RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 LIG4P49917 911 aa11.84□□□□□ -0.51
USP1-204ENST00000452143 EPHB3P54753 998 aa11.84□□□□□ -0.51
USP1-204ENST00000452143 NRLP54845 237 aa11.84□□□□□ -0.51
USP1-204ENST00000452143 MTAPQ13126 283 aa11.84□□□□□ -0.51
USP1-204ENST00000452143 GPR17Q13304 367 aa11.84□□□□□ -0.51
USP1-204ENST00000452143 MYBPC2Q14324 1141 aa11.84□□□□□ -0.51
USP1-204ENST00000452143 SEZ6Q53EL9 994 aa11.84□□□□□ -0.51
USP1-204ENST00000452143 MCTP1Q6DN14 999 aa11.84□□□□□ -0.51
USP1-204ENST00000452143 HAUS6Q7Z4H7 955 aa11.84□□□□□ -0.51
USP1-204ENST00000452143 USP37Q86T82 979 aa11.84□□□□□ -0.51
USP1-204ENST00000452143 SPNS2Q8IVW8 549 aa11.84□□□□□ -0.51
USP1-204ENST00000452143 MFSD6LQ8IWD5 586 aa11.84□□□□□ -0.51
USP1-204ENST00000452143 DCLK2Q8N568 766 aa11.84□□□□□ -0.51
USP1-204ENST00000452143 HAPLN2Q9GZV7 340 aa11.84□□□□□ -0.51
USP1-204ENST00000452143 SLITRK6Q9H5Y7 841 aa11.84□□□□□ -0.51
USP1-204ENST00000452143 HSFX1Q9UBD0 423 aa11.84□□□□□ -0.51
USP1-204ENST00000452143 NDRG2Q9UN36 371 aaKnown RBP11.84□□□□□ -0.51
USP1-204ENST00000452143 ARNTLO00327 626 aa11.83□□□□□ -0.52
USP1-204ENST00000452143 NRG2O14511 850 aaPredicted RBP11.83□□□□□ -0.52
USP1-204ENST00000452143 ZNF263O14978 683 aa11.83□□□□□ -0.52
USP1-204ENST00000452143 OGTO15294 1046 aa11.83□□□□□ -0.52
USP1-204ENST00000452143 FGF19O95750 216 aa11.83□□□□□ -0.52
USP1-204ENST00000452143 ADRB2P07550 413 aa11.83□□□□□ -0.52
USP1-204ENST00000452143 ODC1P11926 461 aa11.83□□□□□ -0.52
USP1-204ENST00000452143 TDGF1P13385 188 aa11.83□□□□□ -0.52
USP1-204ENST00000452143 CCR3P51677 355 aa11.83□□□□□ -0.52
USP1-204ENST00000452143 ZNF131P52739 623 aa11.83□□□□□ -0.52
USP1-204ENST00000452143 LMNB2Q03252 620 aa11.83□□□□□ -0.52
USP1-204ENST00000452143 FCHO2Q0JRZ9 810 aa11.83□□□□□ -0.52
USP1-204ENST00000452143 RABEP1Q15276 862 aa11.83□□□□□ -0.52
USP1-204ENST00000452143 TEAD2Q15562 447 aa11.83□□□□□ -0.52
USP1-204ENST00000452143 OVOS1Q6IE37 1185 aa11.83□□□□□ -0.52
USP1-204ENST00000452143 TMC8Q8IU68 726 aa11.83□□□□□ -0.52
USP1-204ENST00000452143 CD302Q8IX05 232 aa11.83□□□□□ -0.52
USP1-204ENST00000452143 HS6ST3Q8IZP7 471 aa11.83□□□□□ -0.52
USP1-204ENST00000452143 SHKBP1Q8TBC3 707 aa11.83□□□□□ -0.52
USP1-204ENST00000452143 FAM3CQ92520 227 aa11.83□□□□□ -0.52
USP1-204ENST00000452143 ZSWIM3Q96MP5 696 aa11.83□□□□□ -0.52
USP1-204ENST00000452143 REEP2Q9BRK0 252 aa11.83□□□□□ -0.52
USP1-204ENST00000452143 LRRC3Q9BY71 257 aa11.83□□□□□ -0.52
USP1-204ENST00000452143 TBX20Q9UMR3 447 aa11.83□□□□□ -0.52
USP1-204ENST00000452143 ASB3Q9Y575 518 aa11.83□□□□□ -0.52
USP1-204ENST00000452143 DENND4CQ5VZ89 1909 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 MTMR11A4FU01 709 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 HEPACAM2A8MVW5 462 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 PRR5-ARHGAP8B1AHC4 643 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 H3BQV1 296 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 K7ENM7 598 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 CHADO15335 359 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 VNN2O95498 520 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 TNFSF9P41273 254 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 VIPR2P41587 438 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 ALDH1A3P47895 512 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 ARHGAP8P85298 464 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 SPAG1Q07617 926 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 DUSP4Q13115 394 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 ENOX2Q16206 610 aaKnown RBP11.82□□□□□ -0.52
USP1-204ENST00000452143 ARSHQ5FYA8 562 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 SPATA1Q5VX52 437 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 CENPPQ6IPU0 288 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 TSSK4Q6SA08 328 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 DSTYKQ6XUX3 929 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 ITIH5Q86UX2 942 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 CSGALNACT1Q8TDX6 532 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 PSMG2Q969U7 264 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 CALML4Q96GE6 196 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 PGLYRP2Q96PD5 576 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 PLIN2Q99541 437 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 DNAJC25Q9H1X3 360 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 RPF1Q9H9Y2 349 aaKnown RBP11.82□□□□□ -0.52
USP1-204ENST00000452143 PARVGQ9HBI0 331 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 TIMM13Q9Y5L4 95 aaPredicted RBP11.82□□□□□ -0.52
USP1-204ENST00000452143 CHD8Q9HCK8 2581 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 SCN1AP35498 2009 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 NCANO14594 1321 aa11.82□□□□□ -0.52
USP1-204ENST00000452143 OBSL1O75147 1896 aa11.81□□□□□ -0.52
USP1-204ENST00000452143 A0A0B4J269 797 aa11.81□□□□□ -0.52
USP1-204ENST00000452143 NPHP3-ACAD11A0A0J9YXS1 232 aa11.81□□□□□ -0.52
USP1-204ENST00000452143 A0A1W2PRU2 124 aa11.81□□□□□ -0.52
USP1-204ENST00000452143 MED19A0JLT2 244 aaPredicted RBP11.81□□□□□ -0.52
USP1-204ENST00000452143 LACTBL1A8MY62 500 aa11.81□□□□□ -0.52
USP1-204ENST00000452143 TRAK2O60296 914 aa11.81□□□□□ -0.52
USP1-204ENST00000452143 FAM13AO94988 1023 aa11.81□□□□□ -0.52
USP1-204ENST00000452143 PAPSS2O95340 614 aaPredicted RBP11.81□□□□□ -0.52
USP1-204ENST00000452143 BMP15O95972 392 aa11.81□□□□□ -0.52
USP1-204ENST00000452143 OR4Q2P0C623 313 aa11.81□□□□□ -0.52
USP1-204ENST00000452143 CHRNB1P11230 501 aa11.81□□□□□ -0.52
USP1-204ENST00000452143 GJA1P17302 382 aa11.81□□□□□ -0.52
USP1-204ENST00000452143 UBA7P41226 1012 aa11.81□□□□□ -0.52
USP1-204ENST00000452143 LRRC32Q14392 662 aa11.81□□□□□ -0.52
USP1-204ENST00000452143 RSPO4Q2I0M5 234 aaPredicted RBP11.81□□□□□ -0.52
USP1-204ENST00000452143 C8orf34Q49A92 452 aa11.81□□□□□ -0.52
USP1-204ENST00000452143 ARMCX5Q6P1M9 558 aa11.81□□□□□ -0.52
USP1-204ENST00000452143 GPBP1Q86WP2 473 aa11.81□□□□□ -0.52
USP1-204ENST00000452143 YAF2Q8IY57 180 aa11.81□□□□□ -0.52
USP1-204ENST00000452143 MSTO1Q9BUK6 570 aa11.81□□□□□ -0.52
USP1-204ENST00000452143 CRISPLD1Q9H336 500 aa11.81□□□□□ -0.52
USP1-204ENST00000452143 C8orf33Q9H7E9 229 aaPredicted RBP11.81□□□□□ -0.52
USP1-204ENST00000452143 OBP2AQ9NY56 170 aa11.81□□□□□ -0.52
USP1-204ENST00000452143 GMEB2Q9UKD1 530 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms