RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 CCDC188H7C350 402 aa11.45□□□□□ -0.58
PKP4-206ENST00000452162 VNN1O95497 513 aa11.45□□□□□ -0.58
PKP4-206ENST00000452162 SYF2O95926 243 aaKnown RBP11.45□□□□□ -0.58
PKP4-206ENST00000452162 LDHAP00338 332 aaKnown RBP11.45□□□□□ -0.58
PKP4-206ENST00000452162 CHRNA1P02708 482 aa11.45□□□□□ -0.58
PKP4-206ENST00000452162 CYP1A2P05177 515 aa11.45□□□□□ -0.58
PKP4-206ENST00000452162 CARSP49589 748 aaKnown RBP11.45□□□□□ -0.58
PKP4-206ENST00000452162 CLCN3P51790 818 aa11.45□□□□□ -0.58
PKP4-206ENST00000452162 GUCY2DQ02846 1103 aa11.45□□□□□ -0.58
PKP4-206ENST00000452162 MKRN4PQ13434 485 aaPredicted RBP11.45□□□□□ -0.58
PKP4-206ENST00000452162 IER5Q5VY09 327 aa11.45□□□□□ -0.58
PKP4-206ENST00000452162 CDCA2Q69YH5 1023 aaPredicted RBP11.45□□□□□ -0.58
PKP4-206ENST00000452162 EFCAB12Q6NXP0 572 aa11.45□□□□□ -0.58
PKP4-206ENST00000452162 PRPF31Q8WWY3 499 aaKnown RBP11.45□□□□□ -0.58
PKP4-206ENST00000452162 CASKIN2Q8WXE0 1202 aa11.45□□□□□ -0.58
PKP4-206ENST00000452162 CGRRF1Q99675 332 aa11.45□□□□□ -0.58
PKP4-206ENST00000452162 AP1M1Q9BXS5 423 aa11.45□□□□□ -0.58
PKP4-206ENST00000452162 UBE2OQ9C0C9 1292 aaKnown RBP11.45□□□□□ -0.58
PKP4-206ENST00000452162 CARD9Q9H257 536 aa11.45□□□□□ -0.58
PKP4-206ENST00000452162 EPB41L5Q9HCM4 733 aa11.45□□□□□ -0.58
PKP4-206ENST00000452162 ANKFY1Q9P2R3 1169 aa11.45□□□□□ -0.58
PKP4-206ENST00000452162 COLQQ9Y215 455 aaPredicted RBP11.45□□□□□ -0.58
PKP4-206ENST00000452162 MAGEB2O15479 319 aa11.45□□□□□ -0.58
PKP4-206ENST00000452162 GAS2O43903 313 aaKnown RBP11.45□□□□□ -0.58
PKP4-206ENST00000452162 NBNO60934 754 aa11.45□□□□□ -0.58
PKP4-206ENST00000452162 TNNI1P19237 187 aa11.45□□□□□ -0.58
PKP4-206ENST00000452162 PPIGQ13427 754 aaKnown RBP eCLIP11.45□□□□□ -0.588e-8■□□□□ 10
PKP4-206ENST00000452162 ZPBP2Q6X784 338 aa11.45□□□□□ -0.58
PKP4-206ENST00000452162 RPAINQ86UA6 219 aa11.45□□□□□ -0.58
PKP4-206ENST00000452162 LINC01465Q8N7H1 131 aa11.45□□□□□ -0.58
PKP4-206ENST00000452162 ZBTB9Q96C00 473 aa11.45□□□□□ -0.58
PKP4-206ENST00000452162 ALG6Q9Y672 507 aa11.45□□□□□ -0.58
PKP4-206ENST00000452162 ESYT3A0FGR9 886 aa11.44□□□□□ -0.58
PKP4-206ENST00000452162 TTLL13PA6NNM8 815 aa11.44□□□□□ -0.58
PKP4-206ENST00000452162 AGPSO00116 658 aa11.44□□□□□ -0.58
PKP4-206ENST00000452162 KRIT1O00522 736 aa11.44□□□□□ -0.58
PKP4-206ENST00000452162 ATMINO43313 823 aaPredicted RBP11.44□□□□□ -0.58
PKP4-206ENST00000452162 FAM189A1O60320 539 aa11.44□□□□□ -0.58
PKP4-206ENST00000452162 ITGA4P13612 1032 aa11.44□□□□□ -0.58
PKP4-206ENST00000452162 PIK3CAP42336 1068 aa11.44□□□□□ -0.58
PKP4-206ENST00000452162 EFNA5P52803 228 aa11.44□□□□□ -0.58
PKP4-206ENST00000452162 GYS2P54840 703 aa11.44□□□□□ -0.58
PKP4-206ENST00000452162 PAK2Q13177 524 aa11.44□□□□□ -0.58
PKP4-206ENST00000452162 CLEC16AQ2KHT3 1053 aa11.44□□□□□ -0.58
PKP4-206ENST00000452162 HSP90B2PQ58FF3 399 aa11.44□□□□□ -0.58
PKP4-206ENST00000452162 C9orf50Q5SZB4 431 aa11.44□□□□□ -0.58
PKP4-206ENST00000452162 RSPH3Q86UC2 560 aa11.44□□□□□ -0.58
PKP4-206ENST00000452162 ALG3Q92685 438 aa11.44□□□□□ -0.58
PKP4-206ENST00000452162 PPP1R16BQ96T49 567 aa11.44□□□□□ -0.58
PKP4-206ENST00000452162 IL23AQ9NPF7 189 aa11.44□□□□□ -0.58
PKP4-206ENST00000452162 GTF3C4Q9UKN8 822 aa11.44□□□□□ -0.58
PKP4-206ENST00000452162 FAN1Q9Y2M0 1017 aa11.44□□□□□ -0.58
PKP4-206ENST00000452162 MIF4GDA9UHW6 222 aaKnown RBP11.43□□□□□ -0.58
PKP4-206ENST00000452162 CAND2O75155 1236 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 VTNP04004 478 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 KRT5P13647 590 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 ACO1P21399 889 aaKnown RBP11.43□□□□□ -0.58
PKP4-206ENST00000452162 BMP8BP34820 402 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 MRPS6P82932 125 aaKnown RBP11.43□□□□□ -0.58
PKP4-206ENST00000452162 MGAT3Q09327 533 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 LAMTOR4Q0VGL1 99 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 WDR44Q5JSH3 913 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 FAM26DQ5JW98 314 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 ACAD10Q6JQN1 1059 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 EIF1ADQ8N9N8 165 aaKnown RBP11.43□□□□□ -0.58
PKP4-206ENST00000452162 TSEN2Q8NCE0 465 aaKnown RBP11.43□□□□□ -0.58
PKP4-206ENST00000452162 TCP11Q8WWU5 503 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 RPS6KC1Q96S38 1066 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 PLEKHA4Q9H4M7 779 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 SLITRK6Q9H5Y7 841 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 APOBEC3GQ9HC16 384 aaKnown RBP11.43□□□□□ -0.58
PKP4-206ENST00000452162 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.43□□□□□ -0.58
PKP4-206ENST00000452162 VPS18Q9P253 973 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 NFU1Q9UMS0 254 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 CDY2AQ9Y6F7 541 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 SZT2Q5T011 3432 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 SART1O43290 800 aaKnown RBP11.43□□□□□ -0.58
PKP4-206ENST00000452162 CLSTN1O94985 981 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 CALCAP01258 141 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 FGGP02679 453 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 GGCXP38435 758 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 BIRC3Q13489 604 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 SHHQ15465 462 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 TMEM240Q5SV17 173 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 SPOPLQ6IQ16 392 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 ZNF365Q70YC5 407 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 BRSK2Q8IWQ3 736 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 EXOC8Q8IYI6 725 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 OR5B17Q8NGF7 314 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 CD101Q93033 1021 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 ZNF653Q96CK0 615 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 ZNF668Q96K58 619 aaPredicted RBP11.43□□□□□ -0.58
PKP4-206ENST00000452162 RNPC3Q96LT9 517 aaKnown RBP11.43□□□□□ -0.58
PKP4-206ENST00000452162 NUP85Q9BW27 656 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 MRPL4Q9BYD3 311 aaKnown RBP11.43□□□□□ -0.58
PKP4-206ENST00000452162 DDX47Q9H0S4 455 aaKnown RBP11.43□□□□□ -0.58
PKP4-206ENST00000452162 CDHR5Q9HBB8 845 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 CHORDC1Q9UHD1 332 aaPredicted RBP11.43□□□□□ -0.58
PKP4-206ENST00000452162 ADAM21Q9UKJ8 722 aa11.43□□□□□ -0.58
PKP4-206ENST00000452162 GOLGA6BA6NDN3 693 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms