RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 ADAM7Q9H2U9 754 aa16.9■□□□□ 0.3
VCX3B-204ENST00000453306 TSPY26PQ9H489 355 aa16.9■□□□□ 0.3
VCX3B-204ENST00000453306 DZANK1Q9NVP4 752 aa16.9■□□□□ 0.3
VCX3B-204ENST00000453306 DPP3Q9NY33 737 aa16.9■□□□□ 0.3
VCX3B-204ENST00000453306 UBQLN1Q9UMX0 589 aaKnown RBP16.9■□□□□ 0.3
VCX3B-204ENST00000453306 PRG3Q9Y2Y8 225 aaPredicted RBP16.9■□□□□ 0.3
VCX3B-204ENST00000453306 HCFC2Q9Y5Z7 792 aa16.9■□□□□ 0.3
VCX3B-204ENST00000453306 KIF4AO95239 1232 aa16.89■□□□□ 0.29
VCX3B-204ENST00000453306 TNNI1P19237 187 aa16.89■□□□□ 0.29
VCX3B-204ENST00000453306 MTHFRP42898 656 aa16.89■□□□□ 0.29
VCX3B-204ENST00000453306 ENPEPQ07075 957 aa16.89■□□□□ 0.29
VCX3B-204ENST00000453306 SURF1Q15526 300 aa16.89■□□□□ 0.29
VCX3B-204ENST00000453306 DUOXA2Q1HG44 320 aa16.89■□□□□ 0.29
VCX3B-204ENST00000453306 CCDC40Q4G0X9 1142 aa16.89■□□□□ 0.29
VCX3B-204ENST00000453306 MIIPQ5JXC2 388 aa16.89■□□□□ 0.29
VCX3B-204ENST00000453306 C9orf57Q5W0N0 161 aa16.89■□□□□ 0.29
VCX3B-204ENST00000453306 TAS1R1Q7RTX1 841 aa16.89■□□□□ 0.29
VCX3B-204ENST00000453306 SEMA4DQ92854 862 aa16.89■□□□□ 0.29
VCX3B-204ENST00000453306 TSPAN18Q96SJ8 248 aa16.89■□□□□ 0.29
VCX3B-204ENST00000453306 TMEM175Q9BSA9 504 aa16.89■□□□□ 0.29
VCX3B-204ENST00000453306 KCNJ18B7U540 433 aa16.88■□□□□ 0.29
VCX3B-204ENST00000453306 CLASP2O75122 1294 aaKnown RBP16.88■□□□□ 0.29
VCX3B-204ENST00000453306 ALDH2P05091 517 aa16.88■□□□□ 0.29
VCX3B-204ENST00000453306 OR1G1P47890 313 aa16.88■□□□□ 0.29
VCX3B-204ENST00000453306 KCNJ12Q14500 433 aa16.88■□□□□ 0.29
VCX3B-204ENST00000453306 ZACNQ401N2 412 aa16.88■□□□□ 0.29
VCX3B-204ENST00000453306 TCP11X2Q5H9J9 407 aa16.88■□□□□ 0.29
VCX3B-204ENST00000453306 NT5DC4Q86YG4 428 aa16.88■□□□□ 0.29
VCX3B-204ENST00000453306 UBALD2Q8IYN6 164 aa16.88■□□□□ 0.29
VCX3B-204ENST00000453306 VPS52Q8N1B4 723 aa16.88■□□□□ 0.29
VCX3B-204ENST00000453306 PRSS33Q8NF86 280 aa16.88■□□□□ 0.29
VCX3B-204ENST00000453306 BEST2Q8NFU1 509 aa16.88■□□□□ 0.29
VCX3B-204ENST00000453306 ASIC4Q96FT7 647 aa16.88■□□□□ 0.29
VCX3B-204ENST00000453306 FNBP1Q96RU3 617 aa16.88■□□□□ 0.29
VCX3B-204ENST00000453306 RBSNQ9H1K0 784 aa16.88■□□□□ 0.29
VCX3B-204ENST00000453306 METTL14Q9HCE5 456 aaKnown RBP16.88■□□□□ 0.29
VCX3B-204ENST00000453306 SLC38A7Q9NVC3 462 aa16.88■□□□□ 0.29
VCX3B-204ENST00000453306 TECTAO75443 2155 aa16.87■□□□□ 0.29
VCX3B-204ENST00000453306 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.87■□□□□ 0.29
VCX3B-204ENST00000453306 I3L4J1 428 aa16.87■□□□□ 0.29
VCX3B-204ENST00000453306 PODXLO00592 558 aa16.87■□□□□ 0.29
VCX3B-204ENST00000453306 FGFR1OPO95684 399 aaKnown RBP16.87■□□□□ 0.29
VCX3B-204ENST00000453306 GNA14O95837 355 aa16.87■□□□□ 0.29
VCX3B-204ENST00000453306 ITGB3P05106 788 aa16.87■□□□□ 0.29
VCX3B-204ENST00000453306 KRT13P13646 458 aa16.87■□□□□ 0.29
VCX3B-204ENST00000453306 POLR2BP30876 1174 aaKnown RBP16.87■□□□□ 0.29
VCX3B-204ENST00000453306 BRCC3P46736 316 aa16.87■□□□□ 0.29
VCX3B-204ENST00000453306 NUBP1P53384 320 aa16.87■□□□□ 0.29
VCX3B-204ENST00000453306 MTMR3Q13615 1198 aa16.87■□□□□ 0.29
VCX3B-204ENST00000453306 KRT31Q15323 416 aa16.87■□□□□ 0.29
VCX3B-204ENST00000453306 TPD52L1Q16890 204 aaPredicted RBP16.87■□□□□ 0.29
VCX3B-204ENST00000453306 DCAF17Q5H9S7 520 aaPredicted RBP16.87■□□□□ 0.29
VCX3B-204ENST00000453306 IER5LQ5T953 404 aa16.87■□□□□ 0.29
VCX3B-204ENST00000453306 DCLRE1AQ6PJP8 1040 aa16.87■□□□□ 0.29
VCX3B-204ENST00000453306 DDX53Q86TM3 631 aaKnown RBP16.87■□□□□ 0.29
VCX3B-204ENST00000453306 PPFIBP1Q86W92 1011 aa16.87■□□□□ 0.29
VCX3B-204ENST00000453306 CREBRFQ8IUR6 639 aa16.87■□□□□ 0.29
VCX3B-204ENST00000453306 RNF214Q8ND24 703 aa16.87■□□□□ 0.29
VCX3B-204ENST00000453306 FAM200AQ8TCP9 573 aa16.87■□□□□ 0.29
VCX3B-204ENST00000453306 TAS1R2Q8TE23 839 aa16.87■□□□□ 0.29
VCX3B-204ENST00000453306 HASPINQ8TF76 798 aa16.87■□□□□ 0.29
VCX3B-204ENST00000453306 IGSF21Q96ID5 467 aa16.87■□□□□ 0.29
VCX3B-204ENST00000453306 FAM193BQ96PV7 902 aaPredicted RBP16.87■□□□□ 0.29
VCX3B-204ENST00000453306 GPR62Q9BZJ7 368 aa16.87■□□□□ 0.29
VCX3B-204ENST00000453306 NAT10Q9H0A0 1025 aaKnown RBP16.87■□□□□ 0.29
VCX3B-204ENST00000453306 ZBP1Q9H171 429 aa16.87■□□□□ 0.29
VCX3B-204ENST00000453306 XYLT2Q9H1B5 865 aa16.87■□□□□ 0.29
VCX3B-204ENST00000453306 MMRN2Q9H8L6 949 aa16.87■□□□□ 0.29
VCX3B-204ENST00000453306 TAB2Q9NYJ8 693 aa16.87■□□□□ 0.29
VCX3B-204ENST00000453306 AGAP1Q9UPQ3 857 aa16.87■□□□□ 0.29
VCX3B-204ENST00000453306 FAN1Q9Y2M0 1017 aa16.87■□□□□ 0.29
VCX3B-204ENST00000453306 IRAK3Q9Y616 596 aa16.87■□□□□ 0.29
VCX3B-204ENST00000453306 WDFY4Q6ZS81 3184 aa16.87■□□□□ 0.29
VCX3B-204ENST00000453306 LRRC10BA6NIK2 292 aa16.86■□□□□ 0.29
VCX3B-204ENST00000453306 CTSAP10619 480 aa16.86■□□□□ 0.29
VCX3B-204ENST00000453306 SP100P23497 879 aaPredicted RBP16.86■□□□□ 0.29
VCX3B-204ENST00000453306 RPL9P32969 192 aaKnown RBP16.86■□□□□ 0.29
VCX3B-204ENST00000453306 MYL6P60660 151 aa16.86■□□□□ 0.29
VCX3B-204ENST00000453306 KCNH2Q12809 1159 aa16.86■□□□□ 0.29
VCX3B-204ENST00000453306 HSP90AA2PQ14568 343 aaPredicted RBP16.86■□□□□ 0.29
VCX3B-204ENST00000453306 ATAT1Q5SQI0 421 aa16.86■□□□□ 0.29
VCX3B-204ENST00000453306 DPY19L2P1Q6NXN4 242 aa16.86■□□□□ 0.29
VCX3B-204ENST00000453306 RNF168Q8IYW5 571 aaPredicted RBP16.86■□□□□ 0.29
VCX3B-204ENST00000453306 KREMEN2Q8NCW0 462 aa16.86■□□□□ 0.29
VCX3B-204ENST00000453306 LMO3Q8TAP4 145 aa16.86■□□□□ 0.29
VCX3B-204ENST00000453306 CACTINQ8WUQ7 758 aaKnown RBP16.86■□□□□ 0.29
VCX3B-204ENST00000453306 POMKQ9H5K3 350 aa16.86■□□□□ 0.29
VCX3B-204ENST00000453306 LIMA1Q9UHB6 759 aaKnown RBP16.86■□□□□ 0.29
VCX3B-204ENST00000453306 SORCS3Q9UPU3 1222 aa16.86■□□□□ 0.29
VCX3B-204ENST00000453306 TRIOO75962 3097 aa16.86■□□□□ 0.29
VCX3B-204ENST00000453306 B3GAT3O94766 335 aa16.85■□□□□ 0.29
VCX3B-204ENST00000453306 HLA-DRAP01903 254 aa16.85■□□□□ 0.29
VCX3B-204ENST00000453306 TMEM191BP0C7N4 346 aa16.85■□□□□ 0.29
VCX3B-204ENST00000453306 AVPR2P30518 371 aa16.85■□□□□ 0.29
VCX3B-204ENST00000453306 GTF2H1P32780 548 aa16.85■□□□□ 0.29
VCX3B-204ENST00000453306 AARSP49588 968 aaKnown RBP eCLIP16.85■□□□□ 0.29
VCX3B-204ENST00000453306 LILRA4P59901 499 aa16.85■□□□□ 0.29
VCX3B-204ENST00000453306 RARS2Q5T160 578 aaKnown RBP16.85■□□□□ 0.29
VCX3B-204ENST00000453306 TCERG1LQ5VWI1 586 aa16.85■□□□□ 0.29
VCX3B-204ENST00000453306 KIAA1841Q6NSI8 718 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms