RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 GLRA4Q5JXX5 417 aa8.14□□□□□ -1.11
RIF1-206ENST00000453091 FAM182AQ5T1J6 154 aa8.14□□□□□ -1.11
RIF1-206ENST00000453091 SLC47A2Q86VL8 602 aa8.14□□□□□ -1.11
RIF1-206ENST00000453091 FSD1LQ9BXM9 530 aa8.14□□□□□ -1.11
RIF1-206ENST00000453091 ING2Q9H160 280 aa8.14□□□□□ -1.11
RIF1-206ENST00000453091 SNX9Q9Y5X1 595 aa8.14□□□□□ -1.11
RIF1-206ENST00000453091 AKAP10O43572 662 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 CCDC22O60826 627 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 GGPS1O95749 300 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 SARSP49591 514 aaKnown RBP8.13□□□□□ -1.11
RIF1-206ENST00000453091 PLCB4Q15147 1175 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 EMC1Q8N766 993 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 TTC13Q8NBP0 860 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 MGEA5O60502 916 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 MEGF6O75095 1541 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 PGK2P07205 417 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 ETS1P14921 441 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 ZNF200P98182 395 aaPredicted RBP8.13□□□□□ -1.11
RIF1-206ENST00000453091 ZNF844Q08AG5 666 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 NR1H3Q13133 447 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 GIT2Q14161 759 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 PDCD2Q16342 344 aaPredicted RBP8.13□□□□□ -1.11
RIF1-206ENST00000453091 DENND5BQ6ZUT9 1274 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 C16orf86Q6ZW13 317 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 ANO5Q75V66 913 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 AENQ8WTP8 325 aaKnown RBP8.13□□□□□ -1.11
RIF1-206ENST00000453091 SLC5A5Q92911 643 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 TATDN2Q93075 761 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 NMD3Q96D46 503 aaKnown RBP8.13□□□□□ -1.11
RIF1-206ENST00000453091 ERLEC1Q96DZ1 483 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 SGSM3Q96HU1 749 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 TBC1D22BQ9NU19 505 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 UPP2O95045 317 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 ZSCAN5DPP0CG00 497 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 GNAT1P11488 350 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 KLC1Q07866 573 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 SBK1Q52WX2 424 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 RCOR2Q8IZ40 523 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 CYGBQ8WWM9 190 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 MTA3Q9BTC8 594 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 TMEM121Q9BTD3 319 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 TLR10Q9BXR5 811 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 AGPAT3Q9NRZ7 376 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 TAC1P20366 129 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 SERPINB5P36952 375 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 MAPK7Q13164 816 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 MED21Q13503 144 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 HACE1Q8IYU2 909 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 OR6P1Q8NGX9 317 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 KRT76Q01546 638 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 NCOA4Q13772 614 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 DIS3LQ8TF46 1054 aaKnown RBP8.13□□□□□ -1.11
RIF1-206ENST00000453091 TMEM120AQ9BXJ8 343 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 TASP1Q9H6P5 420 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 DDX56Q9NY93 547 aaKnown RBP8.13□□□□□ -1.11
RIF1-206ENST00000453091 EME2A4GXA9 379 aaPredicted RBP8.13□□□□□ -1.11
RIF1-206ENST00000453091 CDH16O75309 829 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 MYL2P10916 166 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 TSPY1Q01534 308 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 SZRD1Q7Z422 152 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 CDKL3Q8IVW4 592 aaPredicted RBP8.13□□□□□ -1.11
RIF1-206ENST00000453091 NDUFAF2Q8N183 169 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 PARD3BQ8TEW8 1205 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 NSL1Q96IY1 281 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 ATP9AO75110 1047 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 RPL10AP62906 217 aaKnown RBP8.13□□□□□ -1.11
RIF1-206ENST00000453091 PKN2Q16513 984 aaKnown RBP8.13□□□□□ -1.11
RIF1-206ENST00000453091 C11orf74Q86VG3 221 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 E2F7Q96AV8 911 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 CEP19Q96LK0 163 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 PABPC3Q9H361 631 aaKnown RBP8.13□□□□□ -1.11
RIF1-206ENST00000453091 ZFATQ9P243 1243 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 HACL1Q9UJ83 578 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 RAB21Q9UL25 225 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 PNMA3Q9UL41 463 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 ADGRB3O60242 1522 aa8.13□□□□□ -1.11
RIF1-206ENST00000453091 TCRBV5S4A2TA0A5A2 114 aa8.12□□□□□ -1.11
RIF1-206ENST00000453091 FAM86B2P0C5J1 330 aa8.12□□□□□ -1.11
RIF1-206ENST00000453091 EPHB2P29323 1055 aa8.12□□□□□ -1.11
RIF1-206ENST00000453091 GLRBP48167 497 aa8.12□□□□□ -1.11
RIF1-206ENST00000453091 IL17AQ16552 155 aa8.12□□□□□ -1.11
RIF1-206ENST00000453091 FUT11Q495W5 492 aa8.12□□□□□ -1.11
RIF1-206ENST00000453091 ARMCX1Q9P291 453 aa8.12□□□□□ -1.11
RIF1-206ENST00000453091 PLOD1Q02809 727 aaPredicted RBP8.12□□□□□ -1.11
RIF1-206ENST00000453091 USP10Q14694 798 aaKnown RBP8.12□□□□□ -1.11
RIF1-206ENST00000453091 LBRQ14739 615 aaKnown RBP8.12□□□□□ -1.11
RIF1-206ENST00000453091 SHROOM1Q2M3G4 852 aaPredicted RBP8.12□□□□□ -1.11
RIF1-206ENST00000453091 KIAA1841Q6NSI8 718 aa8.12□□□□□ -1.11
RIF1-206ENST00000453091 TAS2R42Q7RTR8 314 aa8.12□□□□□ -1.11
RIF1-206ENST00000453091 CREG2Q8IUH2 290 aa8.12□□□□□ -1.11
RIF1-206ENST00000453091 RNF148Q8N7C7 305 aa8.12□□□□□ -1.11
RIF1-206ENST00000453091 APOL2Q9BQE5 337 aa8.12□□□□□ -1.11
RIF1-206ENST00000453091 ACAD9Q9H845 621 aa8.12□□□□□ -1.11
RIF1-206ENST00000453091 CAAP1Q9H8G2 361 aa8.12□□□□□ -1.11
RIF1-206ENST00000453091 TUFT1Q9NNX1 390 aa8.12□□□□□ -1.11
RIF1-206ENST00000453091 MAP2K7O14733 419 aa8.12□□□□□ -1.11
RIF1-206ENST00000453091 NR3C2P08235 984 aa8.12□□□□□ -1.11
RIF1-206ENST00000453091 DYNC1I2Q13409 638 aaKnown RBP8.12□□□□□ -1.11
RIF1-206ENST00000453091 MCPH1Q8NEM0 835 aa8.12□□□□□ -1.11
RIF1-206ENST00000453091 RNF139Q8WU17 664 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms