RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 RHOT1Q8IXI2 618 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 VPS52Q8N1B4 723 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 SPATA33Q96N06 139 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 SYT17Q9BSW7 474 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 TEX13BQ9BXU2 312 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 CHMP2BQ9UQN3 213 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 IVNS1ABPQ9Y6Y0 642 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 FRMPD4Q14CM0 1322 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 DESP17661 470 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 CPA2P48052 419 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 FMO1Q01740 532 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 BYSLQ13895 437 aaKnown RBP11.8□□□□□ -0.52
DDR1-240ENST00000454612 EML3Q32P44 896 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 ANKRD20A3Q5VUR7 823 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 ZNF662Q6ZS27 426 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 CEP128Q6ZU80 1094 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 LRRC57Q8N9N7 239 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 SPDYE1Q8NFV5 336 aaPredicted RBP11.8□□□□□ -0.52
DDR1-240ENST00000454612 TRIM33Q9UPN9 1127 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 NEU2Q9Y3R4 380 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 UBE4BO95155 1302 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 FAM187AA6NFU0 413 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 DRP2Q13474 957 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 HADHQ16836 314 aaKnown RBP11.8□□□□□ -0.52
DDR1-240ENST00000454612 ZNF667Q5HYK9 610 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 DCAF12L1Q5VU92 463 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 IL31Q6EBC2 164 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 MOXD1Q6UVY6 613 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 TMEM35BQ8NCS4 154 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 OR6B3Q8NGW1 331 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 CCDC110Q8TBZ0 833 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 RNF34Q969K3 372 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 MCUR1Q96AQ8 359 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 SNF8Q96H20 258 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 PPP1R36Q96LQ0 422 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 RNF181Q9P0P0 153 aa11.8□□□□□ -0.52
DDR1-240ENST00000454612 ZC3H4Q9UPT8 1303 aaKnown RBP11.79□□□□□ -0.52
DDR1-240ENST00000454612 VWA5AO00534 786 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 ZNF862O60290 1169 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 BAG2O95816 211 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 CDH6P55285 790 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 CYP24A1Q07973 514 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 DHX34Q14147 1143 aaKnown RBP11.79□□□□□ -0.52
DDR1-240ENST00000454612 CRYMQ14894 314 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 SPDYE2Q495Y8 402 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 COBLL1Q53SF7 1204 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 SLC30A9Q6PML9 568 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 FAM71DQ8N9W8 422 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 ATL2Q8NHH9 583 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 MAML1Q92585 1016 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 ABTB1Q969K4 478 aaPredicted RBP11.79□□□□□ -0.52
DDR1-240ENST00000454612 ANKRD36BP1Q96IX9 119 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 CEP41Q9BYV8 373 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 SHCBP1LQ9BZQ2 653 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 TXNDC16Q9P2K2 825 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 PCDHB2Q9Y5E7 798 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 TCF7P36402 384 aaPredicted RBP11.79□□□□□ -0.52
DDR1-240ENST00000454612 MSH2P43246 934 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 IL9RQ01113 521 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 FSTL1Q12841 308 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 FAM47CQ5HY64 1035 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 KDELC2Q7Z4H8 507 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 PSPC1Q8WXF1 523 aaKnown RBP11.79□□□□□ -0.52
DDR1-240ENST00000454612 VCXQ9H320 206 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 ECT2Q9H8V3 914 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 RPF1Q9H9Y2 349 aaKnown RBP11.79□□□□□ -0.52
DDR1-240ENST00000454612 A1CFQ9NQ94 594 aaKnown RBP11.79□□□□□ -0.52
DDR1-240ENST00000454612 SMYD2Q9NRG4 433 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 GTF3C4Q9UKN8 822 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 POLIQ9UNA4 740 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 NFKBIEO00221 500 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 KIAA0391O15091 583 aaKnown RBP11.79□□□□□ -0.52
DDR1-240ENST00000454612 INHBAP08476 426 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 KRT3P12035 628 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 ADORA2BP29275 332 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 SFNP31947 248 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 PRKCIP41743 596 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 MFSD7Q6UXD7 560 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 FBXO16Q8IX29 292 aaPredicted RBP11.79□□□□□ -0.52
DDR1-240ENST00000454612 DCLK2Q8N568 766 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 TMEM161BQ8NDZ6 487 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 DCPSQ96C86 337 aaKnown RBP11.79□□□□□ -0.52
DDR1-240ENST00000454612 CPB2Q96IY4 423 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 GBP5Q96PP8 586 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 DNPEPQ9ULA0 475 aa11.79□□□□□ -0.52
DDR1-240ENST00000454612 NRXN2Q9P2S2 1712 aa11.78□□□□□ -0.52
DDR1-240ENST00000454612 CFAP69A5D8W1 941 aa11.78□□□□□ -0.52
DDR1-240ENST00000454612 SHOX2O60902 331 aaPredicted RBP11.78□□□□□ -0.52
DDR1-240ENST00000454612 ATP2A2P16615 1042 aaKnown RBP11.78□□□□□ -0.52
DDR1-240ENST00000454612 MAGEA4P43358 317 aa11.78□□□□□ -0.52
DDR1-240ENST00000454612 TAS2R40P59535 323 aa11.78□□□□□ -0.52
DDR1-240ENST00000454612 NFX1Q12986 1120 aaKnown RBP11.78□□□□□ -0.52
DDR1-240ENST00000454612 XKR3Q5GH77 459 aa11.78□□□□□ -0.52
DDR1-240ENST00000454612 HYIQ5T013 277 aa11.78□□□□□ -0.52
DDR1-240ENST00000454612 PRCCQ92733 491 aaPredicted RBP11.78□□□□□ -0.52
DDR1-240ENST00000454612 HES6Q96HZ4 224 aa11.78□□□□□ -0.52
DDR1-240ENST00000454612 ADPGKQ9BRR6 497 aa11.78□□□□□ -0.52
DDR1-240ENST00000454612 NPHS2Q9NP85 383 aa11.78□□□□□ -0.52
DDR1-240ENST00000454612 ABCF3Q9NUQ8 709 aa11.78□□□□□ -0.52
DDR1-240ENST00000454612 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms