RNA–Protein interactions for RNA: ENST00000451521.6

CCHCR1-208, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-208ENST00000451521 ZBTB10Q96DT7 871 aa16.29■□□□□ 0.2
CCHCR1-208ENST00000451521 DDX47Q9H0S4 455 aaKnown RBP16.29■□□□□ 0.2
CCHCR1-208ENST00000451521 CNOT8Q9UFF9 292 aaKnown RBP16.29■□□□□ 0.2
CCHCR1-208ENST00000451521 UMODL1Q5DID0 1318 aa16.28■□□□□ 0.2
CCHCR1-208ENST00000451521 GOLGA6L10A6NI86 522 aa16.28■□□□□ 0.2
CCHCR1-208ENST00000451521 SKAP2O75563 359 aaPredicted RBP16.28■□□□□ 0.2
CCHCR1-208ENST00000451521 GJB1P08034 283 aa16.28■□□□□ 0.2
CCHCR1-208ENST00000451521 EZRP15311 586 aaKnown RBP16.28■□□□□ 0.2
CCHCR1-208ENST00000451521 CLCN3P51790 818 aa16.28■□□□□ 0.2
CCHCR1-208ENST00000451521 CLNS1AP54105 237 aaKnown RBP16.28■□□□□ 0.2
CCHCR1-208ENST00000451521 CRYMQ14894 314 aa16.28■□□□□ 0.2
CCHCR1-208ENST00000451521 ATF7IP2Q5U623 682 aa16.28■□□□□ 0.2
CCHCR1-208ENST00000451521 TRIM72Q6ZMU5 477 aa16.28■□□□□ 0.2
CCHCR1-208ENST00000451521 TRIM11Q96F44 468 aa16.28■□□□□ 0.2
CCHCR1-208ENST00000451521 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.28■□□□□ 0.2
CCHCR1-208ENST00000451521 PCDHB4Q9Y5E5 795 aa16.28■□□□□ 0.2
CCHCR1-208ENST00000451521 CST3P01034 146 aaPredicted RBP16.28■□□□□ 0.2
CCHCR1-208ENST00000451521 CTNNA1P35221 906 aaKnown RBP16.28■□□□□ 0.2
CCHCR1-208ENST00000451521 SCTRP47872 440 aa16.28■□□□□ 0.2
CCHCR1-208ENST00000451521 ZNF132P52740 706 aa16.28■□□□□ 0.2
CCHCR1-208ENST00000451521 CUL1Q13616 776 aa16.28■□□□□ 0.2
CCHCR1-208ENST00000451521 E2F5Q15329 346 aa16.28■□□□□ 0.2
CCHCR1-208ENST00000451521 FAM187BQ17R55 369 aa16.28■□□□□ 0.2
CCHCR1-208ENST00000451521 SCARA3Q6AZY7 606 aa16.28■□□□□ 0.2
CCHCR1-208ENST00000451521 IFNLR1Q8IU57 520 aaPredicted RBP16.28■□□□□ 0.2
CCHCR1-208ENST00000451521 CCDC26Q8TAB7 109 aa16.28■□□□□ 0.2
CCHCR1-208ENST00000451521 SEC14L1Q92503 715 aa16.28■□□□□ 0.2
CCHCR1-208ENST00000451521 NLRP4Q96MN2 994 aa16.28■□□□□ 0.2
CCHCR1-208ENST00000451521 TNFSF13BQ9Y275 285 aa16.28■□□□□ 0.2
CCHCR1-208ENST00000451521 DOCK3Q8IZD9 2030 aa16.27■□□□□ 0.2
CCHCR1-208ENST00000451521 COL1A2P08123 1366 aa16.27■□□□□ 0.2
CCHCR1-208ENST00000451521 TMEM110-MUSTN1A8MSY1 372 aa16.27■□□□□ 0.2
CCHCR1-208ENST00000451521 SNAI1O95863 264 aaPredicted RBP16.27■□□□□ 0.2
CCHCR1-208ENST00000451521 HOXC6P09630 235 aa16.27■□□□□ 0.2
CCHCR1-208ENST00000451521 MYZAPP0CAP1 466 aa16.27■□□□□ 0.2
CCHCR1-208ENST00000451521 INSRRP14616 1297 aa16.27■□□□□ 0.2
CCHCR1-208ENST00000451521 IRX1P78414 480 aaPredicted RBP16.27■□□□□ 0.2
CCHCR1-208ENST00000451521 BYSLQ13895 437 aaKnown RBP16.27■□□□□ 0.2
CCHCR1-208ENST00000451521 DUOXA2Q1HG44 320 aa16.27■□□□□ 0.2
CCHCR1-208ENST00000451521 TLDC1Q6P9B6 456 aa16.27■□□□□ 0.2
CCHCR1-208ENST00000451521 TMEM270Q6UE05 265 aa16.27■□□□□ 0.2
CCHCR1-208ENST00000451521 SEC16BQ96JE7 1060 aa16.27■□□□□ 0.2
CCHCR1-208ENST00000451521 NR2E1Q9Y466 385 aa16.27■□□□□ 0.2
CCHCR1-208ENST00000451521 PCDHA3Q9Y5H8 950 aa16.27■□□□□ 0.2
CCHCR1-208ENST00000451521 MGAMO43451 1857 aa16.27■□□□□ 0.2
CCHCR1-208ENST00000451521 H0YGN5 161 aa16.27■□□□□ 0.19
CCHCR1-208ENST00000451521 MAGEB2O15479 319 aa16.27■□□□□ 0.19
CCHCR1-208ENST00000451521 B4GALT4O60513 344 aa16.27■□□□□ 0.19
CCHCR1-208ENST00000451521 HSPA6P17066 643 aa16.27■□□□□ 0.19
CCHCR1-208ENST00000451521 TMOD1P28289 359 aa16.27■□□□□ 0.19
CCHCR1-208ENST00000451521 HSD17B3P37058 310 aa16.27■□□□□ 0.19
CCHCR1-208ENST00000451521 MARCKSL1P49006 195 aa16.27■□□□□ 0.19
CCHCR1-208ENST00000451521 ZNF211Q13398 564 aaPredicted RBP16.27■□□□□ 0.19
CCHCR1-208ENST00000451521 LRIG3Q6UXM1 1119 aa16.27■□□□□ 0.19
CCHCR1-208ENST00000451521 RBBP8NLQ8NC74 664 aaPredicted RBP16.27■□□□□ 0.19
CCHCR1-208ENST00000451521 OR2W6PQ8NHA6 318 aa16.27■□□□□ 0.19
CCHCR1-208ENST00000451521 BTBD6Q96KE9 485 aa16.27■□□□□ 0.19
CCHCR1-208ENST00000451521 IMPG2Q9BZV3 1241 aa16.27■□□□□ 0.19
CCHCR1-208ENST00000451521 MTMR12Q9C0I1 747 aa16.27■□□□□ 0.19
CCHCR1-208ENST00000451521 MINDY3Q9H8M7 445 aa16.27■□□□□ 0.19
CCHCR1-208ENST00000451521 IFT122Q9HBG6 1241 aa16.27■□□□□ 0.19
CCHCR1-208ENST00000451521 NFS1Q9Y697 457 aa16.27■□□□□ 0.19
CCHCR1-208ENST00000451521 IVNS1ABPQ9Y6Y0 642 aa16.27■□□□□ 0.19
CCHCR1-208ENST00000451521 INO80B-WBP1J3KQ70 363 aa16.26■□□□□ 0.19
CCHCR1-208ENST00000451521 B4GALT5O43286 388 aa16.26■□□□□ 0.19
CCHCR1-208ENST00000451521 ECHS1P30084 290 aa16.26■□□□□ 0.19
CCHCR1-208ENST00000451521 GNA15P30679 374 aa16.26■□□□□ 0.19
CCHCR1-208ENST00000451521 HUNKP57058 714 aa16.26■□□□□ 0.19
CCHCR1-208ENST00000451521 XRCC4Q13426 336 aa16.26■□□□□ 0.19
CCHCR1-208ENST00000451521 GRB14Q14449 540 aa16.26■□□□□ 0.19
CCHCR1-208ENST00000451521 MON1BQ7L1V2 547 aa16.26■□□□□ 0.19
CCHCR1-208ENST00000451521 PPP1R13LQ8WUF5 828 aa16.26■□□□□ 0.19
CCHCR1-208ENST00000451521 CPA5Q8WXQ8 436 aa16.26■□□□□ 0.19
CCHCR1-208ENST00000451521 VCPIP1Q96JH7 1222 aa16.26■□□□□ 0.19
CCHCR1-208ENST00000451521 C16orf70Q9BSU1 422 aa16.26■□□□□ 0.19
CCHCR1-208ENST00000451521 INO80BQ9C086 356 aaPredicted RBP16.26■□□□□ 0.19
CCHCR1-208ENST00000451521 PRMT7Q9NVM4 692 aaPredicted RBP16.26■□□□□ 0.19
CCHCR1-208ENST00000451521 AMACRQ9UHK6 382 aa16.26■□□□□ 0.19
CCHCR1-208ENST00000451521 C5orf60A6NFR6 353 aa16.26■□□□□ 0.19
CCHCR1-208ENST00000451521 IQCF3P0C7M6 154 aa16.26■□□□□ 0.19
CCHCR1-208ENST00000451521 NOMO3P69849 1222 aa16.26■□□□□ 0.19
CCHCR1-208ENST00000451521 UAP1Q16222 522 aaPredicted RBP16.26■□□□□ 0.19
CCHCR1-208ENST00000451521 SGSM1Q2NKQ1 1148 aa16.26■□□□□ 0.19
CCHCR1-208ENST00000451521 ZNF568Q3ZCX4 644 aa16.26■□□□□ 0.19
CCHCR1-208ENST00000451521 LACTB2Q53H82 288 aaPredicted RBP16.26■□□□□ 0.19
CCHCR1-208ENST00000451521 EEF1DP3Q658K8 133 aa16.26■□□□□ 0.19
CCHCR1-208ENST00000451521 PPP1R2P3Q6NXS1 205 aa16.26■□□□□ 0.19
CCHCR1-208ENST00000451521 GPR142Q7Z601 462 aa16.26■□□□□ 0.19
CCHCR1-208ENST00000451521 AFG1LQ8WV93 481 aa16.26■□□□□ 0.19
CCHCR1-208ENST00000451521 MROH7Q68CQ1 1323 aa16.25■□□□□ 0.19
CCHCR1-208ENST00000451521 GOLGA6L10A0A0M3HER8 536 aa16.25■□□□□ 0.19
CCHCR1-208ENST00000451521 KLHL33A6NCF5 533 aa16.25■□□□□ 0.19
CCHCR1-208ENST00000451521 HOXD8P13378 290 aaPredicted RBP16.25■□□□□ 0.19
CCHCR1-208ENST00000451521 ADCYAP1R1P41586 468 aa16.25■□□□□ 0.19
CCHCR1-208ENST00000451521 NSFP46459 744 aaKnown RBP16.25■□□□□ 0.19
CCHCR1-208ENST00000451521 ZNF844Q08AG5 666 aa16.25■□□□□ 0.19
CCHCR1-208ENST00000451521 CACNA2D3Q8IZS8 1091 aa16.25■□□□□ 0.19
CCHCR1-208ENST00000451521 ZNF668Q96K58 619 aaPredicted RBP16.25■□□□□ 0.19
CCHCR1-208ENST00000451521 CDT1Q9H211 546 aa16.25■□□□□ 0.19
CCHCR1-208ENST00000451521 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms