RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 PMS2P11Q13670 270 aa4.54□□□□□ -1.68
HMGB1P15-201ENST00000453854 C3orf38Q5JPI3 329 aa4.54□□□□□ -1.68
HMGB1P15-201ENST00000453854 ZNF529Q6P280 563 aa4.54□□□□□ -1.68
HMGB1P15-201ENST00000453854 LIX1LQ8IVB5 337 aa4.54□□□□□ -1.68
HMGB1P15-201ENST00000453854 NEIL1Q96FI4 390 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P15-201ENST00000453854 ZNF512Q96ME7 567 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P15-201ENST00000453854 TTLL2Q9BWV7 592 aa4.54□□□□□ -1.68
HMGB1P15-201ENST00000453854 LSM14BQ9BX40 385 aaKnown RBP4.54□□□□□ -1.68
HMGB1P15-201ENST00000453854 PACSIN1Q9BY11 444 aa4.54□□□□□ -1.68
HMGB1P15-201ENST00000453854 NELFAQ9H3P2 528 aa4.54□□□□□ -1.68
HMGB1P15-201ENST00000453854 FBXO34Q9NWN3 711 aa4.54□□□□□ -1.68
HMGB1P15-201ENST00000453854 ZNF69Q9UC07 566 aa4.54□□□□□ -1.68
HMGB1P15-201ENST00000453854 CDC23Q9UJX2 597 aa4.54□□□□□ -1.68
HMGB1P15-201ENST00000453854 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.54□□□□□ -1.68
HMGB1P15-201ENST00000453854 SCINQ9Y6U3 715 aa4.54□□□□□ -1.68
HMGB1P15-201ENST00000453854 A0A0U1RQG5 324 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 A0A1W2PRX2 142 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 CLCA1A8K7I4 914 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 ADAMTS3O15072 1205 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 KIAA0391O15091 583 aaKnown RBP4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 PRICKLE3O43900 615 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 NBNO60934 754 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 POMCP01189 267 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 CR2P20023 1033 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 FGFR2P21802 821 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 PHKA1P46020 1223 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 NOMO3P69849 1222 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 SLC13A2Q13183 592 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 CTBP1Q13363 440 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 UBXN2BQ14CS0 331 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 CSRP2Q16527 193 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 MPEG1Q2M385 716 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 SLC35G1Q2M3R5 365 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 FAM214AQ32MH5 1076 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 ARL13BQ3SXY8 428 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 PRR16Q569H4 304 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 METTL24Q5JXM2 366 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 KLHDC7AQ5VTJ3 777 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 ANO1Q5XXA6 986 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 DRICH1Q6PGQ1 229 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 FAM111BQ6SJ93 734 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 UBE3BQ7Z3V4 1068 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 SP8Q8IXZ3 490 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 CCDC33Q8N5R6 958 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 ANKRD42Q8N9B4 389 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 MYRIPQ8NFW9 859 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 DDX17Q92841 729 aaKnown RBP4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 SCAMP4Q969E2 229 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 GDF15Q99988 308 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 DPYSL5Q9BPU6 564 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 GSTO2Q9H4Y5 243 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 SERHLQ9NQF3 203 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 SACM1LQ9NTJ5 587 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 SRRDQ9UH36 339 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 SLC45A2Q9UMX9 530 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 PLEKHM1Q9Y4G2 1056 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 RPS6KL1Q9Y6S9 549 aa4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 MORC2Q9Y6X9 1032 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P15-201ENST00000453854 AREL1O15033 823 aa4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 NPHP1O15259 732 aa4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 TBC1D4O60343 1298 aa4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 MT-ND5P03915 603 aa4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 ANXA2P07355 339 aaKnown RBP4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 HARSP12081 509 aaKnown RBP4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 IL1R1P14778 569 aa4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 TECP42680 631 aa4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 KCNJ5P48544 419 aa4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 EPHB4P54760 987 aa4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 PPP2CBP62714 309 aa4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 PPP2CAP67775 309 aa4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 POU6F2P78424 691 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 RAB32Q13637 225 aa4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 MFSD5Q6N075 450 aa4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 TLDC1Q6P9B6 456 aa4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 BORAQ6PGQ7 559 aa4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 CATSPERGQ6ZRH7 1159 aa4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 PPP1R32Q7Z5V6 425 aa4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 PLEKHH3Q7Z736 793 aa4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 LGI4Q8N135 537 aa4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 PAF1Q8N7H5 531 aa4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 ZFP28Q8NHY6 868 aa4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 CYP2W1Q8TAV3 490 aa4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 SNX22Q96L94 193 aa4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 STK33Q9BYT3 514 aa4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 AGO4Q9HCK5 861 aaKnown RBP4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 SLAMF7Q9NQ25 335 aa4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 A1CFQ9NQ94 594 aaKnown RBP4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 LUZP4Q9P127 313 aa4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 PCDHGB2Q9Y5G2 931 aa4.52□□□□□ -1.69
HMGB1P15-201ENST00000453854 NESP48681 1621 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 MBD3L4A6NDZ8 208 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 MBD3L3A6NE82 208 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 PYCARD-AS1I3L0S3 204 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 UNC5CO95185 931 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 CHEK2O96017 543 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 GNAI2P04899 355 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 FDXRP22570 491 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 EEF1GP26641 437 aaKnown RBP4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 RPS19P39019 145 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms