENST00000455554 SH3BP4Q9P0V3 963 aa3.06□□□□□ -1.92
LINC02540-201ENST00000455554 A0A087X0B3 334 aa3.05□□□□□ -1.92
LINC02540-201ENST00000455554 E7ENX8 843 aa3.05□□□□□ -1.92
LINC02540-201ENST00000455554 ZFXP17010 805 aaPredicted RBP3.05□□□□□ -1.92
LINC02540-201ENST00000455554 NPTX2P47972 431 aa3.05□□□□□ -1.92
LINC02540-201ENST00000455554 ZNF134P52741 427 aa3.05□□□□□ -1.92
LINC02540-201ENST00000455554 CTXN1P60606 82 aa3.05□□□□□ -1.92
LINC02540-201ENST00000455554 TAP2Q03519 686 aa3.05□□□□□ -1.92
LINC02540-201ENST00000455554 PIGFQ07326 219 aa3.05□□□□□ -1.92
LINC02540-201ENST00000455554 RABEP1Q15276 862 aa3.05□□□□□ -1.92
LINC02540-201ENST00000455554 TOR2AQ5JU69 321 aa3.05□□□□□ -1.92
LINC02540-201ENST00000455554 UTP14CQ5TAP6 766 aaKnown RBP3.05□□□□□ -1.92
LINC02540-201ENST00000455554 PRAMEF17Q5VTA0 474 aa3.05□□□□□ -1.92
LINC02540-201ENST00000455554 TMPRSS9Q7Z410 1059 aa3.05□□□□□ -1.92
LINC02540-201ENST00000455554 CFAP52Q8N1V2 620 aa3.05□□□□□ -1.92
LINC02540-201ENST00000455554 NSUN7Q8NE18 718 aaKnown RBP3.05□□□□□ -1.92
LINC02540-201ENST00000455554 SREK1Q8WXA9 508 aaKnown RBP3.05□□□□□ -1.92
LINC02540-201ENST00000455554 APPBP2Q92624 585 aa3.05□□□□□ -1.92
LINC02540-201ENST00000455554 REPS1Q96D71 796 aa3.05□□□□□ -1.92
LINC02540-201ENST00000455554 MFSD3Q96ES6 412 aa3.05□□□□□ -1.92
LINC02540-201ENST00000455554 KLHL32Q96NJ5 620 aa3.05□□□□□ -1.92
LINC02540-201ENST00000455554 ORAI2Q96SN7 254 aa3.05□□□□□ -1.92
LINC02540-201ENST00000455554 SERTAD4Q9NUC0 356 aa3.05□□□□□ -1.92
LINC02540-201ENST00000455554 EHD3Q9NZN3 535 aa3.05□□□□□ -1.92
LINC02540-201ENST00000455554 A0A0B4J269 797 aa3.04□□□□□ -1.92
LINC02540-201ENST00000455554 SMIM35A0A1B0GVV1 85 aa3.04□□□□□ -1.92
LINC02540-201ENST00000455554 GOLGA8AA7E2F4 631 aa3.04□□□□□ -1.92
LINC02540-201ENST00000455554 PRRT4C9JH25 899 aa3.04□□□□□ -1.92
LINC02540-201ENST00000455554 SMIM22K7EJ46 135 aa3.04□□□□□ -1.92
LINC02540-201ENST00000455554 MYO1FO00160 1098 aa3.04□□□□□ -1.92
LINC02540-201ENST00000455554 GRM6O15303 877 aa3.04□□□□□ -1.92
LINC02540-201ENST00000455554 MTHFD1P11586 935 aaKnown RBP3.04□□□□□ -1.92
LINC02540-201ENST00000455554 NDUFB7P17568 137 aa3.04□□□□□ -1.92
LINC02540-201ENST00000455554 SLC5A3P53794 718 aa3.04□□□□□ -1.92
LINC02540-201ENST00000455554 SRSF2Q01130 221 aaKnown RBP3.04□□□□□ -1.92
LINC02540-201ENST00000455554 TUBB3Q13509 450 aa3.04□□□□□ -1.92
LINC02540-201ENST00000455554 KIAA1161Q6NSJ0 714 aa3.04□□□□□ -1.92
LINC02540-201ENST00000455554 SLC29A4Q7RTT9 530 aa3.04□□□□□ -1.92
LINC02540-201ENST00000455554 ZNF551Q7Z340 670 aaPredicted RBP3.04□□□□□ -1.92
LINC02540-201ENST00000455554 FAM177A1Q8N128 213 aaPredicted RBP3.04□□□□□ -1.92
LINC02540-201ENST00000455554 DCBLD1Q8N8Z6 715 aa3.04□□□□□ -1.92
LINC02540-201ENST00000455554 OR2I1PQ8NGU4 316 aa3.04□□□□□ -1.92
LINC02540-201ENST00000455554 LMBR1Q8WVP7 490 aa3.04□□□□□ -1.92
LINC02540-201ENST00000455554 TBC1D5Q92609 795 aa3.04□□□□□ -1.92
LINC02540-201ENST00000455554 FKBP10Q96AY3 582 aa3.04□□□□□ -1.92
LINC02540-201ENST00000455554 LRIG1Q96JA1 1093 aa3.04□□□□□ -1.92
LINC02540-201ENST00000455554 TPSD1Q9BZJ3 242 aa3.04□□□□□ -1.92
LINC02540-201ENST00000455554 PLAAQ9Y263 795 aa3.04□□□□□ -1.92
LINC02540-201ENST00000455554 CYP2D7A0A087X1C5 515 aa3.03□□□□□ -1.92
LINC02540-201ENST00000455554 ZEB2O60315 1214 aa3.03□□□□□ -1.92
LINC02540-201ENST00000455554 SBK3P0C264 359 aa3.03□□□□□ -1.92
LINC02540-201ENST00000455554 FAM163BP0C2L3 166 aa3.03□□□□□ -1.92
LINC02540-201ENST00000455554 PCSK6P29122 969 aa3.03□□□□□ -1.92
LINC02540-201ENST00000455554 ARHGAP25P42331 645 aa3.03□□□□□ -1.92
LINC02540-201ENST00000455554 LINC00205P59089 165 aa3.03□□□□□ -1.92
LINC02540-201ENST00000455554 POU6F2P78424 691 aaPredicted RBP3.03□□□□□ -1.92
LINC02540-201ENST00000455554 BMPR2Q13873 1038 aa3.03□□□□□ -1.92
LINC02540-201ENST00000455554 DHCR24Q15392 516 aa3.03□□□□□ -1.92
LINC02540-201ENST00000455554 TRIP6Q15654 476 aaKnown RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms