RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 PPP3CAQ08209 521 aa30.11■■■□□ 2.41
SMARCC1-203ENST00000454240 RAB33AQ14088 237 aa30.11■■■□□ 2.41
SMARCC1-203ENST00000454240 SV2AQ7L0J3 742 aa30.11■■■□□ 2.41
SMARCC1-203ENST00000454240 PALB2Q86YC2 1186 aa30.11■■■□□ 2.41
SMARCC1-203ENST00000454240 FBXL5Q9UKA1 691 aa30.11■■■□□ 2.41
SMARCC1-203ENST00000454240 DSEQ9UL01 958 aa30.11■■■□□ 2.41
SMARCC1-203ENST00000454240 CDY1Q9Y6F8 540 aa30.11■■■□□ 2.41
SMARCC1-203ENST00000454240 TGM5O43548 720 aa30.1■■■□□ 2.41
SMARCC1-203ENST00000454240 PHACTR2O75167 634 aa30.1■■■□□ 2.41
SMARCC1-203ENST00000454240 GLUD1P00367 558 aa30.1■■■□□ 2.41
SMARCC1-203ENST00000454240 PTMSP20962 102 aa30.1■■■□□ 2.41
SMARCC1-203ENST00000454240 BIRC3Q13489 604 aa30.1■■■□□ 2.41
SMARCC1-203ENST00000454240 CTXN3Q4LDR2 81 aa30.1■■■□□ 2.41
SMARCC1-203ENST00000454240 OVOS1Q6IE37 1185 aa30.1■■■□□ 2.41
SMARCC1-203ENST00000454240 ZNF280DQ6N043 979 aa30.1■■■□□ 2.41
SMARCC1-203ENST00000454240 UNC80Q8N2C7 3258 aa30.1■■■□□ 2.41
SMARCC1-203ENST00000454240 H3BQ06 376 aaPredicted RBP30.09■■■□□ 2.41
SMARCC1-203ENST00000454240 VNN1O95497 513 aa30.09■■■□□ 2.41
SMARCC1-203ENST00000454240 STAU1O95793 577 aaKnown RBP30.09■■■□□ 2.41
SMARCC1-203ENST00000454240 ATICP31939 592 aa30.09■■■□□ 2.41
SMARCC1-203ENST00000454240 GTF2H1P32780 548 aa30.09■■■□□ 2.41
SMARCC1-203ENST00000454240 MYL6P60660 151 aa30.09■■■□□ 2.41
SMARCC1-203ENST00000454240 TRPC3Q13507 836 aa30.09■■■□□ 2.41
SMARCC1-203ENST00000454240 LEXMQ3ZCV2 418 aa30.09■■■□□ 2.41
SMARCC1-203ENST00000454240 ANKRD54Q6NXT1 300 aa30.09■■■□□ 2.41
SMARCC1-203ENST00000454240 FRMD5Q7Z6J6 570 aa30.09■■■□□ 2.41
SMARCC1-203ENST00000454240 ATXN2LQ8WWM7 1075 aaKnown RBP30.09■■■□□ 2.41
SMARCC1-203ENST00000454240 SRRTQ9BXP5 876 aaKnown RBP30.09■■■□□ 2.41
SMARCC1-203ENST00000454240 OXCT2Q9BYC2 517 aaPredicted RBP30.09■■■□□ 2.41
SMARCC1-203ENST00000454240 XYLT2Q9H1B5 865 aa30.09■■■□□ 2.41
SMARCC1-203ENST00000454240 METTL14Q9HCE5 456 aaKnown RBP30.09■■■□□ 2.41
SMARCC1-203ENST00000454240 ARMCX3Q9UH62 379 aaPredicted RBP30.09■■■□□ 2.41
SMARCC1-203ENST00000454240 DACH1Q9UI36 760 aa30.09■■■□□ 2.41
SMARCC1-203ENST00000454240 SNX9Q9Y5X1 595 aa30.09■■■□□ 2.41
SMARCC1-203ENST00000454240 GCLMP48507 274 aa30.08■■■□□ 2.41
SMARCC1-203ENST00000454240 NCOA4Q13772 614 aa30.08■■■□□ 2.41
SMARCC1-203ENST00000454240 CT47A1Q5JQC4 288 aaPredicted RBP30.08■■■□□ 2.41
SMARCC1-203ENST00000454240 WSCD1Q658N2 575 aa30.08■■■□□ 2.41
SMARCC1-203ENST00000454240 LIMS2Q7Z4I7 341 aa30.08■■■□□ 2.41
SMARCC1-203ENST00000454240 HDAC7Q8WUI4 952 aa30.08■■■□□ 2.41
SMARCC1-203ENST00000454240 VRTNQ9H8Y1 702 aa30.08■■■□□ 2.41
SMARCC1-203ENST00000454240 ERCC5P28715 1186 aaPredicted RBP30.07■■■□□ 2.4
SMARCC1-203ENST00000454240 KLHL40Q2TBA0 621 aa30.07■■■□□ 2.4
SMARCC1-203ENST00000454240 SYCE2Q6PIF2 218 aa30.07■■■□□ 2.4
SMARCC1-203ENST00000454240 DPH6Q7L8W6 267 aa30.07■■■□□ 2.4
SMARCC1-203ENST00000454240 METTL23Q86XA0 190 aa30.07■■■□□ 2.4
SMARCC1-203ENST00000454240 TOP6BLQ8N6T0 577 aa30.07■■■□□ 2.4
SMARCC1-203ENST00000454240 SYAP1Q96A49 352 aaPredicted RBP30.07■■■□□ 2.4
SMARCC1-203ENST00000454240 TMEM8AQ9HCN3 771 aa30.07■■■□□ 2.4
SMARCC1-203ENST00000454240 DZANK1Q9NVP4 752 aa30.07■■■□□ 2.4
SMARCC1-203ENST00000454240 L1RE1Q9UN81 338 aa30.07■■■□□ 2.4
SMARCC1-203ENST00000454240 HUS1O60921 280 aa30.06■■■□□ 2.4
SMARCC1-203ENST00000454240 FGFR1OPO95684 399 aaKnown RBP30.06■■■□□ 2.4
SMARCC1-203ENST00000454240 GNA14O95837 355 aa30.06■■■□□ 2.4
SMARCC1-203ENST00000454240 HOXB8P17481 243 aaPredicted RBP30.06■■■□□ 2.4
SMARCC1-203ENST00000454240 ROR1Q01973 937 aa30.06■■■□□ 2.4
SMARCC1-203ENST00000454240 AAK1Q2M2I8 961 aa30.06■■■□□ 2.4
SMARCC1-203ENST00000454240 CAVIN1Q6NZI2 390 aaKnown RBP30.06■■■□□ 2.4
SMARCC1-203ENST00000454240 SASS6Q6UVJ0 657 aa30.06■■■□□ 2.4
SMARCC1-203ENST00000454240 PHF6Q8IWS0 365 aaKnown RBP eCLIP30.06■■■□□ 2.4
SMARCC1-203ENST00000454240 TMEM86AQ8N2M4 240 aa30.06■■■□□ 2.4
SMARCC1-203ENST00000454240 PDCL2Q8N4E4 241 aa30.06■■■□□ 2.4
SMARCC1-203ENST00000454240 GADD45GIP1Q8TAE8 222 aaPredicted RBP30.06■■■□□ 2.4
SMARCC1-203ENST00000454240 PLEKHA4Q9H4M7 779 aa30.06■■■□□ 2.4
SMARCC1-203ENST00000454240 MAN1C1Q9NR34 630 aa30.06■■■□□ 2.4
SMARCC1-203ENST00000454240 DPP7Q9UHL4 492 aa30.06■■■□□ 2.4
SMARCC1-203ENST00000454240 CD207Q9UJ71 328 aa30.06■■■□□ 2.4
SMARCC1-203ENST00000454240 WDR27A2RRH5 827 aa30.05■■■□□ 2.4
SMARCC1-203ENST00000454240 OR6C75A6NL08 312 aa30.05■■■□□ 2.4
SMARCC1-203ENST00000454240 STX10O60499 249 aa30.05■■■□□ 2.4
SMARCC1-203ENST00000454240 ABLIM3O94929 683 aa30.05■■■□□ 2.4
SMARCC1-203ENST00000454240 SPATA31D3P0C874 917 aa30.05■■■□□ 2.4
SMARCC1-203ENST00000454240 MARSP56192 900 aaKnown RBP30.05■■■□□ 2.4
SMARCC1-203ENST00000454240 MRPS5P82675 430 aaKnown RBP30.05■■■□□ 2.4
SMARCC1-203ENST00000454240 SOWAHAQ2M3V2 549 aa30.05■■■□□ 2.4
SMARCC1-203ENST00000454240 CCDC40Q4G0X9 1142 aa30.05■■■□□ 2.4
SMARCC1-203ENST00000454240 SPATA31D4Q6ZUB0 917 aa30.05■■■□□ 2.4
SMARCC1-203ENST00000454240 SMRP1Q8NCR6 262 aa30.05■■■□□ 2.4
SMARCC1-203ENST00000454240 ZNF461Q8TAF7 563 aa30.05■■■□□ 2.4
SMARCC1-203ENST00000454240 SPATA18Q8TC71 538 aa30.05■■■□□ 2.4
SMARCC1-203ENST00000454240 SLC35C1Q96A29 364 aa30.05■■■□□ 2.4
SMARCC1-203ENST00000454240 RTP3Q9BQQ7 232 aa30.05■■■□□ 2.4
SMARCC1-203ENST00000454240 S1PR5Q9H228 398 aa30.05■■■□□ 2.4
SMARCC1-203ENST00000454240 FBXW11Q9UKB1 542 aa30.05■■■□□ 2.4
SMARCC1-203ENST00000454240 HLA-DRAP01903 254 aa30.04■■■□□ 2.4
SMARCC1-203ENST00000454240 SGSM1Q2NKQ1 1148 aa30.04■■■□□ 2.4
SMARCC1-203ENST00000454240 WDR72Q3MJ13 1102 aa30.04■■■□□ 2.4
SMARCC1-203ENST00000454240 DCAF17Q5H9S7 520 aaPredicted RBP30.04■■■□□ 2.4
SMARCC1-203ENST00000454240 TCERG1LQ5VWI1 586 aa30.04■■■□□ 2.4
SMARCC1-203ENST00000454240 KRT39Q6A163 491 aa30.04■■■□□ 2.4
SMARCC1-203ENST00000454240 KREMEN2Q8NCW0 462 aa30.04■■■□□ 2.4
SMARCC1-203ENST00000454240 MMRN2Q9H8L6 949 aa30.04■■■□□ 2.4
SMARCC1-203ENST00000454240 CLUL1Q15846 466 aa30.03■■■□□ 2.4
SMARCC1-203ENST00000454240 ZNF699Q32M78 642 aa30.03■■■□□ 2.4
SMARCC1-203ENST00000454240 THEM5Q8N1Q8 247 aa30.03■■■□□ 2.4
SMARCC1-203ENST00000454240 TAS1R2Q8TE23 839 aa30.03■■■□□ 2.4
SMARCC1-203ENST00000454240 TAF4BQ92750 862 aa30.03■■■□□ 2.4
SMARCC1-203ENST00000454240 ASB2Q96Q27 587 aa30.03■■■□□ 2.4
SMARCC1-203ENST00000454240 GABRDO14764 452 aa30.02■■■□□ 2.4
SMARCC1-203ENST00000454240 PIK3CAP42336 1068 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms